Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq11 140 4e-28
seq18 109 6e-19
>seq11
Length=758843
Score = 140 bits (154), Expect = 4e-28
Identities = 155/204 (76%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 42006 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 42065
||||| ||||||||||| ||||| ||||| || | ||||| || | || || ||||||
Sbjct 158038 TGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCATCCTCCAGCTGC 158097
Query 42066 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTT 42125
|||||||| || || | ||||||||||||| || | | |||||||||| ||| ||
Sbjct 158098 TTACCAGCAAAGATCAAGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTG 158157
Query 42126 TGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 42184
|||| ||| | | | || || || || ||||||| ||| ||||| ||||||||
Sbjct 158158 GCCTTGA-CGTTGTCAATAGTATCCGAGGACTCGACATCGAGCGTAATGGTCTTGCCCGT 158216
Query 42185 TAGCGTCTTTACAAAGATTTGCAT 42208
|||||||| ||||||||||||||
Sbjct 158217 GAGCGTCTTGACAAAGATTTGCAT 158240
Score = 127 bits (140), Expect = 2e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 42006 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 42065
||||| ||||||||||| ||||| ||||| || | ||||| || |||| || ||||||
Sbjct 158266 TGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCGAGCTGC 158325
Query 42066 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTT 42125
||||||||||| ||||||||||||||||| | || | | |||||||||| ||| ||
Sbjct 158326 TTACCAGCGAAAATGAGTCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGGATCTTG 158385
Query 42126 TGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTT 42185
||| | | | | |||||| || || || || | ||||| || || || ||
Sbjct 158386 GCTTTCACATTGTCGATCGTGTCCGAAGACTCGACCTCCAGTGTGATCGTCTTTCCTGTG 158445
Query 42186 AGCGTCTTTACAAAGATTTGCAT 42208
|||||||| || || || |||||
Sbjct 158446 AGCGTCTTGACGAAAATCTGCAT 158468
>seq18
Length=577775
Score = 109 bits (120), Expect = 6e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058
|||||| || | || |||||| || || ||||| || | || || | |||| ||
Sbjct 283460 CACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGTGGCCGTCCTC 283519
Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118
||||||||||||||||| || || ||||||||||||| || | || ||||||||||
Sbjct 283520 AAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTG 283579
Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178
||| || |||| | | | ||||| || || || |||| |||||||| ||
Sbjct 283580 GATCTTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCGACCTCGAGAGTGATGGTCTT 283639
Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211
||||| || ||||| || ||||| ||||| ||
Sbjct 283640 ACCCGTGAGGGTCTTAACGAAGATCTGCATCTT 283672
Score = 105 bits (116), Expect = 7e-18
Identities = 140/192 (73%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||| || || ||||| || | ||||| || |||| || |||||||| || || ||
Sbjct 203647 TCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCGAGCTGCTTTCCTGCAAAG 203706
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137
|| ||||||||||| |||| ||| | || |||||||| ||| || |||| |||
Sbjct 203707 ATAAGTCGCTGCTGATCGGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGTT 203765
Query 42138 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | | ||||| || || || |||| |||||||| ||||| || || ||||| ||
Sbjct 203766 GTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTAAC 203825
Query 42197 AAAGATTTGCAT 42208
|||||| |||||
Sbjct 203826 AAAGATCTGCAT 203837
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543212331478960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |