Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq1 156 5e-33
>seq1
Length=2015588
Score = 156 bits (172), Expect = 5e-33
Identities = 454/699 (65%), Gaps = 40/699 (6%)
Strand=Plus/Minus
Query 145604 TGAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGGGAAAGGGCCGGGGGC 145663
||||||| || || |||| | |||| || ||||| |||| |||||| | ||
Sbjct 1720224 TGAAGTCGTCAATATCCTTGATATCCCTCCTAATGTTGAGCTTGGGGAAGGGCAGAGGAT 1720165
Query 145664 TCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCA 145723
|| || ||| | ||||| || || ||||| | |||||||||||| || ||||
Sbjct 1720164 CTCTCTCCAACTGCACCTTCAACGGTTCTACGTGATCCTTGTAGACGTGCGCATCGCCCA 1720105
Query 145724 GGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCA 145783
| || | | || || || ||| | || | | ||||| ||||||||||| ||
Sbjct 1720104 TGGCGAGCACCAATTCTTTAGGTTCGCAATCGGTCACCTTGGCGATCATGTAGGTCAACA 1720045
Query 145784 GGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACA 145843
| | |||||| || |||||||| || || |||| || | || | ||| ||||||||||
Sbjct 1720044 GAGCGTAGCTAGCAATGTTGAACGGAACGCCCAAACCGAGATCGCACGAACGCTGGTACA 1719985
Query 145844 GCTGGCAGGAGAGCT---------CCCCGCC---------------------CGCCACGT 145873
|| || ||||| | || |||| || |||
Sbjct 1719984 TTTGACACGAGAGGTGCTTTTTGCCCTCGCCGCGGGCGTAGGCGTCGAGGTTCGAGACGA 1719925
Query 145874 AGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTC 145932
||||||| ||| | | |||||| |||||||| ||||| |||||| ||||||
Sbjct 1719924 AGAACTGCGCAAAC-ATGTGGCACGGCGGCAGCGCCATCAGTTCGAGGTCCTTGGGGTTC 1719866
Query 145933 CAGGCGGTGAGGACGAGCCTCCTGCTCTCGG---GGTTCCTCTTGATCTCCCCTATCAGG 145989
|||||| |||| | || | | | |||| |||| ||||||||| | ||||
Sbjct 1719865 CAGGCGCTGAGCAGGATGCGACGG---TCGGTAGGGTTGTTCTTGATCTTGTCGATCACT 1719809
Query 145990 TCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCC 146049
| ||| || || ||||| || || ||| | || | | | || |||| | ||
Sbjct 1719808 TGAGCGAGTTGATCGACGCCTTGACCGGTGTAGTTGGTATCGCAATCTGTGTACTCTGCG 1719749
Query 146050 CCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC-CCTGTGCCC 146108
|| ||||| | ||| ||||| ||||||||||| |||| ||| || ||| | |||
Sbjct 1719748 CCAAAGTGTCGCCATTGGAAACCGTAGACGGGGCCCAAGTCGCC-TTCTCTGCGGTGAGA 1719690
Query 146109 CAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCT 146168
||||||| | | ||||||| || || || |||||| |||||||||| | |||||| |
Sbjct 1719689 CAGCCCGCGCGAGTCGAGGAATTCACGCGATCCGTTGCCGTCCCAGATGTGTACGCCCTT 1719630
Query 146169 CGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGAC 146228
| | |||| || || || || || | |||||||| ||||| ||||| ||
Sbjct 1719629 ATCTGTGAGCAGTTTCGAATCGGTCTTGCCAGCAACAAACCAGAGGAGCTCCTCGAGCAC 1719570
Query 146229 CCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAA 146267
|| | | ||||| | ||||||||| ||||| || ||
Sbjct 1719569 GCCACGGAAAAAGACACGCTTGGTGGTGAGCAGAGGCAA 1719531
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590076291058760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |