Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq19 547 1e-150 seq9 331 2e-85 >seq19 Length=568126 Score = 547 bits (606), Expect = 1e-150 Identities = 1435/2154 (67%), Gaps = 89/2154 (4%) Strand=Plus/Minus Query 243741 TGAACTGGACGG-GTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGT 243799 ||||||| | || || || ||| | |||||| | ||||||||| | ||||||||||| Sbjct 50094 TGAACTGAATGGCGTTGGA-GGCAGGCTTGGTACGCAGGTAGTAGGTACCGGTCTTGAGA 50036 Query 243800 CCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCG 243859 || | |||| ||| || |||||| | || |||| || ||| | Sbjct 50035 CCCTTCTTCCAGCCGTAGAAGTGCATCGAGGTGAGCTG-----------GCCAAAGGTAG 49987 Query 243860 TCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCG 243919 | || | || | |||||| ||||| |||| || ||| | | || || ||| Sbjct 49986 GCGCCG-AGAGGTGAATGTTGAGCGACTGCGACTGGCAGATGAAAGCACCACGGTCGGCG 49928 Query 243920 GCCATGGTGATGAGGTCCTTCTGA--GATATCTCATACGCCGTCTTGTAGATGGGCTTGA 243977 |||||| ||||| | ||||||| ||| || || ||| |||||||||| ||||| Sbjct 49927 GCCATGTCGATGATGGCCTTCTGGCTGATCTCCCAGACG--GTCTTGTAGAGCTTCTTGA 49870 Query 243978 GGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGC 244037 | | ||||||| || | |||||| | || || ||| |||||| || | Sbjct 49869 TGCGGTCGGGGATGCCGGGCACGTTCTGGATGGAACCGCCGTGAGCGATGATGCGGTTCT 49810 Query 244038 GCATGTTATCGTTCCACAGGCCC------AAGCGCTCCAGCGCCTCGACCAGGTGCCTGT 244091 ||| | ||||||||||| ||| | | |||| ||| | |||| | | | Sbjct 49809 TCATCGTGTCGTTCCACAGACCCTGCTCGACGAGCTC--GCGGAGCAACCAAGGG----T 49756 Query 244092 TCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCT 244151 |||||||||| ||||| || | ||||| || ||| ||||| |||| || |||| Sbjct 49755 TCACCACCTGGAACTCACCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGCT 49696 Query 244152 CGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCA 244211 ||| || ||| || ||| || ||||| || || || |||||||| | | || Sbjct 49695 CGAAGCACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGCA 49636 Query 244212 GCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACA 244271 | || ||| | || |||||| | ||| | |||||||| ||||||||| | Sbjct 49635 GAAGCGAGTTGCGCAGACCGTGCTTGGCGATCTTGGCCTTGAGCTCGGCCCAGTCCCAGA 49576 Query 244272 TGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGA 244331 | ||||| || ||| |||||||||||| |||||||| |||| || | Sbjct 49575 GGTCCGAGGGGG---------TGACGCCCCACATGTCGTACTGCAGCTCACCCT-GCGAA 49526 Query 244332 CGGGGCT-GCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCG 244390 |||| ||| |||||||| ||||| |||| |||| ||||||| || | ||| Sbjct 49525 GCGGGCGAGCCGGCGTAGGTCTCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCA-CGATCG 49467 Query 244391 -TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCG-CGGGCCTTGC 244448 ||||| ||||||| |||||||||||||||||| | ||| | | || || |||| | Sbjct 49466 CTCGAGAGCGGCGTGGTAGATGGTCTCGAAGATATGCACGTTGA-GACGACGAGCCTCGG 49408 Query 244449 CGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGC 244508 | |||| | |||||| ||||||||| ||||||| || ||||| || ||||| | Sbjct 49407 GAGACTCAAAGGCGTAGCCCATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATAC 49348 Query 244509 CGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGT 244568 ||||||| | ||| ||| ||||||| || ||| || |||||||| ||||| || Sbjct 49347 CGATGGGACGGTGGCGCATGTTGGATCGACGGGCCTCCTCGACGGGGTAGTAGTTGATGT 49288 Query 244569 CGATCACCTTGTTGAGGTT---GCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAA 244625 |||| | |||||| ||||| || | || | || |||| ||| ||| | | | Sbjct 49287 CGATGATCTTGTTAAGGTTCTTGCAGATGGCCTTGG---CGACCTCGTGCAGACGTTTGA 49231 Query 244626 AGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGC 244685 |||||||| || || ||||| || | || | || | |||||||| Sbjct 49230 AGTCGTAC--GT-------CTTGGCGACGGGG-TCG--ATGAAGGTGGGGAGGGCGATCG 49183 Query 244686 TGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGA 244745 ||||| ||||||||| |||||||| || | | | |||||| || |||||||||||| | Sbjct 49182 AGGCCAAGTTGCAGACAGCCACCTCGTCGGGGGCGCTGTACTCGATAATCTCGGTGCACA 49123 Query 244746 GGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCT 244805 ||| ||||||||||||||| |||| || || ||| |||| ||| ||| |||| Sbjct 49122 AGTTGGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCT 49063 Query 244806 TGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGT 244865 ||||||| |||||||| ||||||||| ||| | |||||| | || |||||| | Sbjct 49062 TGTAGAGGATGAAGGGGTTGCCGGTCTCGGTCTGCGACTCGAGGATGGCGTACCAGAGCT 49003 Query 244866 CCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCT 244925 | |||||||| || | || |||||| ||||||||||| ||| ||| || Sbjct 49002 TCTGGGCCTTGACGGTGCGCTTGGCACGGCCCTCGGCCTCGTAGCGCTCGTAGAGGCGCT 48943 Query 244926 CGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCC 244985 | |||||| ||| || || | |||||||||||| ||||||||||| || Sbjct 48942 CAAACTCGTCGCCGTAGCAGTCAGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGACC 48883 Query 244986 ACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGA 245045 | |||||| | || |||||||| ||||||||| ||||| | |||||| || | ||||| Sbjct 48882 AGTCGCCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGA 48823 Query 245046 GGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGA 245105 | || | || | | ||| ||| ||| |||||| | || || | || ||||||| Sbjct 48822 GCTCTCGGGCACGCACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAGA 48763 Query 245106 CGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCT 245165 |||| |||||| ||||| | ||| | || | ||| ||||| ||||||||||| |||| Sbjct 48762 CGTCCGAGTGCCATGGCTCAACGTAAATGGCAAAGGCACCGGGACGCTTGTTGCCACCCT 48703 Query 245166 GGTCCACCATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTA 245221 |||| | | | || ||| |||||||| ||| || | ||||| || ||||| Sbjct 48702 GGTCGA----CGTAGCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGCACGATACCGTTG 48647 Query 245222 GAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATG 245281 | |||||||| || ||||||| || |||| | || | | |||| | | Sbjct 48646 CTGACACCGTTGGTACCGGCAATGTAGGAACCGGTGCCGCGGATGCAGTGGATGTTGAGG 48587 Query 245282 CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCC 245341 || | || |||||| ||||||||| | ||| || |||||| ||||| ||||| Sbjct 48586 CCGATACCACCGGCGGTCTTGGAGATCATGGCACACGTCTTGAGCGTGTCGTAGATGCCA 48527 Query 245342 TCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTG 245401 || || ||| ||||||| ||| || ||||| || || ||||| || | ||| | Sbjct 48526 TCGATCGAGTCGTCCTTCATGGTGACGAGGAAGCACGACGAGAGCTGAGGGTGCGGGGTA 48467 Query 245402 CACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTAC 245461 | | |||||| || |||||| |||||| |||||||| ||| | || ||| Sbjct 48466 CCTGCGTTGAAGAGGGTGGGGGAGGCGTGTGTAAAGTACTTTTGCGACATGAGGTTGTAG 48407 Query 245462 GTCTGGAGCAGAGC-GTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGT 245520 |||| | | || ||||||| | ||||||||| | |||| | |||||| | Sbjct 48406 GTCT-CAATGGCGCTCTCGATGTCCTGGCCGTGGATACCGACGGCGACACGCATGAGCAT 48348 Query 245521 GTGCTGGGGCGTCTCGATGGGTCCCTCGGGTCCCT--TGAGCATGTAGGAGCGCTCGAGC 245578 ||||||||| ||| || | || | || | ||| | |||||||||||||||| Sbjct 48347 GTGCTGGGGACGCTC--TGCGACCTTGCCGTTGATGCGGAGGAGGTAGGAGCGCTCGAGC 48290 Query 245579 GTCTTGAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAGT 245638 |||||||| || ||| | |||| |||||| | || ||| ||| | |||||| Sbjct 48289 GTCTTGAAGCCGAAGAAGTTGTAGTGGAAGTCGCGCTCGTAGATGATGGCCGAGTCGAGC 48230 Query 245639 CTCTCGGCGTGCTTC-TGACTGACCTCGTAAAACTTTTGCGCTATGAGGGGAGCCCTGA- 245696 || ||||| | |||| ||||| ||| | || || | ||| || ||| Sbjct 48229 TGGTCCTTGTGCTCCATGAC-GACCTTGTAGGTGGCGTCCGAGATCATGGG-GCTGTGAC 48172 Query 245697 GCCCGGTGTCCGGATTGACGTTGAACCAGAGCCTCTTGCAC-ACCTCCGAGAACTTGGGG 245755 | ||| | | || ||||||| |||| || || || |||| || || Sbjct 48171 GGCCGTTCTTGGGGTTGACGTACTCGTAGAG-GTCCTGGACGACCTGGCTAAAGTTCTTC 48113 Query 245756 CTGGTGAGCTTATGCAGGTTGGTGACTGCTATGCGCGCCGCCA--ACTTGCTGTAGTCGG 245813 |||| ||| |||| |||| ||| || || |||||||| | || || |||||| | Sbjct 48112 TTGGTCTCCTTGTGCAAGTTGCTGATGGCGATACGCGCCGCGAGGAC-AGC-GTAGTCTG 48055 Query 245814 GGTGAGTGGTGGTCATGTTGGAGGCCGTGTGGGCCAGC-AGCTCGTCAATCTCG 245866 |||| ||||||||| ||| || ||| || | || |||| || | ||| | |||| Sbjct 48054 GGTGGGTGGTGGTCTTGTAGGCGGCGGTCTCGG-CAGCAAGGTTGTCGAGCTCG 48002 >seq9 Length=823499 Score = 331 bits (366), Expect = 2e-85 Identities = 599/855 (70%), Gaps = 26/855 (3%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||| ||||| || ||| |||||||||||| ||||| ||||| Sbjct 594438 ATCTGGCAAATGTACAAAAAGGCCGAGGCTTCCTTCTGGACCGCCGAAGAGATCGACCTT 594379 Query 42360 GCCAAGGACACGGCCGGCTGGGAGT-CACTGTCT--GAGAACGAAA---AGTTTTTCCTC 42413 ||||||| || |||||| || || || |||||| | ||| || || Sbjct 594378 TCCAAGGATCTCCACGACTGGGACAACAAGCTCAACGACAACGAACGCCACTTTATC-TC 594320 Query 42414 AAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACC 42473 | | | || |||||||||||||| || ||||| || ||||| |||||||| | | Sbjct 594319 GCA--CGTCCTCGCCTTCTTCGCCGCTTCCGACGGTATCGTCAACGAGAACCTCGTCGAG 594262 Query 42474 AGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCC 42533 | |||| |||||||| | ||||| || ||||||||||| |||||||| Sbjct 594261 CGTTTCAGCTCCGAGGTGCAAGCCGCCGAGGCTCGTTGCTTCTACGGTTTCCAGATCATG 594202 Query 42534 ATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCC 42593 || |||||| | ||||| ||| ||| | || || |||| ||||| | || ||| Sbjct 594201 ATGGAGAACATCCACTCGGAGACCTACTCGCTCCTCATCGACACCTACATTCGCGAGCCC 594142 Query 42594 GTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCG 42653 | |||| | || || | ||| | ||||| || ||| | ||||| |||| || Sbjct 594141 GAGCAGCGCGAGCTCCTCTTTGACGCCGTCGAGACCATCCCCGTCGTCAAGCAGAAAGCC 594082 Query 42654 GACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGC 42712 ||||||||||| |||||| || | | | ||| || |||| |||| | || || || Sbjct 594081 GACTGGGCGCTGCGATGGATC-AGCGACAAGCGCGCCACTTTCGCCGAGCGTCTCGTCGC 594023 Query 42713 CTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAA 42772 |||| ||||||| || |||||||||||||| ||| ||||||||||||||||||||||||| Sbjct 594022 CTTTGCCGCCGTTGAAGGCATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGCTCAA 593963 Query 42773 GCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831 | || ||| || |||||||| ||||||||||| ||||| |||||| | ||||| | Sbjct 593962 GAAGCGCGGTCTC-ATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGAAG 593904 Query 42832 GGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCA-CAAGCCCTCG 42890 | ||||| | ||||||||||||||||| ||| |||||||||| | | | || | | Sbjct 593903 GTCTGCACACCGACTTTGCCTGCCTCCTCTTC---AGCCACCTCAAGAAGCGTGCACAC- 593848 Query 42891 AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACG 42950 ||| || | |||||||| | ||||| || |||||| ||||||| | || Sbjct 593847 CCGGACACCGTGCTCAAAATCATCACCCAAGCCGTCGACATCGAGGTGGAGTTCTTGAC- 593789 Query 42951 CAGTCGCTGCCCGTGTC-CCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCA 43009 | | | ||| |||| ||| |||| ||| ||| |||| |||||||||| | Sbjct 593788 TACTGCCATCCCCTGTCGCCTCCTCGGTATGTCGAGCGAGGCCATGCACAAGTACATCAA 593729 Query 43010 GTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCG--CCTCTACAACACGCC 43066 |||||||||||| | | || || | | | || | ||| | |||| | | Sbjct 593728 GTACGTCGCCGATCGCTTGCTCGTTTC-GCTCGG--AAATCCGGTTCACTACGGCGAGAG 593672 Query 43067 GTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAA 43126 ||||| ||||| || ||| |||||||||| ||||| || |||||||||||||||||||| Sbjct 593671 CTGCCCGTTCGATTTCATGCAGAACATCTCATTGGAAGGTAAGACCAACTTTTTCGAGAA 593612 Query 43127 GCGCGTCGCCGACTA 43141 | ||||| || || Sbjct 593611 GAAGGTCGCAGAGTA 593597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338385507440