Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq19 235 5e-57
seq11 140 3e-28
seq9 138 1e-27
seq18 125 7e-24
seq1 102 8e-17
>seq19
Length=568126
Score = 235 bits (260), Expect = 5e-57
Identities = 949/1457 (65%), Gaps = 57/1457 (4%)
Strand=Plus/Minus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
|| || ||||| ||||| ||||| | |||||||||| | || | ||| |||||| | ||
Sbjct 49756 TTCACCACCTGGAACTCACCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGC 49697
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || ||||||| ||| ||||| ||| ||||| |||||||||||| || | |
Sbjct 49696 TCGAAGCACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGC 49637
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| | || |||||||| |||||||| ||| | |||| ||| |||| |||||
Sbjct 49636 AGAAGCGAGTTGCGCAGACCGTGCTTGGCGATCTTGGCCTTGAGCTCGGCCCAGTCCCAG 49577
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTG----GCGGG 145293
|| | || | ||| |||||||||||||||||| || | | ||| |||||
Sbjct 49576 AGGTCCGAGGGGGTGACGCCCCACATGTCGTACTGCA----GCTCACCCTGCGAAGCGGG 49521
Query 145294 GCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTG----GCGAGCTCGCA-ACTCGCC 145348
||| ||| ||| |||| || || || |||||||| ||| |
Sbjct 49520 CGAGCCGGCGTAGGTCTCGTAGGTGCC----GTGCTGCTGAGCCAGCTCGCACGATCG-C 49466
Query 145349 TCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCG 145408
|| |||||| || || || |||||| || ||| |||||| | || ||
Sbjct 49465 TCGAGAGCGGCGTGGTAGATGGTCTCGAAGATATGCACGTTGAGACGACGAGCCTCGGGA 49406
Query 145409 CTCTCGTACGGCAT-GCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCC 145467
||| | ||| | || || | | || || ||||| || ||||| | || | ||
Sbjct 49405 GACTC-AAAGGCGTAGCCCATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATACC 49347
Query 145468 GATGGGCCGATGTTTCATGTTGCTCATC--CTCGCCGACTCGATAGGATATCGATTACGG 145525
|||||| || || ||||||| ||| | ||| ||||| || || || |
Sbjct 49346 GATGGGACGGTGGCGCATGTTG--GATCGACGGGCCTCCTCGACGGGGTAGTAGTTGATG 49289
Query 145526 TCGATAATTTTATTCAAGTT-TCGCACTACTACCTTTGTAATGTGCCGCA-ACTTTTCAA 145583
||||| || || || | ||| | ||| | |||| | | | ||| || ||| |
Sbjct 49288 TCGATGATCTTGTTAAGGTTCTTGCA-GATGGCCTTGGCGACCTCGTGCAGACGTTT-GA 49231
Query 145584 AGTCAAACCGAGCCTCGTCAAC---GACCACACAGCTATTGACGGCGATCGACGCCAAAT 145640
|||| || | || | | || | | | || | || ||||||||| ||||| |
Sbjct 49230 AGTCGTAC---GTCTTGGCGACGGGGTCGATGAAGGTGGGGAGGGCGATCGAGGCCAAGT 49174
Query 145641 TACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTAC 145700
| || || ||| ||| |||| | ||||||| | | ||||||| |||||| ||| |
Sbjct 49173 TGCAGACAGCCACCTCGTCGGGGGCGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGC 49114
Query 145701 ATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCA 145760
| |||||||| || || || | ||| || || || | ||| || ||||||||||| |
Sbjct 49113 ACTTGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGA 49054
Query 145761 TGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCA-AG-TCCTGCGC 145818
|| | || ||| ||||| ||||| ||| | ||| || || || | ||| ||
Sbjct 49053 TGAAGGGGTTGCCGGTCTCGGTCTGCGACTCGAGGAT--GGCGTACCAGAGCTTCTGGGC 48996
Query 145819 ACGCAC-CTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACG 145877
|| ||| ||| | |||||||| | ||||| | |||||| |||||||
Sbjct 48995 CTTGACGGTGC-GCTTGGCACGGCCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCAAACT 48937
Query 145878 CGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGC 145937
|| |||||||| || | |||||||| |||| |||||| ||||| |||||||| |||
Sbjct 48936 CGTCGCCGTAGCAGTCAGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGC 48877
Query 145938 CGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGC 145997
|||| | ||| | || ||| || | ||| |||||||| || ||||| | | || |
Sbjct 48876 CGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTC 48817
Query 145998 GCGCTTTGCA-ATCCTCAGCACCCATGTT-TCGCTTCAAATTAAGCACACT-ATAGATGT 146054
| || ||| ||||| || ||| | || | | || | ||| | ||| ||
Sbjct 48816 GGGC-ACGCACCTCCTCCTTGCCGTGGTTCTTGC-GGAGGTCGAGGA-ACTCAAAGACGT 48760
Query 146055 CCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGT 146111
||| |||||| || |||| || | ||| | ||| || || |||||||||||||
Sbjct 48759 CCGAGTGCCATGGCTCAACGTAAATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGT 48700
Query 146112 CCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGC 146171
| |||| || | ||||||| |||||||| | ||||||| ||| ||| || || |
Sbjct 48699 CGACGTAGCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGCACGATACCGTTGCTGACAC 48640
Query 146172 CGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGAC 146231
|||| ||| | || || ||| | ||| | ||| || | || | ||||| ||
Sbjct 48639 CGTTGGTACCGGCAATGTAGGAACCGGTGCCGCGGATGCAGTGGATGTTGAGGCCGATAC 48580
Query 146232 CGCCGCCGTACTTGGATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGCCGTCAATG 146290
| ||| || |||||| || ||| || ||| |||||| ||||||||||| || ||
Sbjct 48579 CACCGGCGGTCTTGGAGATCATGGCACACGTC-TTGAGCGTGTCGTAGATGCCATCGATC 48521
Query 146291 CTATCG--CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCG 146348
||| |||| ||| || || |||||||| | | ||| | ||| || || |
Sbjct 48520 GAGTCGTCCTTC--ATGGTGACGAGGAAGCACGACGAGAGCTGAGGGTGCGGGGTACCTG 48463
Query 146349 CCGAGAACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCGATACGTTT 146408
| ||| | || ||| ||||| ||||| ||| | ||| | || || |
Sbjct 48462 CGTTGAAGAGGGTGGGGGAGGCGTGTGTAAAGTACTTTTGCGACATGAGGTTGTAGGTCT 48403
Query 146409 CGATAGCG-TCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGT 146467
| || ||| ||| | ||||| | ||| || || || | ||||| ||||||||||||||
Sbjct 48402 CAATGGCGCTCTCG-ATGTCCTGGCCGTGGATACCGACGGCGACACGCATGAGCATGTGC 48344
Query 146468 TGGGGCCGCTCCGCCAC 146484
||||| ||||| || ||
Sbjct 48343 TGGGGACGCTCTGCGAC 48327
>seq11
Length=758843
Score = 140 bits (154), Expect = 3e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | || | |||||||||||| || ||||||||||||
Sbjct 158470 CCACCACGGAGACGGAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGAA 158529
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| ||||||||||| || |||| | ||||||||| || || |||
Sbjct 158530 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCAGGTGGG 158589
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||||| | || | ||| |||| ||||| |
Sbjct 158590 ATACCCTCCTTGTCTTGAATCTTGGCCTTGACGTTGTCGATAGTGTCGGAAGACTCCACC 158649
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGAC 131237
|||| ||| | || |||||||| ||||| || || || |||||||||||
Sbjct 158650 TCGAGGGTGATCGTCTTACCGGTCAGAGTCTTGACAAAGATCTGCATGAC 158699
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || |||| ||| || || | || | ||| |||||| ||||||||||| ||
Sbjct 158014 CCGCCACGCAGACGGAGGACGAGGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCCGAA 158073
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| |||||||| || || |||| || ||||||||||| ||||||
Sbjct 158074 AGAGTGCGACCATCCTCCAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCGGGAGGG 158133
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | |||||| | ||||||||
Sbjct 158134 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATAGTATCCGAGGACTCGACA 158193
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| |||| ||| || || || || || || || || || |||||
Sbjct 158194 TCGAGCGTAATGGTCTTGCCCGTGAGCGTCTTGACAAAGATTTGCAT 158240
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| |||||||| || || || | || | || |||||| ||||||||||| |||
Sbjct 158242 CCTCCGCGCAATCGAAGGACAAGGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGGAG 158301
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || |||||| |||||||| || ||| | || | ||||||||||| || |||
Sbjct 158302 AGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCAGGCGGG 158361
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || || | | || | || || | |||||||
Sbjct 158362 ATACCCTCCTTGTCCTGGATCTTGGCTTTCACATTGTCGATCGTGTCCGAAGACTCGACC 158421
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | || || || || || || || ||||||||||||||
Sbjct 158422 TCCAGTGTGATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 158468
>seq9
Length=823499
Score = 138 bits (152), Expect = 1e-27
Identities = 335/502 (67%), Gaps = 13/502 (3%)
Strand=Plus/Minus
Query 46100 AGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGTA 46159
||||| ||||||||||| || ||||||| | || ||| |||||||||||||||
Sbjct 594089 AGAAAGCCGACTGGGCGCTGCGATGGATCAGCGACAAGCGCGCCACTTTCGCCGAGCGTC 594030
Query 46160 TGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTT 46219
| || |||||||| || || ||| |||| || || ||| || ||| ||||||| |
Sbjct 594029 TCGTCGCCTTTGCCGCCGTTGAAGGCATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCT 593970
Query 46220 ACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGC 46278
|||| || | || | |||||||||| || || || ||||||||| || ||||||
Sbjct 593969 GGCTCAAGAAGCGCGGTC-TCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCGCGC 593911
Query 46279 GACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACAAG 46338
||||| || ||||| || |||||||| || ||| || | || | | | |||
Sbjct 593910 GACGAAGGTCTGCACACCGACTTTGCCTGCCTCCTCTTCA------GCCACCTCAAGAAG 593857
Query 46339 CTTGC---GCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAG 46395
| ||| || ||||||||||| | || ||| | || || | ||| ||| ||||
Sbjct 593856 CGTGCACACCCGGACACCGTGCTCAAAATCATCACCCAAGCCGTCGACATCGAGGTGGAG 593797
Query 46396 TTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCAC-AGTCAATGTGCGA 46454
|| || || | || | ||| | ||| || || ||| || | || | ||| | |
Sbjct 593796 TTCTTGACTACTGCCATCCCCTGTCGCCTCCTCGGTATG-TCGAGCGAGGCCATGCACAA 593738
Query 46455 CTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCA 46514
|||||| ||| || || || || ||||||| ||| | ||| || |
Sbjct 593737 GTACATCAAGTACGTCGCCGATCGCTTGCTCGTTTCGCTCGGAAATCCGGTTCACTACGG 593678
Query 46515 CGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTT 46574
|| | || || || || || ||| | |||||||| |||| || || || || |||||
Sbjct 593677 CGAGAGCTGCCCGTTCGATTTCATGCAGAACATCTCATTGGAAGGTAAGACCAACTTTTT 593618
Query 46575 CGAAAAGCGCGTCGGCGAGTAT 46596
||| ||| |||| ||||||
Sbjct 593617 CGAGAAGAAGGTCGCAGAGTAT 593596
>seq18
Length=577775
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| || ||||| || || | |||||||||||| || |||||||| ||
Sbjct 283443 CCACCACGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 283502
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||| | |||||| |||||||| || ||| |||| | ||||||||||| || |||
Sbjct 283503 AGGGTGTGGCCGTCCTCAAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 283562
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || || | |||||||
Sbjct 283563 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCGACC 283622
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | ||| ||||| || || || || ||||| ||||||||
Sbjct 283623 TCGAGAGTGATGGTCTTACCCGTGAGGGTCTTAACGAAGATCTGCAT 283669
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || || | ||||| || || || | ||||||||||| || || ||||| |||
Sbjct 203383 CCTCCACGGAGACGCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGAA 203442
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || ||| || ||||||||||| || | || | |||||||| || || |||
Sbjct 203443 AGGGTACGGCCGTCTTCAAGCTGCTTGCCGGCAAAAATAAGCCGCTGCTGATCGGGTGGG 203502
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| ||| || ||||| | || | || || | ||||||||
Sbjct 203503 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACC 203562
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | ||| || ||||| ||||| || || || ||||||||
Sbjct 203563 TCGAGAGTGATGGTCTTGCCGGTCAGAGTCTTGACAAAGATCTGCAT 203609
>seq1
Length=2015588
Score = 102 bits (112), Expect = 8e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||| || || | || | ||||||||||| || |||||||| ||
Sbjct 1818678 CCACCACGCAGACGGAGGACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 1818619
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| |||||| ||||||||||| ||| |||| | ||||||||||| || |||
Sbjct 1818618 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 1818559
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||||| | | | || || | |||||| |
Sbjct 1818558 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTTGATGGTGTCCGAGGACTCCACC 1818499
Query 131188 TCGACGGTAACGGTTTTACCGGTT 131211
|||| ||||| ||| ||||| |||
Sbjct 1818498 TCGAGGGTAATGGTCTTACCTGTT 1818475
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012392888960
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