Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq9 89.7 4e-13
seq18 82.4 7e-11
>seq9
Length=823499
Score = 89.7 bits (98), Expect = 4e-13
Identities = 140/199 (70%), Gaps = 5/199 (3%)
Strand=Plus/Plus
Query 105272 GCTCGATGATATTAGTGTTCACGATGACGTCGGCAGCGGCAAAAAACGCGAGAACGTGCT 105331
|||||| || || ||| ||||| |||||| |||||| || || ||||| ||||||
Sbjct 594261 GCTCGACGAGGTTCTCGTTGACGATACCGTCGGAAGCGGCGAAGAAGGCGAGGACGTGCG 594320
Query 105332 TCAAAAAGAATCGTTCTTTATCGTTCAGTTTGTTGTTCCAATCGTCAAAGTCTTTGGACA 105391
| |||| ||||| || ||||| || ||||||| ||| |||| | || ||||| |
Sbjct 594321 AGATAAAGTGGCGTTCGTTGTCGTTGAGCTTGTTGTCCCAGTCGTGGAGATCCTTGGAAA 594380
Query 105392 TGTCGATTTCTTCAACTTTCCAATGACAATCGAGCGCCTTTTTGTACGATTGCCAAAGAT 105451
|||||| ||||| | |||| || | |||||||||||| ||||| ||||
Sbjct 594381 GGTCGATCTCTTCGGCGGTCCAGAAGGAAGCCTCGGCCTTTTTGTACATTTGCC--AGAT 594438
Query 105452 CTTCATTCACGATGGGGAA 105470
|| | | |||||||||
Sbjct 594439 CT---GTGATGATGGGGAA 594454
>seq18
Length=577775
Score = 82.4 bits (90), Expect = 7e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | ||||| || || | || || || | || || |||| |||||| ||
Sbjct 203609 ATGCAGATCTTTGTCAAGACTCTGACCGGCAAGACCATCACTCTCGAGGTCGAGTCCTCT 203550
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||||||||| | ||||| ||||| ||||| |||||||| || ||||||||
Sbjct 203549 GACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCACCCGATCAG 203490
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGA 24145
||| | || |||| | ||||||||| || |||||
Sbjct 203489 CAGCGGCTTATTTTTGCCGGCAAGCAGCTTGAAGA 203455
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429935638450695
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |