Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq19 181 1e-40 seq9 104 3e-17 >seq19 Length=568126 Score = 181 bits (200), Expect = 1e-40 Identities = 908/1425 (64%), Gaps = 41/1425 (3%) Strand=Plus/Minus Query 113915 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 113974 |||||||| ||||| || | | ||||| |||| |||||| ||||| |||||||| Sbjct 49744 AACTCACCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCG 49685 Query 113975 TTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 114034 ||| || | ||| || ||| ||||| ||||||||||| || | ||||| ||| Sbjct 49684 TTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGCAGAAGCGAGTTG 49625 Query 114035 CGGAGACC---CTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTT 114091 || ||||| ||| | | || ||||||| || ||||||| || | | Sbjct 49624 CGCAGACCGTGCTTGGCGATCTTGG---CCTTGAGCTCGGCCCAGTCCCAGAGGTCCGAG 49568 Query 114092 G---TCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCA 114148 | | | ||| ||||| || |||| || ||| || || || ||||| || | Sbjct 49567 GGGGTGACGCCC---CACATGTCGTACTGCAGCTCACCCTGCGAAGCGGGCGAGCCGGCG 49511 Query 114149 AATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGA-GCTCGCCTCGAGGGCTGCGTG 114207 | |||||||| | ||| | || |||| ||| | | |||| ||||| || ||||| Sbjct 49510 TAGGTCTCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCACGATCGC-TCGAGAGCGGCGTG 49452 Query 114208 ATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCG-A 114266 || || ||||| || || | | || | |||||| || ||||| ||| | Sbjct 49451 GTAGATGGTCTCGAAGATATGCACGTTGAGACGACGAGCCTCGGGAGACTCAAAGGCGTA 49392 Query 114267 GTCGGCACAAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGT 114325 | | || | || || | || || ||||| |||||||||| || || || || || Sbjct 49391 GCC--CATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATGGGACGGTGG 49334 Query 114326 CTCATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTA 114382 | ||| || || |||| || |||| ||||| || | || | ||||| | | | Sbjct 49333 CGCATGTTGGA---TCGACGGGCCTCCTCGACGGGGTAGTAGTTGATGTCGATGATCTTG 49277 Query 114383 TTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAA--CTGC 114440 || || || ||| || |||| | || || || || || | | || | || Sbjct 49276 TTAAGGTTCTTGCAGATGGCCTTGGCGACCTCGTGCAGACGTTTGAAGTCGTACGTCTTG 49217 Query 114441 GAGTCTCT-TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTC 114499 | | | || ||| | | || |||||||| || |||| || || |||| | Sbjct 49216 GCGACGGGGTCGATGA---AGGTGGGGAGGGCGATCGAGGCCAAGTTGCAGACAGCCACC 49160 Query 114500 TCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCC 114559 || || | ||||||| ||||| || || ||||| || || | ||| |||||||| Sbjct 49159 TCGTCGGGGGCGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGCACTTGATGGTGCCG 49100 Query 114560 AAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCC 114619 | |||||| || || ||| |||| ||||||||||| || ||| | || | || Sbjct 49099 AGGTTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGATGAAGGGGTTGCCG 49040 Query 114620 GTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTT 114678 ||||| || || |||| ||| || || | ||||| | || | | || | || ||| || Sbjct 49039 GTCTCGGTCTGCGACTCGAGGATGGCGTACCAGAGCTTCTGGGCCTTG-ACGGTGCGCTT 48981 Query 114679 GGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTC 114738 ||| || ||||| ||||||| ||||||| |||||||| || || | || Sbjct 48980 GGCACGGCCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCAAACTCGTCGCCGTAGCAGTC 48921 Query 114739 TGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACG 114798 | ||| || || || | ||||| | ||| ||||| | || || ||| || | Sbjct 48920 AGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGTTCTGCTCGACCCT 48861 Query 114799 CTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTC 114858 |||||||||||| || || | |||||| || ||||||| || || || | || || Sbjct 48860 CTTCATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTCGGGCACGCACCTCCTC 48801 Query 114859 ATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAG 114918 | || || || || | || | || || | || |||| |||||| || || | Sbjct 48800 CTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAGACGTCCGAGTGCCATGGCTCAAC 48741 Query 114919 GTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCTGTGGC 114975 ||| | || | | || ||| ||| |||||| || || | || ||| Sbjct 48740 GTAAATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTAGCGGGCGGTGTT 48681 Query 114976 ATTAAATACGCGAAGCATTGGAATGATACCAT--CAGATTGGCCATTTGTCCCCCGAATA 115033 || || ||||| ||||| || | |||||| | | || || || || || ||| Sbjct 48680 GTTGAAGACGCGGAGCATGGGCACGATACCGTTGCTGA--CACCGTTGGTACCGGCAATG 48623 Query 115034 CGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAG 115093 || || | | || ||||||| | || ||||| || || ||| ||| Sbjct 48622 TAGGAACCGGTGCCGCGGATGCAGTGGATGTTGAGGCCGATACCACCGGCGGTCTTGGAG 48563 Query 115094 ATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCG 115153 || || ||| | |||| || ||||||| || ||||||||||| |||| | | | Sbjct 48562 ATCATGGCACACGTCTTGAGCGTGTCGTAGATGCCATCGATCGAGTCGTCCTTCATGGTG 48503 Query 115154 ATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTC 115213 | |||||||| ||| | || || || ||||| |||||||||||||| || | Sbjct 48502 ACGAGGAAGCACGACGAGAGCTGAGGGTGCGGGGTACCTGCGTTGAAGAGGGTGGGGGAG 48443 Query 115214 GCGTGGATGAACATAC-CTTGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTC 115272 ||||| | || ||| ||| ||||| | ||||||||| | | || ||||| Sbjct 48442 GCGTGTGT-AAAGTACTTTTGCGACATGAGGTTGTAGGTCTCAATGGCGCTCTCGATGTC 48384 Query 115273 TTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 115317 | ||||| ||||||| | ||| ||||| | ||||| ||||| Sbjct 48383 CTGGCCGTGGATACCGACGGCGACACGCATGAGCATGTGCTGGGG 48339 >seq9 Length=823499 Score = 104 bits (114), Expect = 3e-17 Identities = 171/244 (70%), Gaps = 2/244 (1%) Strand=Plus/Plus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| ||||| ||||| || |||||||| || || |||||| || || Sbjct 593884 GGCAAAGTCGGTGTGCAGACCTTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGACC 593943 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||||||||| |||||||| | |||||| || | || || || ||||||||||| Sbjct 593944 GGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGAT 594003 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGC-AAAGGAGCGCGACTTTGTGTCAA 126224 || || || || || || | ||||||||| || |||| ||||| ||| | | Sbjct 594004 GCCTTCAACGGCGGCAAAGGCGACGAGACGCTCGGCGAAAGTGGCGCG-CTTGTCGCTGA 594062 Query 126225 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAA 126284 ||| || |||||| | || || | || || |||| ||||| || || |||| Sbjct 594063 TCCATCGCAGCGCCCAGTCGGCTTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTCAA 594122 Query 126285 AGAG 126288 |||| Sbjct 594123 AGAG 594126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353084782520