Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq18 185 2e-41 seq11 158 2e-33 seq19 129 1e-24 seq9 100 5e-16 >seq18 Length=577775 Score = 185 bits (204), Expect = 2e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || ||||| |||||||| ||||| ||||| || ||||| || || ||||| Sbjct 203383 CCTCCACGGAGACGCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGAA 203442 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | |||||| ||||| || || || | || || |||||||| Sbjct 203443 AGGGTACGGCCGTCTTCAAGCTGCTTGCCGGCAAAAATAAGCCGCTGCTGATCGGGTGGG 203502 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||||||||| ||||| ||||||||| ||||||||||| | || || || Sbjct 203503 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACC 203562 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| || || || || |||||||| || |||||||| Sbjct 203563 TCGAGAGTGATGGTCTTGCCGGTCAGAGTCTTGACAAAGATCTGCAT 203609 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || |||||||| || | || | ||| || || || || || |||||||| || ||||| Sbjct 203611 CCCCCGCGAAGACGGAGGACGAGGTGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGAA 203670 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || || || || |||| || || |||||||| Sbjct 203671 AGAGTGCGGCCGTCCTCGAGCTGCTTTCCTGCAAAGATAAGTCGCTGCTGATCGGGTGGG 203730 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||||||||| ||||| ||||||||| ||||||||||| | || || || Sbjct 203731 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACC 203790 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || || ||||| ||||| || || |||||||| Sbjct 203791 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTAACAAAGATCTGCAT 203837 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||||||| || || ||||| || |||||||| || || || Sbjct 283443 CCACCACGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 283502 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || || || || | |||||| || ||||| || || | || |||||||| || Sbjct 283503 AGGGTGTGGCCGTCCTCAAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 283562 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| |||||||| ||||||||||| | || || || Sbjct 283563 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCGACC 283622 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| || |||||||||||||| ||||| |||||||| Sbjct 283623 TCGAGAGTGATGGTCTTACCCGTGAGGGTCTTAACGAAGATCTGCAT 283669 >seq11 Length=758843 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||| ||| || || ||||| || |||||||| |||||||| Sbjct 158470 CCACCACGGAGACGGAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGAA 158529 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| ||||| || ||||| | || || || ||||| Sbjct 158530 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCAGGTGGG 158589 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||||||||| ||||||||| ||||| ||||| | || || || Sbjct 158590 ATACCCTCCTTGTCTTGAATCTTGGCCTTGACGTTGTCGATAGTGTCGGAAGACTCCACC 158649 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || || || || |||||||| || |||||||| Sbjct 158650 TCGAGGGTGATCGTCTTACCGGTCAGAGTCTTGACAAAGATCTGCAT 158696 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 |||||||| | || | || | ||| | |||| ||| || || ||||| || |||||| Sbjct 158242 CCTCCGCGCAATCGAAGGACAAGGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGGAG 158301 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| ||||||| || ||||| || || Sbjct 158302 AGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCAGGCGGG 158361 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| || || || ||||| ||||| | || || || Sbjct 158362 ATACCCTCCTTGTCCTGGATCTTGGCTTTCACATTGTCGATCGTGTCCGAAGACTCGACC 158421 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||| || ||||| ||||| ||||||||||| |||||||| Sbjct 158422 TCCAGTGTGATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 158468 >seq19 Length=568126 Score = 129 bits (142), Expect = 1e-24 Identities = 872/1378 (63%), Gaps = 47/1378 (3%) Strand=Plus/Minus Query 30794 AATGGCGTTTGCAGCAGGCTTGCTTCTGCAG-TAATACATAAGCGTCTTGAGACCCTTCT 30852 ||||||||| | ||||||||| | | |||| || || || |||||||||||||||| Sbjct 50087 AATGGCGTTGGAGGCAGGCTTGGTAC-GCAGGTAGTAGGTACCGGTCTTGAGACCCTTCT 50029 Query 30853 TCCATGCATAGAACAGCATGGAAGACAT-TGACTTCATAGAG-GGCGCTGCAACGAAGAG 30910 |||| | ||||| |||| || | | || | || || ||||| | | | | Sbjct 50028 TCCAGCCGTAGAAGTGCATCGAGGTGAGCTGGC--CAAAGGTAGGCGCCGAGAGGTGAAT 49971 Query 30911 GTTCATGCTCTGTGTCTGGTCAACAAACGGACCGCGGTCTGCTGCAAGGTCAATGACGGT 30970 ||| | ||| | |||| | || | ||| ||||| || || | ||| |||| || Sbjct 49970 GTTGAGCGACTGCGACTGGCAGATGAAAGCACCACGGTCGGCGGCCATGTCGATGATGGC 49911 Query 30971 CTTCATAGACAGCTCCCATGCGGTCTTGTAGATTGCCTTGA-GCTCAGGGTGGATGCCAA 31029 |||| | |||||| |||||||||||| ||||| || || ||||||| Sbjct 49910 CTTCTGGCTGATCTCCCAGACGGTCTTGTAGAGCTTCTTGATGCGGTCGG-GGATGCCG- 49853 Query 31030 TGACACGTT--GGATGGACCCCCCGTTGGCAATAATCTGGTTCTTCATGGCCTCGGACCA 31087 | |||||| ||||||| || |||| || || || |||||||||| | ||| ||| Sbjct 49852 -GGCACGTTCTGGATGGAACCGCCGTGAGCGATGATGCGGTTCTTCATCGTGTCGTTCCA 49794 Query 31088 CGTGCCACGAGCGATGAGGTCGCGCACGAGGTAGTTGTTGACCACAGGGAACTCTCCAGC 31147 | || | ||| ||| ||||| | | | ||| ||||| ||||||| || || Sbjct 49793 CAGACCCTGCTCGACGAGCTCGCGGAGCAACCAAGGGTTCACCACCTGGAACTCACCGGC 49734 Query 31148 AAGGGTCCGGCGGCTGTACAGATTAGAAGTGATCGGCTCCATAGC-CTCTACGGACCCGC 31206 || || || ||| | || || ||| ||||| | ||| ||| | | ||| Sbjct 49733 GAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGCTCGA-AGCACTCGTTGAAGCCGA 49675 Query 31207 AGATTTGCGCGGTGGATGCGGTGGGCATCAGCGCGGTGGTCAGCGAATTCCTGACACCCT 31266 ||| || ||| || ||||||||||| | ||| ||||| || | | ||| | Sbjct 49674 GGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGCAGAAGCGAGTTGCGCAGACCGT 49615 Query 31267 TCTTGACGCGCTCTTCGAGGGTCTTC----CAGTCAAGGC---GAGTTACCGGCTCGGTT 31319 |||| ||| |||| || ||| | | | || | ||| | ||| ||| Sbjct 49614 GCTTG--GCGATCTT----GGCCTTGAGCTCGGCCCAGTCCCAGAGGT-CCGAGGGGGTG 49562 Query 31320 ---CCCCAGAGGTGATACTGCATCACACCACGAGACGCGGGAGACCCCTCAAAGGTAGGA 31376 ||||| | || ||||||| | |||| | || ||||| || || | |||| Sbjct 49561 ACGCCCCACATGTCGTACTGCAGCTCACCCTGCGAAGCGGGCGAGCCGGCGTAGGTCTCG 49502 Query 31377 TGGGGACCGTGCTCTTCCGCGAGTTCGCAAGAGGCCTCCACCGCTGCAAAGTAAATATTC 31436 | || ||||||| | || || ||||| || ||| | || || ||| || || Sbjct 49501 TAGGTGCCGTGCTGCTGAGCCAGCTCGCACGATCGCTCGAGAGCGGCGTGGTAGATGGTC 49442 Query 31437 TCAAAGATTTCCCGGTTGAGGTTCTTGGCCGCGTCAGAGTCAAAAGGCAT-GCGCAGCTT 31495 || ||||| | | |||||| ||| || ||| ||||| ||| | || || | Sbjct 49441 TCGAAGATATGCACGTTGAGACGACGAGCCTCGGGAGACTCAAA-GGCGTAGCCCATGAT 49383 Query 31496 GAAGAACACGTCCTGAAGACCCTGGACACCCACTCCAATTGGGCGCCGGCGCATGTTAC- 31554 | ||| |||| ||||||||||||||| | || || || || |||||||||| Sbjct 49382 CATGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATGGGACGGTGGCGCATGTTGGA 49323 Query 31555 TAGTCTTCGCCTCGGGAATTGCGTAGGACATGACGTCAATGCTCTTGTCGAGGTTCTTGG 31614 | | | ||||| | | |||| | ||| ||| ||| |||||| ||||||||| Sbjct 49322 TCGACGG-GCCTCCTCGACGGGGTAGTAGTTGATGTCGATGATCTTGTTAAGGTTCTTG- 49265 Query 31615 CCAGAAT--CTTCACGTGCTTGCGAAGGTCCTCAAAGTCGTA------GGCACCGTTCTT 31666 |||| ||| || || | | || | |||||||| ||| || | Sbjct 49264 -CAGATGGCCTTGGCGACCTCGTGCAGACGTTTGAAGTCGTACGTCTTGGCGACGGGGTC 49206 Query 31667 GACGTAGTTCTGGAGGACGAT-GCTTCCAATGACACACACCGCCGTTTCGTCCGTAGAAG 31725 || | || | ||||| |||| | |||| | || || ||| ||||| | | Sbjct 49205 GATGAAGGTGGGGAGGGCGATCGAGGCCAA-GTTGCAGACAGCCACCTCGTCGGGGGCGC 49147 Query 31726 TGTATTCGACAATCTCGGCACAAAGATTGCTGCCCGTGATGGTGCCGGCATTGGACTGCA 31785 |||| |||| |||||||| || | ||| || | ||||||||||| || ||| Sbjct 49146 TGTACTCGATAATCTCGGTGCACAAGTTGGAGCACTTGATGGTGCCGAGGTTCTTCTGGT 49087 Query 31786 TGTTCTTCACGTTCACGCTGTCCTTGTTGAGCACGTAAGGCATGCCCGTCTCGATCTGCG 31845 || |||| ||| || ||||||| ||| | | | || |||| |||||| |||||| Sbjct 49086 TGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGATGAAGGGGTTGCCGGTCTCGGTCTGCG 49027 Query 31846 TGATGATCATCGCATTCCAGACATCGCGCGCTTTGACGACTTTCTTCGCACGCCCCTCGG 31905 || || || | ||||| | | || |||||| ||| ||||| ||||||| Sbjct 49026 ACTCGAGGATGGCGTACCAGAGCTTCTGGGCCTTGACGGTGCGCTTGGCACGGCCCTCGG 48967 Query 31906 ACTCGTAGCGAAGATACAGGTCCTCGTACTCCTTGCCAAAGGCATCGGTTAGACCGGGAC 31965 ||||||||| || ||| ||| |||| | ||| || || | || ||||| | Sbjct 48966 CCTCGTAGCGCTCGTAGAGGCGCTCAAACTCGTCGCCGTAGCAGTCAGCGAGGCCGGGGC 48907 Query 31966 ACTCCTTGGGGTCGAAGAGCGACCATGCGACATCGGCCTCTACTCGCTTCATGAACAGGT 32025 |||| |||||| | ||||||||| || | | ||| || | ||||||||| || | Sbjct 48906 ACTCGTTGGGGCACATGAGCGACCAGTCGCCGTTCTGCTCGACCCTCTTCATGAAGAGAT 48847 Query 32026 CGTTCAGCCACATCGCGTAAAACAGATTCCTGGCGCGTTGGGTCTCCTCACCCTGGTTAC 32085 || || ||| | ||||| || || | | ||| || ||||| || ||||| Sbjct 48846 CGGGCACCCAGAGTGCGTAGAAGAGCTCTCGGGCACGCACCTCCTCCTTGCCGTGGTTCT 48787 Query 32086 GTCGGAGCAGCAGGAAGTCCATGATGTCGGGGTGGTGGGGCTCGAGGTACACGGCGAA 32143 ||||| ||||| || | || ||| | ||| ||||| | ||| | ||| || Sbjct 48786 TGCGGAGGTCGAGGAACTCAAAGACGTCCGAGTGCCATGGCTCAACGTAAATGGCAAA 48729 >seq9 Length=823499 Score = 100 bits (110), Expect = 5e-16 Identities = 360/554 (65%), Gaps = 37/554 (7%) Strand=Plus/Plus Query 10253 GTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCCAGACCGGGCATGAGCCC 10312 ||| || || |||||||| ||||| ||||||||| || |||||||||||||| || Sbjct 593896 GTGCAGACCTTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACC 593955 Query 10313 CCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAACAGAAGA--CCCTCCACG 10370 || || |||||||| |||| | ||| || ||||||| |||||| || || ||| Sbjct 593956 GCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGA--AGAAGATGCCTTCAACG 594013 Query 10371 CACACCCAGGCGACGAGGCGCTCTGCGAA---GGAGCGGTCG-CGCGAAAAGTATTTCG- 10425 | |||||||||| ||||| ||||| || ||| | | ||| | | ||| Sbjct 594014 GCGGCAAAGGCGACGAGACGCTCGGCGAAAGTGGCGCGCTTGTCGCTGA---TCCATCGC 594070 Query 10426 AG-GCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGATAGCCTC---GAAGAGC 10481 || ||||| | || |||| ||| | ||||| ||||||| || || || |||| Sbjct 594071 AGCGCCCAGTCGGCTTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTCAAAGAGGAGC 594130 Query 10482 TTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAGGGAGTATTGCTCGCTG 10541 | | |||||| |||| ||| | || | ||| || ||||| ||| | Sbjct 594131 TCGCGCTGCTCGGGCTCG---CGAATGTAGGTGTCGATGAGGAGCGAGTAGGTCTCCGAG 594187 Query 10542 TGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATACGTGCCGAGGGGTCCGTGACT 10601 |||| | |||| | |||| || ||||||| ||| ||| || | | || Sbjct 594188 TGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGAGCC------TCGGCGGCT 594241 Query 10602 T---CCTCGGCAAAGTTG------TTGTTCAGGTTCTCCATCACCATGCCATCGCTGCCT 10652 | |||||| || || | | |||||||| | || || || ||| | Sbjct 594242 TGCACCTCGG---AGCTGAAACGCTCGACGAGGTTCTCGTTGACGATACCGTCGGAAGCG 594298 Query 10653 GCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCAGTTTTTCACGC 10712 || |||||| |||||| |||| ||| |||||||| || | ||||| || || | | Sbjct 594299 GCGAAGAAGGCGAGGACGTGCGAGATAAAGTGGCGTTCGTTGTCGTTGAGCTTGTTGTCC 594358 Query 10713 CAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGTGGCAACGGCC 10772 ||||| | ||||| | || | || ||| || |||||||||| | || ||||| Sbjct 594359 CAGTCGTGGAGATCCTTGGAAAGGTCGATCTCTTCGGCGGTCCAGAAGGAAGCCTCGGCC 594418 Query 10773 TTCTTGTACATCTG 10786 || |||||||| || Sbjct 594419 TTTTTGTACATTTG 594432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621605100680