Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq1 95.1 8e-15
>seq1
Length=2015588
Score = 95.1 bits (104), Expect = 8e-15
Identities = 149/212 (70%), Gaps = 1/212 (0%)
Strand=Plus/Minus
Query 25387 TGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGT 25446
|||| ||||| || || ||||| | ||| ||||| |||||||||||||||| ||
Sbjct 1720182 TGGGGAAGGGCAGAGGATCTCTCTCCAACTGCACCTTCAACGGTTCTACGTGATCCTTGT 1720123
Query 25447 AGACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAG 25506
||||||| || || |||| | | | || || ||| ||||| |||| || | |
Sbjct 1720122 AGACGTGCGCATCGCCCATGGCGAGCACCAATTCTTTAGGTTCGCAATCGGTCACCTTGG 1720063
Query 25507 CCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGT 25566
| |||||||| || | ||| |||||| || ||||| || || || || || || | |
Sbjct 1720062 CGATCATGTAGGTCAACAGAGCGTAGCTAGCAATGTTGAACGGAACGCCCAAACCGA-GA 1720004
Query 25567 CCCCCCGACCTCTGGTAGAGCTGACACGAGAG 25598
| | ||| | |||||| | |||||||||||
Sbjct 1720003 TCGCACGAACGCTGGTACATTTGACACGAGAG 1719972
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340137313965537
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |