Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq11 140 3e-28 seq18 138 1e-27 seq1 91.5 1e-13 >seq11 Length=758843 Score = 140 bits (154), Expect = 3e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||||| || ||||| || || |||||||||||| | ||||| ||||| Sbjct 158488 ACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCA 158547 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || || ||||||||||||||||||| || || || |||||||||||| | Sbjct 158548 AGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCAGGTGGGATACCCTCCTTGTCTTGA 158607 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| ||||| | ||| ||||||| ||| | ||| || Sbjct 158608 ATCTTGGCCTTGACGTTGTCGATAGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTA 158667 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 ||||||||||| || ||||| ||||||||| Sbjct 158668 CCGGTCAGAGTCTTGACAAAGATCTGCATG 158697 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||||||||| |||| | || | ||| | || ||| || ||||||||||| ||| Sbjct 158240 TACCTCCGCGCAATCGAAGGACAAGGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGG 158299 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || ||||||||||| || |||||| | ||||| |||||||| || || | Sbjct 158300 AGAGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCAGGCG 158359 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || ||||||||||| || || ||| || | |||| ||||||| ||||| Sbjct 158360 GGATACCCTCCTTGTCCTGGATCTTGGCTTTCACATTGTCGATCGTGTCCGAAGACTCGA 158419 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | || | ||| || || || || || || || ||||||||||| Sbjct 158420 CCTCCAGTGTGATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 158468 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || ||||||||||| || | |||||| |||||| ||||| || ||||| | Sbjct 158049 CTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCATCCTCCAGCTGCTTACCAGCAAA 158108 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| | |||||||| |||||||| || ||||||||||| || || || || | Sbjct 158109 GATCAAGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 158168 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 || | || |||| | |||||| |||| || | || ||||| || || || || || Sbjct 158169 GTCAATAGTATCCGAGGACTCGACATCGAGCGTAATGGTCTTGCCCGTGAGCGTCTTGAC 158228 Query 118727 AAAAATCTGCAT 118738 ||| || ||||| Sbjct 158229 AAAGATTTGCAT 158240 >seq18 Length=577775 Score = 138 bits (152), Expect = 1e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || || || || || |||||||| ||| | |||||| ||||||||||| Sbjct 203634 GTGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCGAGCTG 203693 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 ||||| || |||| || |||||||||||||| || ||||| ||||||||| || || Sbjct 203694 CTTTCCTGCAAAGATAAGTCGCTGCTGATCGGGTGGGATGCCTTCCTTGTCTTGGATCTT 203753 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| |||||| | | ||||||||||| ||| | || |||||||| Sbjct 203754 GGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 203813 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || ||||| |||||||| Sbjct 203814 GAGAGTCTTAACAAAGATCTGCAT 203837 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 |||||| || | | ||| |||||||||| || ||||| || || || ||||| ||| Sbjct 203382 ACCTCCACGGAGACGCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGA 203441 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | || || || || ||||| || || || | || || |||||||||||||| || Sbjct 203442 AAGGGTACGGCCGTCTTCAAGCTGCTTGCCGGCAAAAATAAGCCGCTGCTGATCGGGTGG 203501 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 ||||| ||||||||| || || || || | |||| |||||| | | |||||| Sbjct 203502 GATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGAC 203561 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || | || |||||||||||||| || ||||| |||||||| Sbjct 203562 CTCGAGAGTGATGGTCTTGCCGGTCAGAGTCTTGACAAAGATCTGCAT 203609 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||||| || ||||| || || |||||||| || | ||| | ||||| Sbjct 283460 CACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGTGGCCGTCCTC 283519 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || |||||| |||| || |||||||| ||||| || |||||||||||||| Sbjct 283520 AAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTG 283579 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| |||||||| ||||||||||| || | || || Sbjct 283580 GATCTTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCGACCTCGAGAGTGATGGTCTT 283639 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || || || |||||||| Sbjct 283640 ACCCGTGAGGGTCTTAACGAAGATCTGCAT 283669 >seq1 Length=2015588 Score = 91.5 bits (100), Expect = 1e-13 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| || | ||||| ||||||||||| Sbjct 1818655 GTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCGTCCTCGAGCTG 1818596 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||| || |||||||| || || || |||||||||||||| ||| || Sbjct 1818595 CTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTT 1818536 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGT 118699 || || | | || |||||||| | ||| ||||||| ||| Sbjct 1818535 GGCCTTGACATTGTTGATGGTGTCCGAGGACTCCACCTCGAGGGT 1818491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830035175748