Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq9 95.1 9e-15
seq12 91.5 1e-13
>seq9
Length=823499
Score = 95.1 bits (104), Expect = 9e-15
Identities = 112/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800
|||||| | |||||||| || ||||||||| || | || || || || || || ||||
Sbjct 594033 CGTCTCGTCGCCTTTGCCGCCGTTGAAGGCATCTTCTTCTCCGGCTCCTTCGCCTCCATC 593974
Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860
|||||||| ||||| || |||||||| || | | || ||||||||| | ||
Sbjct 593973 TTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCG 593914
Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTG 22892
|| ||||||||||| ||| |||||||| ||
Sbjct 593913 CGCGACGAAGGTCTGCACACCGACTTTGCCTG 593882
>seq12
Length=665503
Score = 91.5 bits (100), Expect = 1e-13
Identities = 120/164 (73%), Gaps = 2/164 (1%)
Strand=Plus/Plus
Query 33554 TGCGCAAGATACGCATACCAGAGATGGGCGACAAGTTTGCATCG-TTCACGGCCCAGAAG 33612
||||||| | || | || ||| ||||||||||||||| ||| ||||| ||||||
Sbjct 67102 TGCGCAACACGCGTGTGCCGCAGACGGGCGACAAGTTTGCCTCGCGCCACGG-TCAGAAG 67160
Query 33613 GGCACGTGCGGCATGATGTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTC 33672
|| ||| ||| || | |||| ||| ||||||||||||| |||| || || |
Sbjct 67161 GGTACGATCGGTATCACGTACAGGCAGGAGGACATGCCGTTCTCGGCGGAAGGAATTACG 67220
Query 33673 CCGGACCTAGTCATCAACCCGCATGCGTTCCCCTCGCGCATGAC 33716
|||||| | ||||||||||||| || | || ||||| |||||
Sbjct 67221 CCGGACATTATCATCAACCCGCACGCCATTCCGTCGCGAATGAC 67264
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356233300429807
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |