Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq19 235 5e-57 seq11 140 3e-28 seq9 138 1e-27 seq18 125 7e-24 seq1 102 8e-17 >seq19 Length=568126 Score = 235 bits (260), Expect = 5e-57 Identities = 949/1457 (65%), Gaps = 57/1457 (4%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 || || ||||| ||||| ||||| | |||||||||| | || | ||| |||||| | || Sbjct 49756 TTCACCACCTGGAACTCACCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGC 49697 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || ||||||| ||| ||||| ||| ||||| |||||||||||| || | | Sbjct 49696 TCGAAGCACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGC 49637 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || |||||||| |||||||| ||| | |||| ||| |||| ||||| Sbjct 49636 AGAAGCGAGTTGCGCAGACCGTGCTTGGCGATCTTGGCCTTGAGCTCGGCCCAGTCCCAG 49577 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTG----GCGGG 145293 || | || | ||| |||||||||||||||||| || | | ||| ||||| Sbjct 49576 AGGTCCGAGGGGGTGACGCCCCACATGTCGTACTGCA----GCTCACCCTGCGAAGCGGG 49521 Query 145294 GCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTG----GCGAGCTCGCA-ACTCGCC 145348 ||| ||| ||| |||| || || || |||||||| ||| | Sbjct 49520 CGAGCCGGCGTAGGTCTCGTAGGTGCC----GTGCTGCTGAGCCAGCTCGCACGATCG-C 49466 Query 145349 TCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCG 145408 || |||||| || || || |||||| || ||| |||||| | || || Sbjct 49465 TCGAGAGCGGCGTGGTAGATGGTCTCGAAGATATGCACGTTGAGACGACGAGCCTCGGGA 49406 Query 145409 CTCTCGTACGGCAT-GCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCC 145467 ||| | ||| | || || | | || || ||||| || ||||| | || | || Sbjct 49405 GACTC-AAAGGCGTAGCCCATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATACC 49347 Query 145468 GATGGGCCGATGTTTCATGTTGCTCATC--CTCGCCGACTCGATAGGATATCGATTACGG 145525 |||||| || || ||||||| ||| | ||| ||||| || || || | Sbjct 49346 GATGGGACGGTGGCGCATGTTG--GATCGACGGGCCTCCTCGACGGGGTAGTAGTTGATG 49289 Query 145526 TCGATAATTTTATTCAAGTT-TCGCACTACTACCTTTGTAATGTGCCGCA-ACTTTTCAA 145583 ||||| || || || | ||| | ||| | |||| | | | ||| || ||| | Sbjct 49288 TCGATGATCTTGTTAAGGTTCTTGCA-GATGGCCTTGGCGACCTCGTGCAGACGTTT-GA 49231 Query 145584 AGTCAAACCGAGCCTCGTCAAC---GACCACACAGCTATTGACGGCGATCGACGCCAAAT 145640 |||| || | || | | || | | | || | || ||||||||| ||||| | Sbjct 49230 AGTCGTAC---GTCTTGGCGACGGGGTCGATGAAGGTGGGGAGGGCGATCGAGGCCAAGT 49174 Query 145641 TACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTAC 145700 | || || ||| ||| |||| | ||||||| | | ||||||| |||||| ||| | Sbjct 49173 TGCAGACAGCCACCTCGTCGGGGGCGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGC 49114 Query 145701 ATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCA 145760 | |||||||| || || || | ||| || || || | ||| || ||||||||||| | Sbjct 49113 ACTTGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGA 49054 Query 145761 TGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCA-AG-TCCTGCGC 145818 || | || ||| ||||| ||||| ||| | ||| || || || | ||| || Sbjct 49053 TGAAGGGGTTGCCGGTCTCGGTCTGCGACTCGAGGAT--GGCGTACCAGAGCTTCTGGGC 48996 Query 145819 ACGCAC-CTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACG 145877 || ||| ||| | |||||||| | ||||| | |||||| ||||||| Sbjct 48995 CTTGACGGTGC-GCTTGGCACGGCCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCAAACT 48937 Query 145878 CGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGC 145937 || |||||||| || | |||||||| |||| |||||| ||||| |||||||| ||| Sbjct 48936 CGTCGCCGTAGCAGTCAGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGC 48877 Query 145938 CGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGC 145997 |||| | ||| | || ||| || | ||| |||||||| || ||||| | | || | Sbjct 48876 CGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTC 48817 Query 145998 GCGCTTTGCA-ATCCTCAGCACCCATGTT-TCGCTTCAAATTAAGCACACT-ATAGATGT 146054 | || ||| ||||| || ||| | || | | || | ||| | ||| || Sbjct 48816 GGGC-ACGCACCTCCTCCTTGCCGTGGTTCTTGC-GGAGGTCGAGGA-ACTCAAAGACGT 48760 Query 146055 CCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGT 146111 ||| |||||| || |||| || | ||| | ||| || || ||||||||||||| Sbjct 48759 CCGAGTGCCATGGCTCAACGTAAATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGT 48700 Query 146112 CCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGC 146171 | |||| || | ||||||| |||||||| | ||||||| ||| ||| || || | Sbjct 48699 CGACGTAGCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGCACGATACCGTTGCTGACAC 48640 Query 146172 CGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGAC 146231 |||| ||| | || || ||| | ||| | ||| || | || | ||||| || Sbjct 48639 CGTTGGTACCGGCAATGTAGGAACCGGTGCCGCGGATGCAGTGGATGTTGAGGCCGATAC 48580 Query 146232 CGCCGCCGTACTTGGATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGCCGTCAATG 146290 | ||| || |||||| || ||| || ||| |||||| ||||||||||| || || Sbjct 48579 CACCGGCGGTCTTGGAGATCATGGCACACGTC-TTGAGCGTGTCGTAGATGCCATCGATC 48521 Query 146291 CTATCG--CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCG 146348 ||| |||| ||| || || |||||||| | | ||| | ||| || || | Sbjct 48520 GAGTCGTCCTTC--ATGGTGACGAGGAAGCACGACGAGAGCTGAGGGTGCGGGGTACCTG 48463 Query 146349 CCGAGAACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCGATACGTTT 146408 | ||| | || ||| ||||| ||||| ||| | ||| | || || | Sbjct 48462 CGTTGAAGAGGGTGGGGGAGGCGTGTGTAAAGTACTTTTGCGACATGAGGTTGTAGGTCT 48403 Query 146409 CGATAGCG-TCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGT 146467 | || ||| ||| | ||||| | ||| || || || | ||||| |||||||||||||| Sbjct 48402 CAATGGCGCTCTCG-ATGTCCTGGCCGTGGATACCGACGGCGACACGCATGAGCATGTGC 48344 Query 146468 TGGGGCCGCTCCGCCAC 146484 ||||| ||||| || || Sbjct 48343 TGGGGACGCTCTGCGAC 48327 >seq11 Length=758843 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | |||||||||||| || |||||||||||| Sbjct 158470 CCACCACGGAGACGGAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGAA 158529 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| || |||| | ||||||||| || || ||| Sbjct 158530 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCAGGTGGG 158589 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | ||| |||| ||||| | Sbjct 158590 ATACCCTCCTTGTCTTGAATCTTGGCCTTGACGTTGTCGATAGTGTCGGAAGACTCCACC 158649 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGAC 131237 |||| ||| | || |||||||| ||||| || || || ||||||||||| Sbjct 158650 TCGAGGGTGATCGTCTTACCGGTCAGAGTCTTGACAAAGATCTGCATGAC 158699 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| ||| || || | || | ||| |||||| ||||||||||| || Sbjct 158014 CCGCCACGCAGACGGAGGACGAGGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCCGAA 158073 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| |||||||| || || |||| || ||||||||||| |||||| Sbjct 158074 AGAGTGCGACCATCCTCCAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCGGGAGGG 158133 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | |||||| | |||||||| Sbjct 158134 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATAGTATCCGAGGACTCGACA 158193 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| ||| || || || || || || || || || ||||| Sbjct 158194 TCGAGCGTAATGGTCTTGCCCGTGAGCGTCTTGACAAAGATTTGCAT 158240 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || |||||||| || || || | || | || |||||| ||||||||||| ||| Sbjct 158242 CCTCCGCGCAATCGAAGGACAAGGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGGAG 158301 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| |||||||| || ||| | || | ||||||||||| || ||| Sbjct 158302 AGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCAGGCGGG 158361 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || || | | || | || || | ||||||| Sbjct 158362 ATACCCTCCTTGTCCTGGATCTTGGCTTTCACATTGTCGATCGTGTCCGAAGACTCGACC 158421 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || || || || || |||||||||||||| Sbjct 158422 TCCAGTGTGATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 158468 >seq9 Length=823499 Score = 138 bits (152), Expect = 1e-27 Identities = 335/502 (67%), Gaps = 13/502 (3%) Strand=Plus/Minus Query 46100 AGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGTA 46159 ||||| ||||||||||| || ||||||| | || ||| ||||||||||||||| Sbjct 594089 AGAAAGCCGACTGGGCGCTGCGATGGATCAGCGACAAGCGCGCCACTTTCGCCGAGCGTC 594030 Query 46160 TGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTT 46219 | || |||||||| || || ||| |||| || || ||| || ||| ||||||| | Sbjct 594029 TCGTCGCCTTTGCCGCCGTTGAAGGCATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCT 593970 Query 46220 ACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGC 46278 |||| || | || | |||||||||| || || || ||||||||| || |||||| Sbjct 593969 GGCTCAAGAAGCGCGGTC-TCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCGCGC 593911 Query 46279 GACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACAAG 46338 ||||| || ||||| || |||||||| || ||| || | || | | | ||| Sbjct 593910 GACGAAGGTCTGCACACCGACTTTGCCTGCCTCCTCTTCA------GCCACCTCAAGAAG 593857 Query 46339 CTTGC---GCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAG 46395 | ||| || ||||||||||| | || ||| | || || | ||| ||| |||| Sbjct 593856 CGTGCACACCCGGACACCGTGCTCAAAATCATCACCCAAGCCGTCGACATCGAGGTGGAG 593797 Query 46396 TTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCAC-AGTCAATGTGCGA 46454 || || || | || | ||| | ||| || || ||| || | || | ||| | | Sbjct 593796 TTCTTGACTACTGCCATCCCCTGTCGCCTCCTCGGTATG-TCGAGCGAGGCCATGCACAA 593738 Query 46455 CTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCA 46514 |||||| ||| || || || || ||||||| ||| | ||| || | Sbjct 593737 GTACATCAAGTACGTCGCCGATCGCTTGCTCGTTTCGCTCGGAAATCCGGTTCACTACGG 593678 Query 46515 CGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTT 46574 || | || || || || || ||| | |||||||| |||| || || || || ||||| Sbjct 593677 CGAGAGCTGCCCGTTCGATTTCATGCAGAACATCTCATTGGAAGGTAAGACCAACTTTTT 593618 Query 46575 CGAAAAGCGCGTCGGCGAGTAT 46596 ||| ||| |||| |||||| Sbjct 593617 CGAGAAGAAGGTCGCAGAGTAT 593596 >seq18 Length=577775 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| || || | |||||||||||| || |||||||| || Sbjct 283443 CCACCACGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 283502 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||| | |||||| |||||||| || ||| |||| | ||||||||||| || ||| Sbjct 283503 AGGGTGTGGCCGTCCTCAAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 283562 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | ||||||| Sbjct 283563 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCGACC 283622 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| ||||| || || || || ||||| |||||||| Sbjct 283623 TCGAGAGTGATGGTCTTACCCGTGAGGGTCTTAACGAAGATCTGCAT 283669 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||||| || || || | ||||||||||| || || ||||| ||| Sbjct 203383 CCTCCACGGAGACGCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGAA 203442 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||| || ||||||||||| || | || | |||||||| || || ||| Sbjct 203443 AGGGTACGGCCGTCTTCAAGCTGCTTGCCGGCAAAAATAAGCCGCTGCTGATCGGGTGGG 203502 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | || | || || | |||||||| Sbjct 203503 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACC 203562 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || ||||| ||||| || || || |||||||| Sbjct 203563 TCGAGAGTGATGGTCTTGCCGGTCAGAGTCTTGACAAAGATCTGCAT 203609 >seq1 Length=2015588 Score = 102 bits (112), Expect = 8e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | || | ||||||||||| || |||||||| || Sbjct 1818678 CCACCACGCAGACGGAGGACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 1818619 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| ||| |||| | ||||||||||| || ||| Sbjct 1818618 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 1818559 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | | | || || | |||||| | Sbjct 1818558 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTTGATGGTGTCCGAGGACTCCACC 1818499 Query 131188 TCGACGGTAACGGTTTTACCGGTT 131211 |||| ||||| ||| ||||| ||| Sbjct 1818498 TCGAGGGTAATGGTCTTACCTGTT 1818475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012392888960