Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq18 185 2e-41
seq11 158 2e-33
seq19 129 1e-24
seq9 100 5e-16
>seq18
Length=577775
Score = 185 bits (204), Expect = 2e-41
Identities = 177/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| || || ||||| |||||||| ||||| ||||| || ||||| || || |||||
Sbjct 203383 CCTCCACGGAGACGCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGAA 203442
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || ||||| | |||||| ||||| || || || | || || ||||||||
Sbjct 203443 AGGGTACGGCCGTCTTCAAGCTGCTTGCCGGCAAAAATAAGCCGCTGCTGATCGGGTGGG 203502
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||||||||||||||| ||||| ||||||||| ||||||||||| | || || ||
Sbjct 203503 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACC 203562
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| || || || || |||||||| || ||||||||
Sbjct 203563 TCGAGAGTGATGGTCTTGCCGGTCAGAGTCTTGACAAAGATCTGCAT 203609
Score = 167 bits (184), Expect = 4e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| |||||||| || | || | ||| || || || || || |||||||| || |||||
Sbjct 203611 CCCCCGCGAAGACGGAGGACGAGGTGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGAA 203670
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || || || || |||| || || ||||||||
Sbjct 203671 AGAGTGCGGCCGTCCTCGAGCTGCTTTCCTGCAAAGATAAGTCGCTGCTGATCGGGTGGG 203730
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||||||||||||||| ||||| ||||||||| ||||||||||| | || || ||
Sbjct 203731 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACC 203790
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||||||| || || ||||| ||||| || || ||||||||
Sbjct 203791 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTAACAAAGATCTGCAT 203837
Score = 161 bits (178), Expect = 2e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | |||||||| || || ||||| || |||||||| || || ||
Sbjct 283443 CCACCACGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 283502
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || || || || | |||||| || ||||| || || | || |||||||| ||
Sbjct 283503 AGGGTGTGGCCGTCCTCAAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 283562
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| |||||||| ||||||||||| | || || ||
Sbjct 283563 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCGACC 283622
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| || |||||||||||||| ||||| ||||||||
Sbjct 283623 TCGAGAGTGATGGTCTTACCCGTGAGGGTCTTAACGAAGATCTGCAT 283669
>seq11
Length=758843
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||| ||| || || ||||| || |||||||| ||||||||
Sbjct 158470 CCACCACGGAGACGGAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGAA 158529
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| ||||| || ||||| | || || || |||||
Sbjct 158530 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCAGGTGGG 158589
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||||||||||||||| ||||||||| ||||| ||||| | || || ||
Sbjct 158590 ATACCCTCCTTGTCTTGAATCTTGGCCTTGACGTTGTCGATAGTGTCGGAAGACTCCACC 158649
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||| || || || || || |||||||| || ||||||||
Sbjct 158650 TCGAGGGTGATCGTCTTACCGGTCAGAGTCTTGACAAAGATCTGCAT 158696
Score = 143 bits (158), Expect = 5e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|||||||| | || | || | ||| | |||| ||| || || ||||| || ||||||
Sbjct 158242 CCTCCGCGCAATCGAAGGACAAGGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGGAG 158301
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || ||||| ||||||| || ||||| || ||
Sbjct 158302 AGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCAGGCGGG 158361
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| || || || ||||| ||||| | || || ||
Sbjct 158362 ATACCCTCCTTGTCCTGGATCTTGGCTTTCACATTGTCGATCGTGTCCGAAGACTCGACC 158421
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| ||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct 158422 TCCAGTGTGATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 158468
>seq19
Length=568126
Score = 129 bits (142), Expect = 1e-24
Identities = 872/1378 (63%), Gaps = 47/1378 (3%)
Strand=Plus/Minus
Query 30794 AATGGCGTTTGCAGCAGGCTTGCTTCTGCAG-TAATACATAAGCGTCTTGAGACCCTTCT 30852
||||||||| | ||||||||| | | |||| || || || ||||||||||||||||
Sbjct 50087 AATGGCGTTGGAGGCAGGCTTGGTAC-GCAGGTAGTAGGTACCGGTCTTGAGACCCTTCT 50029
Query 30853 TCCATGCATAGAACAGCATGGAAGACAT-TGACTTCATAGAG-GGCGCTGCAACGAAGAG 30910
|||| | ||||| |||| || | | || | || || ||||| | | | |
Sbjct 50028 TCCAGCCGTAGAAGTGCATCGAGGTGAGCTGGC--CAAAGGTAGGCGCCGAGAGGTGAAT 49971
Query 30911 GTTCATGCTCTGTGTCTGGTCAACAAACGGACCGCGGTCTGCTGCAAGGTCAATGACGGT 30970
||| | ||| | |||| | || | ||| ||||| || || | ||| |||| ||
Sbjct 49970 GTTGAGCGACTGCGACTGGCAGATGAAAGCACCACGGTCGGCGGCCATGTCGATGATGGC 49911
Query 30971 CTTCATAGACAGCTCCCATGCGGTCTTGTAGATTGCCTTGA-GCTCAGGGTGGATGCCAA 31029
|||| | |||||| |||||||||||| ||||| || || |||||||
Sbjct 49910 CTTCTGGCTGATCTCCCAGACGGTCTTGTAGAGCTTCTTGATGCGGTCGG-GGATGCCG- 49853
Query 31030 TGACACGTT--GGATGGACCCCCCGTTGGCAATAATCTGGTTCTTCATGGCCTCGGACCA 31087
| |||||| ||||||| || |||| || || || |||||||||| | ||| |||
Sbjct 49852 -GGCACGTTCTGGATGGAACCGCCGTGAGCGATGATGCGGTTCTTCATCGTGTCGTTCCA 49794
Query 31088 CGTGCCACGAGCGATGAGGTCGCGCACGAGGTAGTTGTTGACCACAGGGAACTCTCCAGC 31147
| || | ||| ||| ||||| | | | ||| ||||| ||||||| || ||
Sbjct 49793 CAGACCCTGCTCGACGAGCTCGCGGAGCAACCAAGGGTTCACCACCTGGAACTCACCGGC 49734
Query 31148 AAGGGTCCGGCGGCTGTACAGATTAGAAGTGATCGGCTCCATAGC-CTCTACGGACCCGC 31206
|| || || ||| | || || ||| ||||| | ||| ||| | | |||
Sbjct 49733 GAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGCTCGA-AGCACTCGTTGAAGCCGA 49675
Query 31207 AGATTTGCGCGGTGGATGCGGTGGGCATCAGCGCGGTGGTCAGCGAATTCCTGACACCCT 31266
||| || ||| || ||||||||||| | ||| ||||| || | | ||| |
Sbjct 49674 GGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGCAGAAGCGAGTTGCGCAGACCGT 49615
Query 31267 TCTTGACGCGCTCTTCGAGGGTCTTC----CAGTCAAGGC---GAGTTACCGGCTCGGTT 31319
|||| ||| |||| || ||| | | | || | ||| | ||| |||
Sbjct 49614 GCTTG--GCGATCTT----GGCCTTGAGCTCGGCCCAGTCCCAGAGGT-CCGAGGGGGTG 49562
Query 31320 ---CCCCAGAGGTGATACTGCATCACACCACGAGACGCGGGAGACCCCTCAAAGGTAGGA 31376
||||| | || ||||||| | |||| | || ||||| || || | ||||
Sbjct 49561 ACGCCCCACATGTCGTACTGCAGCTCACCCTGCGAAGCGGGCGAGCCGGCGTAGGTCTCG 49502
Query 31377 TGGGGACCGTGCTCTTCCGCGAGTTCGCAAGAGGCCTCCACCGCTGCAAAGTAAATATTC 31436
| || ||||||| | || || ||||| || ||| | || || ||| || ||
Sbjct 49501 TAGGTGCCGTGCTGCTGAGCCAGCTCGCACGATCGCTCGAGAGCGGCGTGGTAGATGGTC 49442
Query 31437 TCAAAGATTTCCCGGTTGAGGTTCTTGGCCGCGTCAGAGTCAAAAGGCAT-GCGCAGCTT 31495
|| ||||| | | |||||| ||| || ||| ||||| ||| | || || |
Sbjct 49441 TCGAAGATATGCACGTTGAGACGACGAGCCTCGGGAGACTCAAA-GGCGTAGCCCATGAT 49383
Query 31496 GAAGAACACGTCCTGAAGACCCTGGACACCCACTCCAATTGGGCGCCGGCGCATGTTAC- 31554
| ||| |||| ||||||||||||||| | || || || || ||||||||||
Sbjct 49382 CATGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATGGGACGGTGGCGCATGTTGGA 49323
Query 31555 TAGTCTTCGCCTCGGGAATTGCGTAGGACATGACGTCAATGCTCTTGTCGAGGTTCTTGG 31614
| | | ||||| | | |||| | ||| ||| ||| |||||| |||||||||
Sbjct 49322 TCGACGG-GCCTCCTCGACGGGGTAGTAGTTGATGTCGATGATCTTGTTAAGGTTCTTG- 49265
Query 31615 CCAGAAT--CTTCACGTGCTTGCGAAGGTCCTCAAAGTCGTA------GGCACCGTTCTT 31666
|||| ||| || || | | || | |||||||| ||| || |
Sbjct 49264 -CAGATGGCCTTGGCGACCTCGTGCAGACGTTTGAAGTCGTACGTCTTGGCGACGGGGTC 49206
Query 31667 GACGTAGTTCTGGAGGACGAT-GCTTCCAATGACACACACCGCCGTTTCGTCCGTAGAAG 31725
|| | || | ||||| |||| | |||| | || || ||| ||||| | |
Sbjct 49205 GATGAAGGTGGGGAGGGCGATCGAGGCCAA-GTTGCAGACAGCCACCTCGTCGGGGGCGC 49147
Query 31726 TGTATTCGACAATCTCGGCACAAAGATTGCTGCCCGTGATGGTGCCGGCATTGGACTGCA 31785
|||| |||| |||||||| || | ||| || | ||||||||||| || |||
Sbjct 49146 TGTACTCGATAATCTCGGTGCACAAGTTGGAGCACTTGATGGTGCCGAGGTTCTTCTGGT 49087
Query 31786 TGTTCTTCACGTTCACGCTGTCCTTGTTGAGCACGTAAGGCATGCCCGTCTCGATCTGCG 31845
|| |||| ||| || ||||||| ||| | | | || |||| |||||| ||||||
Sbjct 49086 TGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGATGAAGGGGTTGCCGGTCTCGGTCTGCG 49027
Query 31846 TGATGATCATCGCATTCCAGACATCGCGCGCTTTGACGACTTTCTTCGCACGCCCCTCGG 31905
|| || || | ||||| | | || |||||| ||| ||||| |||||||
Sbjct 49026 ACTCGAGGATGGCGTACCAGAGCTTCTGGGCCTTGACGGTGCGCTTGGCACGGCCCTCGG 48967
Query 31906 ACTCGTAGCGAAGATACAGGTCCTCGTACTCCTTGCCAAAGGCATCGGTTAGACCGGGAC 31965
||||||||| || ||| ||| |||| | ||| || || | || ||||| |
Sbjct 48966 CCTCGTAGCGCTCGTAGAGGCGCTCAAACTCGTCGCCGTAGCAGTCAGCGAGGCCGGGGC 48907
Query 31966 ACTCCTTGGGGTCGAAGAGCGACCATGCGACATCGGCCTCTACTCGCTTCATGAACAGGT 32025
|||| |||||| | ||||||||| || | | ||| || | ||||||||| || |
Sbjct 48906 ACTCGTTGGGGCACATGAGCGACCAGTCGCCGTTCTGCTCGACCCTCTTCATGAAGAGAT 48847
Query 32026 CGTTCAGCCACATCGCGTAAAACAGATTCCTGGCGCGTTGGGTCTCCTCACCCTGGTTAC 32085
|| || ||| | ||||| || || | | ||| || ||||| || |||||
Sbjct 48846 CGGGCACCCAGAGTGCGTAGAAGAGCTCTCGGGCACGCACCTCCTCCTTGCCGTGGTTCT 48787
Query 32086 GTCGGAGCAGCAGGAAGTCCATGATGTCGGGGTGGTGGGGCTCGAGGTACACGGCGAA 32143
||||| ||||| || | || ||| | ||| ||||| | ||| | ||| ||
Sbjct 48786 TGCGGAGGTCGAGGAACTCAAAGACGTCCGAGTGCCATGGCTCAACGTAAATGGCAAA 48729
>seq9
Length=823499
Score = 100 bits (110), Expect = 5e-16
Identities = 360/554 (65%), Gaps = 37/554 (7%)
Strand=Plus/Plus
Query 10253 GTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCCAGACCGGGCATGAGCCC 10312
||| || || |||||||| ||||| ||||||||| || |||||||||||||| ||
Sbjct 593896 GTGCAGACCTTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACC 593955
Query 10313 CCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAACAGAAGA--CCCTCCACG 10370
|| || |||||||| |||| | ||| || ||||||| |||||| || || |||
Sbjct 593956 GCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGA--AGAAGATGCCTTCAACG 594013
Query 10371 CACACCCAGGCGACGAGGCGCTCTGCGAA---GGAGCGGTCG-CGCGAAAAGTATTTCG- 10425
| |||||||||| ||||| ||||| || ||| | | ||| | | |||
Sbjct 594014 GCGGCAAAGGCGACGAGACGCTCGGCGAAAGTGGCGCGCTTGTCGCTGA---TCCATCGC 594070
Query 10426 AG-GCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGATAGCCTC---GAAGAGC 10481
|| ||||| | || |||| ||| | ||||| ||||||| || || || ||||
Sbjct 594071 AGCGCCCAGTCGGCTTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTCAAAGAGGAGC 594130
Query 10482 TTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAGGGAGTATTGCTCGCTG 10541
| | |||||| |||| ||| | || | ||| || ||||| ||| |
Sbjct 594131 TCGCGCTGCTCGGGCTCG---CGAATGTAGGTGTCGATGAGGAGCGAGTAGGTCTCCGAG 594187
Query 10542 TGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATACGTGCCGAGGGGTCCGTGACT 10601
|||| | |||| | |||| || ||||||| ||| ||| || | | ||
Sbjct 594188 TGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGAGCC------TCGGCGGCT 594241
Query 10602 T---CCTCGGCAAAGTTG------TTGTTCAGGTTCTCCATCACCATGCCATCGCTGCCT 10652
| |||||| || || | | |||||||| | || || || ||| |
Sbjct 594242 TGCACCTCGG---AGCTGAAACGCTCGACGAGGTTCTCGTTGACGATACCGTCGGAAGCG 594298
Query 10653 GCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCAGTTTTTCACGC 10712
|| |||||| |||||| |||| ||| |||||||| || | ||||| || || | |
Sbjct 594299 GCGAAGAAGGCGAGGACGTGCGAGATAAAGTGGCGTTCGTTGTCGTTGAGCTTGTTGTCC 594358
Query 10713 CAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGTGGCAACGGCC 10772
||||| | ||||| | || | || ||| || |||||||||| | || |||||
Sbjct 594359 CAGTCGTGGAGATCCTTGGAAAGGTCGATCTCTTCGGCGGTCCAGAAGGAAGCCTCGGCC 594418
Query 10773 TTCTTGTACATCTG 10786
|| |||||||| ||
Sbjct 594419 TTTTTGTACATTTG 594432
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921621605100680
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