Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq18 129 5e-25 seq11 114 1e-20 >seq18 Length=577775 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||| ||||||| || ||||||| |||| || ||||| ||| Sbjct 203609 ATGCAGATCTTTGTCAAGACTCTGACCGGCAAGACCATCACTCTCGAGGTCGAGTCCTCT 203550 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| || ||| ||||| ||||| || ||||| || || Sbjct 203549 GACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCACCCGATCAG 203490 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 |||||| |||||||||||||||| || | ||||| | || || | ||| |||||| Sbjct 203489 CAGCGGCTTATTTTTGCCGGCAAGCAGCTTGAAGACGGCCGTACCCTTTCCGACTACAAT 203430 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGT 25207 || || || || || ||||| || || || Sbjct 203429 ATCCAGAAGGAGTCGACGCTCCACTTGGT 203401 >seq11 Length=758843 Score = 114 bits (126), Expect = 1e-20 Identities = 151/207 (73%), Gaps = 8/207 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||| |||||||||| | ||||| |||| |||||||| || Sbjct 158696 ATGCAGATCTTTGTCAAGACTCTGACCGGTAAGACGATCACCCTCGAGGTGGAGTCTTCC 158637 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||||||||| |||| | || || | ||| ||||| || || || |||||||| Sbjct 158636 GACACTATCGACAACGTCA---AGGCCAAGATTCA-AGACAAGGAGGGTATCCCACCTGA 158581 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || ||||| | || ||||||||||| || | || || | ||||| | |||||| Sbjct 158580 TCAGCAGCGTCTCATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGCACCCTTTCCGATTA 158521 Query 25175 CAATATTCAAAAAGAATCCACGCTACA 25201 ||| || || || || || || || || Sbjct 158520 CAACATCCAGAAGGAGTCGACCCTCCA 158494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327635598235