Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq5 152 8e-33 >seq5 Length=1012715 Score = 152 bits (168), Expect = 8e-33 Identities = 182/246 (74%), Gaps = 1/246 (0%) Strand=Plus/Plus Query 16447 CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCG 16506 ||||||| | ||||| |||||||| || ||||||||||| |||||||| ||||| || || Sbjct 318258 CAGATCT-TGCGAGACAACATCCAGGGTATCACCAAGCCCGCTATCCGACGTCTCGCGCG 318316 Query 16507 TCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAA 16566 ||||||||| ||||||||| ||||||| | |||| || |||| |||| ||| | || Sbjct 318317 TCGTGGTGGTGTCAAGCGTATCTCTGGTCTCATCTACGACGAGACCCGTGGTGTGCTCAA 318376 Query 16567 GATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAA 16626 | |||||||| || | || |||| || | || ||| || |||||||| || || || Sbjct 318377 GCTCTTCCTCGAGTCGGTCATCCGCGACTCAGTCACCTACACTGAGCACGCCAAGCGCAA 318436 Query 16627 GACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGG 16686 ||| || || || | || | ||||| || | || || || ||||| | | || || Sbjct 318437 GACCGTTACTTCGCTCGACGTTGTCTACGCTCTCAAGCGCCAGGGCCGCACCCTCTACGG 318496 Query 16687 TTTTGG 16692 ||| || Sbjct 318497 TTTCGG 318502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075136912817