Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1 156 5e-33 >seq1 Length=2015588 Score = 156 bits (172), Expect = 5e-33 Identities = 454/699 (65%), Gaps = 40/699 (6%) Strand=Plus/Minus Query 145604 TGAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGGGAAAGGGCCGGGGGC 145663 ||||||| || || |||| | |||| || ||||| |||| |||||| | || Sbjct 1720224 TGAAGTCGTCAATATCCTTGATATCCCTCCTAATGTTGAGCTTGGGGAAGGGCAGAGGAT 1720165 Query 145664 TCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCA 145723 || || ||| | ||||| || || ||||| | |||||||||||| || |||| Sbjct 1720164 CTCTCTCCAACTGCACCTTCAACGGTTCTACGTGATCCTTGTAGACGTGCGCATCGCCCA 1720105 Query 145724 GGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCA 145783 | || | | || || || ||| | || | | ||||| ||||||||||| || Sbjct 1720104 TGGCGAGCACCAATTCTTTAGGTTCGCAATCGGTCACCTTGGCGATCATGTAGGTCAACA 1720045 Query 145784 GGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACA 145843 | | |||||| || |||||||| || || |||| || | || | ||| |||||||||| Sbjct 1720044 GAGCGTAGCTAGCAATGTTGAACGGAACGCCCAAACCGAGATCGCACGAACGCTGGTACA 1719985 Query 145844 GCTGGCAGGAGAGCT---------CCCCGCC---------------------CGCCACGT 145873 || || ||||| | || |||| || ||| Sbjct 1719984 TTTGACACGAGAGGTGCTTTTTGCCCTCGCCGCGGGCGTAGGCGTCGAGGTTCGAGACGA 1719925 Query 145874 AGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTC 145932 ||||||| ||| | | |||||| |||||||| ||||| |||||| |||||| Sbjct 1719924 AGAACTGCGCAAAC-ATGTGGCACGGCGGCAGCGCCATCAGTTCGAGGTCCTTGGGGTTC 1719866 Query 145933 CAGGCGGTGAGGACGAGCCTCCTGCTCTCGG---GGTTCCTCTTGATCTCCCCTATCAGG 145989 |||||| |||| | || | | | |||| |||| ||||||||| | |||| Sbjct 1719865 CAGGCGCTGAGCAGGATGCGACGG---TCGGTAGGGTTGTTCTTGATCTTGTCGATCACT 1719809 Query 145990 TCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCC 146049 | ||| || || ||||| || || ||| | || | | | || |||| | || Sbjct 1719808 TGAGCGAGTTGATCGACGCCTTGACCGGTGTAGTTGGTATCGCAATCTGTGTACTCTGCG 1719749 Query 146050 CCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC-CCTGTGCCC 146108 || ||||| | ||| ||||| ||||||||||| |||| ||| || ||| | ||| Sbjct 1719748 CCAAAGTGTCGCCATTGGAAACCGTAGACGGGGCCCAAGTCGCC-TTCTCTGCGGTGAGA 1719690 Query 146109 CAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCT 146168 ||||||| | | ||||||| || || || |||||| |||||||||| | |||||| | Sbjct 1719689 CAGCCCGCGCGAGTCGAGGAATTCACGCGATCCGTTGCCGTCCCAGATGTGTACGCCCTT 1719630 Query 146169 CGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGAC 146228 | | |||| || || || || || | |||||||| ||||| ||||| || Sbjct 1719629 ATCTGTGAGCAGTTTCGAATCGGTCTTGCCAGCAACAAACCAGAGGAGCTCCTCGAGCAC 1719570 Query 146229 CCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAA 146267 || | | ||||| | ||||||||| ||||| || || Sbjct 1719569 GCCACGGAAAAAGACACGCTTGGTGGTGAGCAGAGGCAA 1719531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076291058760