Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq18 102 7e-17
>seq18
Length=577775
Score = 102 bits (112), Expect = 7e-17
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || || | || |||| || ||||| |||||||| || || ||||||||||
Sbjct 203383 CCTCCACGGAGACGCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGAA 203442
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | |||| || | || ||||| ||| ||||||||||||| || || ||
Sbjct 203443 AGGGTACGGCCGTCTTCAAGCTGCTTGCCGGCAAAAATAAGCCGCTGCTGATCGGGTGGG 203502
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||| || ||||| || || || ||| || | | | | ||||| || |||
Sbjct 203503 ATGCCTTCCTTGTCTTGGATCTTGGC--CTTGACGTTGTCGATGGTGTCAGAGGACTCGA 203560
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| | |||||||| || |||||||| || |||||||| ||||||||
Sbjct 203561 CCTCGAGAGTGATGGTCTTGCCGGTCAGAGTCTTGACAAAGATCTGCAT 203609
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405087659346310
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |