Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq19 257 4e-63 >seq19 Length=568126 Score = 257 bits (284), Expect = 4e-63 Identities = 1152/1799 (64%), Gaps = 52/1799 (3%) Strand=Plus/Plus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450 ||||| | |||||| | ||| |||||||| || ||||| || | | | || Sbjct 48276 TTCGGCTTCAAGACGCTCGAGCGCTCCTACCTCCTCCGCATCAACGGCAAGGTCGCAGAG 48335 Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510 || || ||||| ||| | |||||||| || | |||||||| ||| ||| | || | Sbjct 48336 CGTCCCCAGCACATGCTCATGCGTGTCGCCGTCGGTATCCACGGCCAGGACATCGAGAGC 48395 Query 363511 GCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCACGCCAACAA 363568 || ||||| || || || || | || || ||| || || |||||| | || || Sbjct 48396 GCCATTGAGACCTACAACCTCAT--GTCGCAAAAGTACTTTACACACGCCTCCCCCACCC 48453 Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 | | ||| || || || | | || ||| | || || ||||| || | | ||||||| Sbjct 48454 TCTTCAACGCAGGTACCCCGCACCCTCAGCTCTCGTCGTGCTTCCTCGTCACCATGAAGG 48513 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 |||| || ||||| || |||| ||||| || |||| ||||| | || ||||||| | Sbjct 48514 ACGACTCGATCGATGGCATCTACGACACGCTCAAGACGTGTGCCATGATCTCCAAGACCG 48573 Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG-CACAGAACAGTT---ACATTCGC 363744 | || || || || | |||||| | || | ||| | ||| ||||| | Sbjct 48574 CCGGTGGTATCGGCCTCAACATCCACTGCATCCGCGGCACCG----GTTCCTACATTGCC 48629 Query 363745 GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCG 363804 || || || | || || | || |||||||| || || || |||| || || Sbjct 48630 GGTACCAACGGTGTCAGCAACGGTATCGTGCCCATGCTCCGCGTCTTCAACAACACCGCC 48689 Query 363805 AGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCT 363864 | ||||||||||||||||| ||||| || || ||||| || || | ||||| Sbjct 48690 CGCTACGTCGACCAGGGTGGCAACAAGCGTCCCGGTGCCTTTGCCATTTACGTTGAGCCA 48749 Query 363865 CATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTG 363924 || | || | |||||||| || || ||||| || ||| || || ||||| || Sbjct 48750 TGGCACTCGGACGTCTTTGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTG 48809 Query 363925 CGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAG 363984 ||||| || || || ||||| ||||| ||||| | || | || |||||| | || ||| Sbjct 48810 CGTGCCCGAGAGCTCTTCTACGCACTCTGGGTGCCCGATCTCTTCATGAAGAGGGTCGAG 48869 Query 363985 GCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATG 364043 ||| | | ||||| ||| | ||||| |||| || || || || | || | Sbjct 48870 -CAGAACGGCGACTGGTCGCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCTGACTGCTA 48928 Query 364044 GGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAG-- 364101 || ||||| | || || ||||| || || | ||||| || ||| Sbjct 48929 CGGCGACGAGTTTGAGCGCCTCTACGAGCGCTACGAGGCCGAGGGCCGTGCC---AAGCG 48985 Query 364102 -ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAAC 364160 || | || |||||||| |||| |||||| | || ||||||| ||||| || | Sbjct 48986 CACCGTCAAGGCCCAGAAGCTCTGGTACGCCATCCTCGAGTCGCAGACCGAGACCGGCAA 49045 Query 364161 ACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTAC 364220 |||| || | ||||| ||| | ||||||||| ||||||| || |||| || || Sbjct 49046 CCCCTTCATCCTCTACAAGGATGCCGCTAACCGCAAGAGCAACCAGAAGAACCTCGGCAC 49105 Query 364221 AATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGC 364280 || || |||| | || ||||||||||| || |||| ||| ||||||||| || Sbjct 49106 CATCAAGTGCTCCAACTTGTGCACCGAGATTATCGAGTACAGCGCCCCCGACGAGGTGGC 49165 Query 364281 CGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGT------ACTTT 364334 || || ||| | || |||||||| || || | || | | | || | Sbjct 49166 TGTCTGCAACTTGGCCTCGATCGCCCTCCCCACCTTCATCGACCCCGTCGCCAAGACGTA 49225 Query 364335 TGACCACCAGCATCTTTATGACGTAACCTAT--CATGCTACTTGCAATCTCGACAAGGTT 364392 ||| | | | ||| | || || || | ||| || | | || || ||||| | Sbjct 49226 CGACTTCAAACGTCTGCACGAGGTCGCCAAGGCCAT-CTGCAAG-AACCTTAACAAGATC 49283 Query 364393 ATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCG 364452 ||||||| || || || || | || ||| || || || ||||| || || || Sbjct 49284 ATCGACATCAACTACTACCCCGTCGAGGAGGCCCGTCGATCCAACATGCGCCACCGTCCC 49343 Query 364453 ATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGAT 364512 || ||| | ||||| ||||| || || |||| || ||||| | || ||||| Sbjct 49344 ATCGGTATCGGTGTCCAGGGTCTTGCCGACGCCTTCATGATCATGGGCTACGCCTTTGAG 49403 Query 364513 TCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAAT- 364571 || || || |||||| ||| || | | ||||| || || || || ||||| | Sbjct 49404 TCTCCCGAGGCTCGTCGTCTCAACGTGCATATCTTCGAGACCATCTACCACGCCGCTCTC 49463 Query 364572 GACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCC 364631 || | | |||| || |||| | | || | ||| || || | || || || Sbjct 49464 GAGCGAT-CGTGCGAGCTGGCTCAGCAGCACGGCACCTACGAGACCTACGCCGGCTCGCC 49522 Query 364632 TCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAA 364691 ||||||||| | | |||| || | ||| ||||| || || | || ||| | Sbjct 49523 CGCTTCGCAGGGTGAGCTGCAGTACGACATGTGGGGCGTCACCCCCTCGGACCTCTGGGA 49582 Query 364692 CTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGC 364751 ||||| ||| |||| | ||||| ||| |||||||| || | || Sbjct 49583 CTGGGCCGAGCTCAAGGCCAAGATCGCCAAGCACGGTCTGCGCAACTCGCTTCTGCTCGC 49642 Query 364752 GCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTT 364811 ||||||||||| || || || ||||||||||| ||||||||||||||| || | Sbjct 49643 TCCCATGCCCACCGCCTCGACCAGTCAGATCCTCGGCTTCAACGAGTGCTTCGAGCC--T 49700 Query 364812 TACAAG--CAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAG 364869 |||| | ||| | || || || || || || |||| || || | ||| || || Sbjct 49701 TACACGTCCAACATCTACTCGCGTCGTGTGCTCGCCGGTGAGTTCCAGGTGGTGAACCCT 49760 Query 364870 TACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATC 364929 | | || || || ||| | || |||||| |||| ||||||||| ||| Sbjct 49761 TGGTTGCTCCGCGAGCTCGTCGAGCAGGGTCTGTGGAACGACACGATGAAGAACCGCATC 49820 Query 364930 ATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGA--AGATC-TGAAGCCT 364986 ||||| ||||| | |||||| | || || | || || ||| ||||| Sbjct 49821 ATCGCTCACGGCGGTTCCATCCAGAACGTGCCCGGCATCCCCGACCGCATCAAGAAGC-- 49878 Query 364987 ATTTACAAAACCGTATGGGAAAT-TTCCATGCGAA--CTCTCATTGATATGGCGGCCGAT 365043 | ||||| ||||| ||||| || ||| ||| | |||| || ||||| ||||| Sbjct 49879 -TCTACAAGACCGTCTGGGAGATCAGCCA---GAAGGCCATCATCGACATGGCCGCCGAC 49934 Query 365044 CGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTC--AGCCAACCT 365101 || |||||||| ||||| ||| |||||| | ||| ||||| ||| ||| |||| Sbjct 49935 CGTGGTGCTTTCATCTGCCAGTCGCAGTCGCTCAAC--ATTCACCTCTCGGCGCCTACCT 49992 Query 365102 CCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGGTGCC 365160 | | |||| || || ||||| |||||||| ||||| ||||| ||||| ||| || Sbjct 49993 TTGGCCAGCTCACCTCGATGCACTTCTACGGCTGGAAGAAGGGTCTCAAGACCGGTACC 50051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352447753958