Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq18 127 2e-24
seq11 104 2e-17
>seq18
Length=577775
Score = 127 bits (140), Expect = 2e-24
Identities = 147/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 64246 CGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCC 64305
|||||| || || || || ||||| || | | ||| || |||||||||||||||||||
Sbjct 203412 CGTCGACTCCTTCTGGATATTGTAGTCGGAAAGGGTACGGCCGTCTTCAAGCTGCTTGCC 203471
Query 64306 GGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTT 64365
|||| |||| ||||||||||| ||||| || || ||||| || ||||| || || |||
Sbjct 203472 GGCAAAAATAAGCCGCTGCTGATCGGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTT 203531
Query 64366 TACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425
|| || | || ||| || || || || | ||| | |||||||||||||| |||
Sbjct 203532 GACGTTGTCGATGGTGTCAGAGGACTCGACCTCGAGAGTGATGGTCTTGCCGGTCAGAGT 203591
Query 64426 TTTTACGAAAATTTGCAT 64443
|| || || || |||||
Sbjct 203592 CTTGACAAAGATCTGCAT 203609
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||| | | || || || || | |||||||| || || |||||||| || |
Sbjct 203610 ACCCCCGCGAAGACGGAGGACGAGGTGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGA 203669
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||||| |||| || |||||||| || ||| | || || |||||||| ||||| ||
Sbjct 203670 AAGAGTGCGGCCGTCCTCGAGCTGCTTTCCTGCAAAGATAAGTCGCTGCTGATCGGGTGG 203729
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| ||||| || ||||| || || ||| || || | || ||| || || ||
Sbjct 203730 GATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGAC 203789
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | |||||||||||| | ||| || || || || |||||
Sbjct 203790 CTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTAACAAAGATCTGCAT 203837
Score = 84.2 bits (92), Expect = 2e-11
Identities = 159/234 (68%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | ||||| | || | ||||| || || || |||||||| || |
Sbjct 283442 ACCACCACGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 283501
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| |||| | |||| ||||||||||| || || | || || |||||||||||||| ||
Sbjct 283502 AAGGGTGTGGCCGTCCTCAAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCGGGGGG 283561
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| || || || || || || || ||| ||| || | || || | || ||
Sbjct 283562 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCGAC 283621
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTAAT 64449
|| | ||| | |||||| || || | || || ||||| || ||||| || ||
Sbjct 283622 CTCGAGAGTGATGGTCTTACCCGTGAGGGTCTTAACGAAGATCTGCATCTTGAT 283675
>seq11
Length=758843
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| || || || ||||||||||| | | |||||| |||| |||||||||||||||
Sbjct 158500 GTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCG 158559
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | ||||| |||||||| || || || || || || || ||||| || || |||
Sbjct 158560 GCAAAGATGAGACGCTGCTGATCAGGTGGGATACCCTCCTTGTCTTGAATCTTGGCCTTG 158619
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| || | || || | ||||| || | || | ||||| ||||||| |||
Sbjct 158620 ACGTTGTCGATAGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTACCGGTCAGAGTC 158679
Query 64427 TTTACGAAAATTTGCAT 64443
|| || || || |||||
Sbjct 158680 TTGACAAAGATCTGCAT 158696
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| |||||||||| ||| || || || | ||| || || ||||||||||| || |
Sbjct 158241 ACCTCCGCGCAATCGAAGGACAAGGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGGA 158300
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| || || |||| || |||||||| || || ||||||| ||||||||||| || ||
Sbjct 158301 GAGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCAGGCGG 158360
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394
|| || || || || || | | || ||||| ||| || | || || | || |
Sbjct 158361 GATACCCTCCTTGTCCTGGA-TCTTGGCTTTCACATTGTCGATCGTGTCCGAAGACTCGA 158419
Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
| || | || | ||||| || || | || || |||||||| |||||
Sbjct 158420 CCTCCAGTGTGATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 158468
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499644369056360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |