Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq19 181 1e-40
seq9 104 3e-17
>seq19
Length=568126
Score = 181 bits (200), Expect = 1e-40
Identities = 908/1425 (64%), Gaps = 41/1425 (3%)
Strand=Plus/Minus
Query 113915 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 113974
|||||||| ||||| || | | ||||| |||| |||||| ||||| ||||||||
Sbjct 49744 AACTCACCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCG 49685
Query 113975 TTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 114034
||| || | ||| || ||| ||||| ||||||||||| || | ||||| |||
Sbjct 49684 TTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGCAGAAGCGAGTTG 49625
Query 114035 CGGAGACC---CTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTT 114091
|| ||||| ||| | | || ||||||| || ||||||| || | |
Sbjct 49624 CGCAGACCGTGCTTGGCGATCTTGG---CCTTGAGCTCGGCCCAGTCCCAGAGGTCCGAG 49568
Query 114092 G---TCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCA 114148
| | | ||| ||||| || |||| || ||| || || || ||||| || |
Sbjct 49567 GGGGTGACGCCC---CACATGTCGTACTGCAGCTCACCCTGCGAAGCGGGCGAGCCGGCG 49511
Query 114149 AATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGA-GCTCGCCTCGAGGGCTGCGTG 114207
| |||||||| | ||| | || |||| ||| | | |||| ||||| || |||||
Sbjct 49510 TAGGTCTCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCACGATCGC-TCGAGAGCGGCGTG 49452
Query 114208 ATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCG-A 114266
|| || ||||| || || | | || | |||||| || ||||| ||| |
Sbjct 49451 GTAGATGGTCTCGAAGATATGCACGTTGAGACGACGAGCCTCGGGAGACTCAAAGGCGTA 49392
Query 114267 GTCGGCACAAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGT 114325
| | || | || || | || || ||||| |||||||||| || || || || ||
Sbjct 49391 GCC--CATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATGGGACGGTGG 49334
Query 114326 CTCATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTA 114382
| ||| || || |||| || |||| ||||| || | || | ||||| | | |
Sbjct 49333 CGCATGTTGGA---TCGACGGGCCTCCTCGACGGGGTAGTAGTTGATGTCGATGATCTTG 49277
Query 114383 TTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAA--CTGC 114440
|| || || ||| || |||| | || || || || || | | || | ||
Sbjct 49276 TTAAGGTTCTTGCAGATGGCCTTGGCGACCTCGTGCAGACGTTTGAAGTCGTACGTCTTG 49217
Query 114441 GAGTCTCT-TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTC 114499
| | | || ||| | | || |||||||| || |||| || || |||| |
Sbjct 49216 GCGACGGGGTCGATGA---AGGTGGGGAGGGCGATCGAGGCCAAGTTGCAGACAGCCACC 49160
Query 114500 TCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCC 114559
|| || | ||||||| ||||| || || ||||| || || | ||| ||||||||
Sbjct 49159 TCGTCGGGGGCGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGCACTTGATGGTGCCG 49100
Query 114560 AAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCC 114619
| |||||| || || ||| |||| ||||||||||| || ||| | || | ||
Sbjct 49099 AGGTTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGATGAAGGGGTTGCCG 49040
Query 114620 GTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTT 114678
||||| || || |||| ||| || || | ||||| | || | | || | || ||| ||
Sbjct 49039 GTCTCGGTCTGCGACTCGAGGATGGCGTACCAGAGCTTCTGGGCCTTG-ACGGTGCGCTT 48981
Query 114679 GGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTC 114738
||| || ||||| ||||||| ||||||| |||||||| || || | ||
Sbjct 48980 GGCACGGCCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCAAACTCGTCGCCGTAGCAGTC 48921
Query 114739 TGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACG 114798
| ||| || || || | ||||| | ||| ||||| | || || ||| || |
Sbjct 48920 AGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGTTCTGCTCGACCCT 48861
Query 114799 CTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTC 114858
|||||||||||| || || | |||||| || ||||||| || || || | || ||
Sbjct 48860 CTTCATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTCGGGCACGCACCTCCTC 48801
Query 114859 ATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAG 114918
| || || || || | || | || || | || |||| |||||| || || |
Sbjct 48800 CTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAGACGTCCGAGTGCCATGGCTCAAC 48741
Query 114919 GTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCTGTGGC 114975
||| | || | | || ||| ||| |||||| || || | || |||
Sbjct 48740 GTAAATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTAGCGGGCGGTGTT 48681
Query 114976 ATTAAATACGCGAAGCATTGGAATGATACCAT--CAGATTGGCCATTTGTCCCCCGAATA 115033
|| || ||||| ||||| || | |||||| | | || || || || || |||
Sbjct 48680 GTTGAAGACGCGGAGCATGGGCACGATACCGTTGCTGA--CACCGTTGGTACCGGCAATG 48623
Query 115034 CGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAG 115093
|| || | | || ||||||| | || ||||| || || ||| |||
Sbjct 48622 TAGGAACCGGTGCCGCGGATGCAGTGGATGTTGAGGCCGATACCACCGGCGGTCTTGGAG 48563
Query 115094 ATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCG 115153
|| || ||| | |||| || ||||||| || ||||||||||| |||| | | |
Sbjct 48562 ATCATGGCACACGTCTTGAGCGTGTCGTAGATGCCATCGATCGAGTCGTCCTTCATGGTG 48503
Query 115154 ATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTC 115213
| |||||||| ||| | || || || ||||| |||||||||||||| || |
Sbjct 48502 ACGAGGAAGCACGACGAGAGCTGAGGGTGCGGGGTACCTGCGTTGAAGAGGGTGGGGGAG 48443
Query 115214 GCGTGGATGAACATAC-CTTGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTC 115272
||||| | || ||| ||| ||||| | ||||||||| | | || |||||
Sbjct 48442 GCGTGTGT-AAAGTACTTTTGCGACATGAGGTTGTAGGTCTCAATGGCGCTCTCGATGTC 48384
Query 115273 TTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 115317
| ||||| ||||||| | ||| ||||| | ||||| |||||
Sbjct 48383 CTGGCCGTGGATACCGACGGCGACACGCATGAGCATGTGCTGGGG 48339
>seq9
Length=823499
Score = 104 bits (114), Expect = 3e-17
Identities = 171/244 (70%), Gaps = 2/244 (1%)
Strand=Plus/Plus
Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105
|||||| || ||| ||||| ||||| || |||||||| || || |||||| || ||
Sbjct 593884 GGCAAAGTCGGTGTGCAGACCTTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGACC 593943
Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165
||||||||||| |||||||| | |||||| || | || || || |||||||||||
Sbjct 593944 GGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGAT 594003
Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGC-AAAGGAGCGCGACTTTGTGTCAA 126224
|| || || || || || | ||||||||| || |||| ||||| ||| | |
Sbjct 594004 GCCTTCAACGGCGGCAAAGGCGACGAGACGCTCGGCGAAAGTGGCGCG-CTTGTCGCTGA 594062
Query 126225 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAA 126284
||| || |||||| | || || | || || |||| ||||| || || ||||
Sbjct 594063 TCCATCGCAGCGCCCAGTCGGCTTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTCAA 594122
Query 126285 AGAG 126288
||||
Sbjct 594123 AGAG 594126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597353084782520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |