Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq5 152 8e-33
>seq5
Length=1012715
Score = 152 bits (168), Expect = 8e-33
Identities = 182/246 (74%), Gaps = 1/246 (0%)
Strand=Plus/Plus
Query 16447 CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCG 16506
||||||| | ||||| |||||||| || ||||||||||| |||||||| ||||| || ||
Sbjct 318258 CAGATCT-TGCGAGACAACATCCAGGGTATCACCAAGCCCGCTATCCGACGTCTCGCGCG 318316
Query 16507 TCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAA 16566
||||||||| ||||||||| ||||||| | |||| || |||| |||| ||| | ||
Sbjct 318317 TCGTGGTGGTGTCAAGCGTATCTCTGGTCTCATCTACGACGAGACCCGTGGTGTGCTCAA 318376
Query 16567 GATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAA 16626
| |||||||| || | || |||| || | || ||| || |||||||| || || ||
Sbjct 318377 GCTCTTCCTCGAGTCGGTCATCCGCGACTCAGTCACCTACACTGAGCACGCCAAGCGCAA 318436
Query 16627 GACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGG 16686
||| || || || | || | ||||| || | || || || ||||| | | || ||
Sbjct 318437 GACCGTTACTTCGCTCGACGTTGTCTACGCTCTCAAGCGCCAGGGCCGCACCCTCTACGG 318496
Query 16687 TTTTGG 16692
||| ||
Sbjct 318497 TTTCGG 318502
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075136912817
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |