Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq19 257 4e-63
>seq19
Length=568126
Score = 257 bits (284), Expect = 4e-63
Identities = 1152/1799 (64%), Gaps = 52/1799 (3%)
Strand=Plus/Plus
Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450
||||| | |||||| | ||| |||||||| || ||||| || | | | ||
Sbjct 48276 TTCGGCTTCAAGACGCTCGAGCGCTCCTACCTCCTCCGCATCAACGGCAAGGTCGCAGAG 48335
Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510
|| || ||||| ||| | |||||||| || | |||||||| ||| ||| | || |
Sbjct 48336 CGTCCCCAGCACATGCTCATGCGTGTCGCCGTCGGTATCCACGGCCAGGACATCGAGAGC 48395
Query 363511 GCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCACGCCAACAA 363568
|| ||||| || || || || | || || ||| || || |||||| | || ||
Sbjct 48396 GCCATTGAGACCTACAACCTCAT--GTCGCAAAAGTACTTTACACACGCCTCCCCCACCC 48453
Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628
| | ||| || || || | | || ||| | || || ||||| || | | |||||||
Sbjct 48454 TCTTCAACGCAGGTACCCCGCACCCTCAGCTCTCGTCGTGCTTCCTCGTCACCATGAAGG 48513
Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688
|||| || ||||| || |||| ||||| || |||| ||||| | || ||||||| |
Sbjct 48514 ACGACTCGATCGATGGCATCTACGACACGCTCAAGACGTGTGCCATGATCTCCAAGACCG 48573
Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG-CACAGAACAGTT---ACATTCGC 363744
| || || || || | |||||| | || | ||| | ||| ||||| |
Sbjct 48574 CCGGTGGTATCGGCCTCAACATCCACTGCATCCGCGGCACCG----GTTCCTACATTGCC 48629
Query 363745 GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCG 363804
|| || || | || || | || |||||||| || || || |||| || ||
Sbjct 48630 GGTACCAACGGTGTCAGCAACGGTATCGTGCCCATGCTCCGCGTCTTCAACAACACCGCC 48689
Query 363805 AGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCT 363864
| ||||||||||||||||| ||||| || || ||||| || || | |||||
Sbjct 48690 CGCTACGTCGACCAGGGTGGCAACAAGCGTCCCGGTGCCTTTGCCATTTACGTTGAGCCA 48749
Query 363865 CATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTG 363924
|| | || | |||||||| || || ||||| || ||| || || ||||| ||
Sbjct 48750 TGGCACTCGGACGTCTTTGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTG 48809
Query 363925 CGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAG 363984
||||| || || || ||||| ||||| ||||| | || | || |||||| | || |||
Sbjct 48810 CGTGCCCGAGAGCTCTTCTACGCACTCTGGGTGCCCGATCTCTTCATGAAGAGGGTCGAG 48869
Query 363985 GCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATG 364043
||| | | ||||| ||| | ||||| |||| || || || || | || |
Sbjct 48870 -CAGAACGGCGACTGGTCGCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCTGACTGCTA 48928
Query 364044 GGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAG-- 364101
|| ||||| | || || ||||| || || | ||||| || |||
Sbjct 48929 CGGCGACGAGTTTGAGCGCCTCTACGAGCGCTACGAGGCCGAGGGCCGTGCC---AAGCG 48985
Query 364102 -ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAAC 364160
|| | || |||||||| |||| |||||| | || ||||||| ||||| || |
Sbjct 48986 CACCGTCAAGGCCCAGAAGCTCTGGTACGCCATCCTCGAGTCGCAGACCGAGACCGGCAA 49045
Query 364161 ACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTAC 364220
|||| || | ||||| ||| | ||||||||| ||||||| || |||| || ||
Sbjct 49046 CCCCTTCATCCTCTACAAGGATGCCGCTAACCGCAAGAGCAACCAGAAGAACCTCGGCAC 49105
Query 364221 AATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGC 364280
|| || |||| | || ||||||||||| || |||| ||| ||||||||| ||
Sbjct 49106 CATCAAGTGCTCCAACTTGTGCACCGAGATTATCGAGTACAGCGCCCCCGACGAGGTGGC 49165
Query 364281 CGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGT------ACTTT 364334
|| || ||| | || |||||||| || || | || | | | || |
Sbjct 49166 TGTCTGCAACTTGGCCTCGATCGCCCTCCCCACCTTCATCGACCCCGTCGCCAAGACGTA 49225
Query 364335 TGACCACCAGCATCTTTATGACGTAACCTAT--CATGCTACTTGCAATCTCGACAAGGTT 364392
||| | | | ||| | || || || | ||| || | | || || ||||| |
Sbjct 49226 CGACTTCAAACGTCTGCACGAGGTCGCCAAGGCCAT-CTGCAAG-AACCTTAACAAGATC 49283
Query 364393 ATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCG 364452
||||||| || || || || | || ||| || || || ||||| || || ||
Sbjct 49284 ATCGACATCAACTACTACCCCGTCGAGGAGGCCCGTCGATCCAACATGCGCCACCGTCCC 49343
Query 364453 ATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGAT 364512
|| ||| | ||||| ||||| || || |||| || ||||| | || |||||
Sbjct 49344 ATCGGTATCGGTGTCCAGGGTCTTGCCGACGCCTTCATGATCATGGGCTACGCCTTTGAG 49403
Query 364513 TCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAAT- 364571
|| || || |||||| ||| || | | ||||| || || || || ||||| |
Sbjct 49404 TCTCCCGAGGCTCGTCGTCTCAACGTGCATATCTTCGAGACCATCTACCACGCCGCTCTC 49463
Query 364572 GACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCC 364631
|| | | |||| || |||| | | || | ||| || || | || || ||
Sbjct 49464 GAGCGAT-CGTGCGAGCTGGCTCAGCAGCACGGCACCTACGAGACCTACGCCGGCTCGCC 49522
Query 364632 TCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAA 364691
||||||||| | | |||| || | ||| ||||| || || | || ||| |
Sbjct 49523 CGCTTCGCAGGGTGAGCTGCAGTACGACATGTGGGGCGTCACCCCCTCGGACCTCTGGGA 49582
Query 364692 CTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGC 364751
||||| ||| |||| | ||||| ||| |||||||| || | ||
Sbjct 49583 CTGGGCCGAGCTCAAGGCCAAGATCGCCAAGCACGGTCTGCGCAACTCGCTTCTGCTCGC 49642
Query 364752 GCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTT 364811
||||||||||| || || || ||||||||||| ||||||||||||||| || |
Sbjct 49643 TCCCATGCCCACCGCCTCGACCAGTCAGATCCTCGGCTTCAACGAGTGCTTCGAGCC--T 49700
Query 364812 TACAAG--CAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAG 364869
|||| | ||| | || || || || || || |||| || || | ||| || ||
Sbjct 49701 TACACGTCCAACATCTACTCGCGTCGTGTGCTCGCCGGTGAGTTCCAGGTGGTGAACCCT 49760
Query 364870 TACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATC 364929
| | || || || ||| | || |||||| |||| ||||||||| |||
Sbjct 49761 TGGTTGCTCCGCGAGCTCGTCGAGCAGGGTCTGTGGAACGACACGATGAAGAACCGCATC 49820
Query 364930 ATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGA--AGATC-TGAAGCCT 364986
||||| ||||| | |||||| | || || | || || ||| |||||
Sbjct 49821 ATCGCTCACGGCGGTTCCATCCAGAACGTGCCCGGCATCCCCGACCGCATCAAGAAGC-- 49878
Query 364987 ATTTACAAAACCGTATGGGAAAT-TTCCATGCGAA--CTCTCATTGATATGGCGGCCGAT 365043
| ||||| ||||| ||||| || ||| ||| | |||| || ||||| |||||
Sbjct 49879 -TCTACAAGACCGTCTGGGAGATCAGCCA---GAAGGCCATCATCGACATGGCCGCCGAC 49934
Query 365044 CGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTC--AGCCAACCT 365101
|| |||||||| ||||| ||| |||||| | ||| ||||| ||| ||| ||||
Sbjct 49935 CGTGGTGCTTTCATCTGCCAGTCGCAGTCGCTCAAC--ATTCACCTCTCGGCGCCTACCT 49992
Query 365102 CCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGGTGCC 365160
| | |||| || || ||||| |||||||| ||||| ||||| ||||| ||| ||
Sbjct 49993 TTGGCCAGCTCACCTCGATGCACTTCTACGGCTGGAAGAAGGGTCTCAAGACCGGTACC 50051
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303352447753958
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |