Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq9 89.7 4e-13 seq18 82.4 7e-11 >seq9 Length=823499 Score = 89.7 bits (98), Expect = 4e-13 Identities = 140/199 (70%), Gaps = 5/199 (3%) Strand=Plus/Plus Query 105272 GCTCGATGATATTAGTGTTCACGATGACGTCGGCAGCGGCAAAAAACGCGAGAACGTGCT 105331 |||||| || || ||| ||||| |||||| |||||| || || ||||| |||||| Sbjct 594261 GCTCGACGAGGTTCTCGTTGACGATACCGTCGGAAGCGGCGAAGAAGGCGAGGACGTGCG 594320 Query 105332 TCAAAAAGAATCGTTCTTTATCGTTCAGTTTGTTGTTCCAATCGTCAAAGTCTTTGGACA 105391 | |||| ||||| || ||||| || ||||||| ||| |||| | || ||||| | Sbjct 594321 AGATAAAGTGGCGTTCGTTGTCGTTGAGCTTGTTGTCCCAGTCGTGGAGATCCTTGGAAA 594380 Query 105392 TGTCGATTTCTTCAACTTTCCAATGACAATCGAGCGCCTTTTTGTACGATTGCCAAAGAT 105451 |||||| ||||| | |||| || | |||||||||||| ||||| |||| Sbjct 594381 GGTCGATCTCTTCGGCGGTCCAGAAGGAAGCCTCGGCCTTTTTGTACATTTGCC--AGAT 594438 Query 105452 CTTCATTCACGATGGGGAA 105470 || | | ||||||||| Sbjct 594439 CT---GTGATGATGGGGAA 594454 >seq18 Length=577775 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | || || || | || || |||| |||||| || Sbjct 203609 ATGCAGATCTTTGTCAAGACTCTGACCGGCAAGACCATCACTCTCGAGGTCGAGTCCTCT 203550 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| |||||||| || |||||||| Sbjct 203549 GACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCACCCGATCAG 203490 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGA 24145 ||| | || |||| | ||||||||| || ||||| Sbjct 203489 CAGCGGCTTATTTTTGCCGGCAAGCAGCTTGAAGA 203455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935638450695