Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq12 91.5 3e-13
>seq12
Length=665503
Score = 91.5 bits (100), Expect = 3e-13
Identities = 130/182 (71%), Gaps = 6/182 (3%)
Strand=Plus/Plus
Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGC- 280237
|||||||| ||| |||||||||| ||||| |||| || | || || ||| || |
Sbjct 460540 GGACCCAACGGTTCGGGTAAGTCGACCCTTGTCAAGCTCATCGTCGGTGACACCGAGCCT 460599
Query 280238 --CACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCAC 280295
| ||| | | | |||||||| |||||| || || | ||||||||| ||||||
Sbjct 460600 GGCTCTGGTGAGA---TGTGGAAGCACCCCAACTTGGTCATCGGTTACGTCGCCCAGCAC 460656
Query 280296 GCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGC 280355
|| ||||||||||| || | ||||| |||| ||| ||| | | ||||| | |||||
Sbjct 460657 GCCTTCCACCACATTGACCAGCACCTCGACAAGACCCCTCTCGACTACATGCTCTGGCGT 460716
Query 280356 TA 280357
||
Sbjct 460717 TA 460718
Score = 84.2 bits (92), Expect = 4e-11
Identities = 123/174 (71%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|| ||||| || || |||| | ||||||||||| || |||| ||||| ||||| |||
Sbjct 459706 GGCGAGGACCTTTGCAACTGCCAGTTCTCGCTCGCCTACGGTGCCAAGATCCTGCTCAAC 459765
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|| || ||| ||||||||||| || ||| |||||| ||||| || || |
Sbjct 459766 ACTGCCACCCTGCGTCTCAAGCGTGGCCACAAGTACGGTCTCTGCGGTCGTAACGGTTCC 459825
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCT 279518
|| ||| || || ||||| ||||| | ||||| ||| | || || || |||
Sbjct 459826 GGAAAGTCGACCCTCATGCGTGCCATCACCAACGGCCAGGTCGAGGGTTTCCCT 459879
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027835891328029
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |