Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq19 547 1e-150
seq9 331 2e-85
>seq19
Length=568126
Score = 547 bits (606), Expect = 1e-150
Identities = 1435/2154 (67%), Gaps = 89/2154 (4%)
Strand=Plus/Minus
Query 243741 TGAACTGGACGG-GTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGT 243799
||||||| | || || || ||| | |||||| | ||||||||| | |||||||||||
Sbjct 50094 TGAACTGAATGGCGTTGGA-GGCAGGCTTGGTACGCAGGTAGTAGGTACCGGTCTTGAGA 50036
Query 243800 CCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCG 243859
|| | |||| ||| || |||||| | || |||| || ||| |
Sbjct 50035 CCCTTCTTCCAGCCGTAGAAGTGCATCGAGGTGAGCTG-----------GCCAAAGGTAG 49987
Query 243860 TCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCG 243919
| || | || | |||||| ||||| |||| || ||| | | || || |||
Sbjct 49986 GCGCCG-AGAGGTGAATGTTGAGCGACTGCGACTGGCAGATGAAAGCACCACGGTCGGCG 49928
Query 243920 GCCATGGTGATGAGGTCCTTCTGA--GATATCTCATACGCCGTCTTGTAGATGGGCTTGA 243977
|||||| ||||| | ||||||| ||| || || ||| |||||||||| |||||
Sbjct 49927 GCCATGTCGATGATGGCCTTCTGGCTGATCTCCCAGACG--GTCTTGTAGAGCTTCTTGA 49870
Query 243978 GGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGC 244037
| | ||||||| || | |||||| | || || ||| |||||| || |
Sbjct 49869 TGCGGTCGGGGATGCCGGGCACGTTCTGGATGGAACCGCCGTGAGCGATGATGCGGTTCT 49810
Query 244038 GCATGTTATCGTTCCACAGGCCC------AAGCGCTCCAGCGCCTCGACCAGGTGCCTGT 244091
||| | ||||||||||| ||| | | |||| ||| | |||| | | |
Sbjct 49809 TCATCGTGTCGTTCCACAGACCCTGCTCGACGAGCTC--GCGGAGCAACCAAGGG----T 49756
Query 244092 TCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCT 244151
|||||||||| ||||| || | ||||| || ||| ||||| |||| || ||||
Sbjct 49755 TCACCACCTGGAACTCACCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGCT 49696
Query 244152 CGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCA 244211
||| || ||| || ||| || ||||| || || || |||||||| | | ||
Sbjct 49695 CGAAGCACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGCA 49636
Query 244212 GCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACA 244271
| || ||| | || |||||| | ||| | |||||||| ||||||||| |
Sbjct 49635 GAAGCGAGTTGCGCAGACCGTGCTTGGCGATCTTGGCCTTGAGCTCGGCCCAGTCCCAGA 49576
Query 244272 TGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGA 244331
| ||||| || ||| |||||||||||| |||||||| |||| || |
Sbjct 49575 GGTCCGAGGGGG---------TGACGCCCCACATGTCGTACTGCAGCTCACCCT-GCGAA 49526
Query 244332 CGGGGCT-GCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCG 244390
|||| ||| |||||||| ||||| |||| |||| ||||||| || | |||
Sbjct 49525 GCGGGCGAGCCGGCGTAGGTCTCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCA-CGATCG 49467
Query 244391 -TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCG-CGGGCCTTGC 244448
||||| ||||||| |||||||||||||||||| | ||| | | || || |||| |
Sbjct 49466 CTCGAGAGCGGCGTGGTAGATGGTCTCGAAGATATGCACGTTGA-GACGACGAGCCTCGG 49408
Query 244449 CGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGC 244508
| |||| | |||||| ||||||||| ||||||| || ||||| || ||||| |
Sbjct 49407 GAGACTCAAAGGCGTAGCCCATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATAC 49348
Query 244509 CGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGT 244568
||||||| | ||| ||| ||||||| || ||| || |||||||| ||||| ||
Sbjct 49347 CGATGGGACGGTGGCGCATGTTGGATCGACGGGCCTCCTCGACGGGGTAGTAGTTGATGT 49288
Query 244569 CGATCACCTTGTTGAGGTT---GCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAA 244625
|||| | |||||| ||||| || | || | || |||| ||| ||| | | |
Sbjct 49287 CGATGATCTTGTTAAGGTTCTTGCAGATGGCCTTGG---CGACCTCGTGCAGACGTTTGA 49231
Query 244626 AGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGC 244685
|||||||| || || ||||| || | || | || | ||||||||
Sbjct 49230 AGTCGTAC--GT-------CTTGGCGACGGGG-TCG--ATGAAGGTGGGGAGGGCGATCG 49183
Query 244686 TGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGA 244745
||||| ||||||||| |||||||| || | | | |||||| || |||||||||||| |
Sbjct 49182 AGGCCAAGTTGCAGACAGCCACCTCGTCGGGGGCGCTGTACTCGATAATCTCGGTGCACA 49123
Query 244746 GGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCT 244805
||| ||||||||||||||| |||| || || ||| |||| ||| ||| ||||
Sbjct 49122 AGTTGGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCT 49063
Query 244806 TGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGT 244865
||||||| |||||||| ||||||||| ||| | |||||| | || |||||| |
Sbjct 49062 TGTAGAGGATGAAGGGGTTGCCGGTCTCGGTCTGCGACTCGAGGATGGCGTACCAGAGCT 49003
Query 244866 CCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCT 244925
| |||||||| || | || |||||| ||||||||||| ||| ||| ||
Sbjct 49002 TCTGGGCCTTGACGGTGCGCTTGGCACGGCCCTCGGCCTCGTAGCGCTCGTAGAGGCGCT 48943
Query 244926 CGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCC 244985
| |||||| ||| || || | |||||||||||| ||||||||||| ||
Sbjct 48942 CAAACTCGTCGCCGTAGCAGTCAGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGACC 48883
Query 244986 ACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGA 245045
| |||||| | || |||||||| ||||||||| ||||| | |||||| || | |||||
Sbjct 48882 AGTCGCCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGA 48823
Query 245046 GGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGA 245105
| || | || | | ||| ||| ||| |||||| | || || | || |||||||
Sbjct 48822 GCTCTCGGGCACGCACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAGA 48763
Query 245106 CGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCT 245165
|||| |||||| ||||| | ||| | || | ||| ||||| ||||||||||| ||||
Sbjct 48762 CGTCCGAGTGCCATGGCTCAACGTAAATGGCAAAGGCACCGGGACGCTTGTTGCCACCCT 48703
Query 245166 GGTCCACCATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTA 245221
|||| | | | || ||| |||||||| ||| || | ||||| || |||||
Sbjct 48702 GGTCGA----CGTAGCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGCACGATACCGTTG 48647
Query 245222 GAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATG 245281
| |||||||| || ||||||| || |||| | || | | |||| | |
Sbjct 48646 CTGACACCGTTGGTACCGGCAATGTAGGAACCGGTGCCGCGGATGCAGTGGATGTTGAGG 48587
Query 245282 CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCC 245341
|| | || |||||| ||||||||| | ||| || |||||| ||||| |||||
Sbjct 48586 CCGATACCACCGGCGGTCTTGGAGATCATGGCACACGTCTTGAGCGTGTCGTAGATGCCA 48527
Query 245342 TCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTG 245401
|| || ||| ||||||| ||| || ||||| || || ||||| || | ||| |
Sbjct 48526 TCGATCGAGTCGTCCTTCATGGTGACGAGGAAGCACGACGAGAGCTGAGGGTGCGGGGTA 48467
Query 245402 CACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTAC 245461
| | |||||| || |||||| |||||| |||||||| ||| | || |||
Sbjct 48466 CCTGCGTTGAAGAGGGTGGGGGAGGCGTGTGTAAAGTACTTTTGCGACATGAGGTTGTAG 48407
Query 245462 GTCTGGAGCAGAGC-GTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGT 245520
|||| | | || ||||||| | ||||||||| | |||| | |||||| |
Sbjct 48406 GTCT-CAATGGCGCTCTCGATGTCCTGGCCGTGGATACCGACGGCGACACGCATGAGCAT 48348
Query 245521 GTGCTGGGGCGTCTCGATGGGTCCCTCGGGTCCCT--TGAGCATGTAGGAGCGCTCGAGC 245578
||||||||| ||| || | || | || | ||| | ||||||||||||||||
Sbjct 48347 GTGCTGGGGACGCTC--TGCGACCTTGCCGTTGATGCGGAGGAGGTAGGAGCGCTCGAGC 48290
Query 245579 GTCTTGAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAGT 245638
|||||||| || ||| | |||| |||||| | || ||| ||| | ||||||
Sbjct 48289 GTCTTGAAGCCGAAGAAGTTGTAGTGGAAGTCGCGCTCGTAGATGATGGCCGAGTCGAGC 48230
Query 245639 CTCTCGGCGTGCTTC-TGACTGACCTCGTAAAACTTTTGCGCTATGAGGGGAGCCCTGA- 245696
|| ||||| | |||| ||||| ||| | || || | ||| || |||
Sbjct 48229 TGGTCCTTGTGCTCCATGAC-GACCTTGTAGGTGGCGTCCGAGATCATGGG-GCTGTGAC 48172
Query 245697 GCCCGGTGTCCGGATTGACGTTGAACCAGAGCCTCTTGCAC-ACCTCCGAGAACTTGGGG 245755
| ||| | | || ||||||| |||| || || || |||| || ||
Sbjct 48171 GGCCGTTCTTGGGGTTGACGTACTCGTAGAG-GTCCTGGACGACCTGGCTAAAGTTCTTC 48113
Query 245756 CTGGTGAGCTTATGCAGGTTGGTGACTGCTATGCGCGCCGCCA--ACTTGCTGTAGTCGG 245813
|||| ||| |||| |||| ||| || || |||||||| | || || |||||| |
Sbjct 48112 TTGGTCTCCTTGTGCAAGTTGCTGATGGCGATACGCGCCGCGAGGAC-AGC-GTAGTCTG 48055
Query 245814 GGTGAGTGGTGGTCATGTTGGAGGCCGTGTGGGCCAGC-AGCTCGTCAATCTCG 245866
|||| ||||||||| ||| || ||| || | || |||| || | ||| | ||||
Sbjct 48054 GGTGGGTGGTGGTCTTGTAGGCGGCGGTCTCGG-CAGCAAGGTTGTCGAGCTCG 48002
>seq9
Length=823499
Score = 331 bits (366), Expect = 2e-85
Identities = 599/855 (70%), Gaps = 26/855 (3%)
Strand=Plus/Minus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||| ||||| || ||| |||||||||||| ||||| |||||
Sbjct 594438 ATCTGGCAAATGTACAAAAAGGCCGAGGCTTCCTTCTGGACCGCCGAAGAGATCGACCTT 594379
Query 42360 GCCAAGGACACGGCCGGCTGGGAGT-CACTGTCT--GAGAACGAAA---AGTTTTTCCTC 42413
||||||| || |||||| || || || |||||| | ||| || ||
Sbjct 594378 TCCAAGGATCTCCACGACTGGGACAACAAGCTCAACGACAACGAACGCCACTTTATC-TC 594320
Query 42414 AAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACC 42473
| | | || |||||||||||||| || ||||| || ||||| |||||||| | |
Sbjct 594319 GCA--CGTCCTCGCCTTCTTCGCCGCTTCCGACGGTATCGTCAACGAGAACCTCGTCGAG 594262
Query 42474 AGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCC 42533
| |||| |||||||| | ||||| || ||||||||||| ||||||||
Sbjct 594261 CGTTTCAGCTCCGAGGTGCAAGCCGCCGAGGCTCGTTGCTTCTACGGTTTCCAGATCATG 594202
Query 42534 ATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCC 42593
|| |||||| | ||||| ||| ||| | || || |||| ||||| | || |||
Sbjct 594201 ATGGAGAACATCCACTCGGAGACCTACTCGCTCCTCATCGACACCTACATTCGCGAGCCC 594142
Query 42594 GTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCG 42653
| |||| | || || | ||| | ||||| || ||| | ||||| |||| ||
Sbjct 594141 GAGCAGCGCGAGCTCCTCTTTGACGCCGTCGAGACCATCCCCGTCGTCAAGCAGAAAGCC 594082
Query 42654 GACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGC 42712
||||||||||| |||||| || | | | ||| || |||| |||| | || || ||
Sbjct 594081 GACTGGGCGCTGCGATGGATC-AGCGACAAGCGCGCCACTTTCGCCGAGCGTCTCGTCGC 594023
Query 42713 CTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAA 42772
|||| ||||||| || |||||||||||||| ||| |||||||||||||||||||||||||
Sbjct 594022 CTTTGCCGCCGTTGAAGGCATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGCTCAA 593963
Query 42773 GCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831
| || ||| || |||||||| ||||||||||| ||||| |||||| | ||||| |
Sbjct 593962 GAAGCGCGGTCTC-ATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGAAG 593904
Query 42832 GGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCA-CAAGCCCTCG 42890
| ||||| | ||||||||||||||||| ||| |||||||||| | | | || | |
Sbjct 593903 GTCTGCACACCGACTTTGCCTGCCTCCTCTTC---AGCCACCTCAAGAAGCGTGCACAC- 593848
Query 42891 AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACG 42950
||| || | |||||||| | ||||| || |||||| ||||||| | ||
Sbjct 593847 CCGGACACCGTGCTCAAAATCATCACCCAAGCCGTCGACATCGAGGTGGAGTTCTTGAC- 593789
Query 42951 CAGTCGCTGCCCGTGTC-CCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCA 43009
| | | ||| |||| ||| |||| ||| ||| |||| |||||||||| |
Sbjct 593788 TACTGCCATCCCCTGTCGCCTCCTCGGTATGTCGAGCGAGGCCATGCACAAGTACATCAA 593729
Query 43010 GTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCG--CCTCTACAACACGCC 43066
|||||||||||| | | || || | | | || | ||| | |||| | |
Sbjct 593728 GTACGTCGCCGATCGCTTGCTCGTTTC-GCTCGG--AAATCCGGTTCACTACGGCGAGAG 593672
Query 43067 GTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAA 43126
||||| ||||| || ||| |||||||||| ||||| || ||||||||||||||||||||
Sbjct 593671 CTGCCCGTTCGATTTCATGCAGAACATCTCATTGGAAGGTAAGACCAACTTTTTCGAGAA 593612
Query 43127 GCGCGTCGCCGACTA 43141
| ||||| || ||
Sbjct 593611 GAAGGTCGCAGAGTA 593597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944338385507440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |