Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq11 125 6e-24
seq18 100 2e-16
>seq11
Length=758843
Score = 125 bits (138), Expect = 6e-24
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||||| |||||||||||||||||||||||||| || |||| | || ||||| ||
Sbjct 158037 GTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCATCCTCCAGCTG 158096
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| || || || ||||| ||||| ||||||||||| | ||||||||||||| || ||
Sbjct 158097 CTTACCAGCAAAGATCAAGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTT 158156
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||| || | | | ||| ||| || || | ||||| |||||||||||
Sbjct 158157 GGCCTTGACGTTGTCAATAGTATCCGAGGACTCGACATCGAGCGTAATGGTCTTGCCCGT 158216
Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336
|| ||||| ||||||||||||||
Sbjct 158217 GAGCGTCTTGACAAAGATTTGCAT 158240
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|| || | ||||| | || | ||||| ||||||||||||||||||||||||||||
Sbjct 158242 CCTCCGCGCAATCGAAGGACAAGGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGGAG 158301
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| || |||| || || || || || ||||| || | ||||| ||||| || ||
Sbjct 158302 AGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCAGGCGGG 158361
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| ||||||||||||| || || || || | | ||||| | ||| |||
Sbjct 158362 ATACCCTCCTTGTCCTGGATCTTGGCTTTCACATTGTCGATCGTGTCCGAAGACTCGACC 158421
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||| || |||||||| || || || ||||| || || || |||||
Sbjct 158422 TCCAGTGTGATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 158468
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || || ||||||||| |||||||| ||| || ||| |||| ||
Sbjct 158488 ACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCA 158547
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || ||||| || || | ||||| || || || || | |||||||||||| |
Sbjct 158548 AGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCAGGTGGGATACCCTCCTTGTCTTGA 158607
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | |||| | ||||||||| | ||| ||||||||
Sbjct 158608 ATCTTGGCCTTGACGTTGTCGATAGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTA 158667
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| ||||||||||| |||||||| ||||||
Sbjct 158668 CCGGTCAGAGTCTTGACAAAGATCTGCATG 158697
>seq18
Length=577775
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || || ||||||||| ||||||||||| || | | |||| ||
Sbjct 283461 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGTGGCCGTCCTCA 283520
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || ||||| |||| ||||| |||||||| || | ||||||||||||
Sbjct 283521 AGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 283580
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | ||||| | ||| ||||| | || || |||||
Sbjct 283581 ATCTTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCGACCTCGAGAGTGATGGTCTTA 283640
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340
||||| || ||||| || ||||| ||||| |||
Sbjct 283641 CCCGTGAGGGTCTTAACGAAGATCTGCATCTTG 283673
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395074867766449
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |