Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq19 423 2e-113 >seq19 Length=568126 Score = 423 bits (468), Expect = 2e-113 Identities = 1141/1722 (66%), Gaps = 54/1722 (3%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | | ||| | |||||| || || ||| || ||||||||| || | |||| | Sbjct 48267 TACAACTTCTTCGGCTTCAAGACGCTCGAGCGCTCCTACCTCCTCCGCATCAACGGCAAG 48326 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || | ||||| || || || |||| ||||| |||||| |||| || |||||||| ||| Sbjct 48327 GTCGCAGAGCGTCCCCAGCACATGCTCATGCGTGTCGCCGTCGGTATCCACGGCCAGGAC 48386 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACC 93897 || || | | | | | || |||| | | ||| | ||| ||| || Sbjct 48387 ATCGAGAGCGCCATTGAGACCTACAACCTCATGTCGCAAAAGTACTTTACACACGCCTCC 48446 Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957 || ||||| |||||||| || |||||| || ||| | || ||||| ||||| | || Sbjct 48447 CCCACCCTCTTCAACGCAGGTACCCCGCACCCTCAGCTCTCGTCGTGCTTCCTCGTCACC 48506 Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017 | |||| |||||| ||| || || | ||||| |||||| ||||| | ||||| Sbjct 48507 ATGAAGGACGACTCGATCGATGGCATCTACGACACGCTCAAGACGTGTGCCATGATCTCC 48566 Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077 || ||| || || ||||| ||| ||||| | | || | || ||||||||||| Sbjct 48567 AAGACCGCCGGTGGTATCGGCCTCAACATCCACTGCATCCGCGGCACCGGTTCCTACATT 48626 Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137 ||||||||| || | |||||| |||| || |||||||| |||||||||||| | Sbjct 48627 GCCGGTACCAACGGTGTCAGCAACGGTATCGTGCCCATGCTCCGCGTCTTCAACAACACC 48686 Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197 || |||||||| ||||||||||| | | | ||| | || || | || | ||| Sbjct 48687 GCCCGCTACGTCGACCAGGGTGGCAACAAGCGTCCCGGTGCCTTTGCCATTTACGTTGAG 48746 Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257 || |||||| ||||||| | ||| ||||||| || |||||||||||||| || | Sbjct 48747 CCATGGCACTCGGACGTCTTTGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAG 48806 Query 94258 GAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTC 94317 | | | ||| |||| ||||||||||| ||||||||||| || || || ||||| | ||| Sbjct 48807 GTGCGTGCCCGAGAGCTCTTCTACGCACTCTGGGTGCCCGATCTCTTCATGAAGAGGGTC 48866 Query 94318 GAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC-GT 94376 ||| | ||| || |||| || | || ||||| || || ||||| || | ||| | Sbjct 48867 GAGCAGAACGGCGACTGGTCGCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCTGACTGC 48926 Query 94377 TTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCA---G 94433 | | || | ||||| | | || | || ||||| | ||||| |||| | Sbjct 48927 TACGGCGACGAG-TTTGAGCGCCTCTACGAGCGCTACGAGGCCGAGGGCCGTGCCAAGCG 48985 Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493 | || | | || |||||| ||| | ||| | || ||| ||||| || Sbjct 48986 CACCGTCA---AGGCCCAGAAGCTCTGGTACGCCATCCTCGAGTCGCAGACCGAGACCGG 49042 Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553 | |||| |||| | | |||||| | | ||| |||| ||||||| || ||||||| Sbjct 49043 CAACCCCTTCATCCTCTACAAGGATGCCGCTAACCGCAAGAGCAACCAGAAGAACCTCGG 49102 Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613 |||||| |||| || |||||||||||||| ||||||| | | || |||||| | Sbjct 49103 CACCATCAAGTGCTCCAACTTGTGCACCGAGATTATCGAGTACAGCGCCCCCGACGAGGT 49162 Query 94614 TGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGA----GATGCCTACA 94669 ||||| || ||| ||| ||| ||| ||| |||| ||| | ||| | ||| | | Sbjct 49163 GGCTGTCTGCAACTTGGCCTCGATCGCCCTCCCCACCTTCAT-CGACCCCGTCGCCAAGA 49221 Query 94670 CGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGG--ATGGTCTT 94727 || ||| |||| || |||| | ||| | || |||| || | Sbjct 49222 CG--TACGACTTCAAACG-TCTGCACGAGGT-----------CGCCAAGGCCATCTGCAA 49267 Query 94728 GAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGG--CGGAGAACTCA 94785 |||||| |||| | | ||||||| |||| |||||||||| ||||| || || || Sbjct 49268 GAACCTTAACAAGATCATCGACATCAACTACTACCCCGTCGAGGAGGCCCGTCGA--TCC 49325 Query 94786 AACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATG 94845 ||| || || || |||||||| ||||| ||||||||| | || ||||| | |||| Sbjct 49326 AACATGCGCCACCGTCCCATCGGTATCGGTGTCCAGGGTCTTGCCGACGCCTTCATGATC 49385 Query 94846 ATGCGTCTGC-CCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAG 94904 ||| | || | ||| || ||| ||| || || | || || | || ||||| | Sbjct 49386 ATG-GGCTACGCCTTTGAGTCTCCCGAGGCTCGTCGTCTCAACGTGCATATCTTCGAGAC 49444 Query 94905 CATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGC-CAGATCGGACGGCGGGCCAC 94963 ||| || ||| || | | | ||| | | |||| ||| | ||||| | Sbjct 49445 CATCTACCACGCCGCTCTCGAGCGATCGTGCGAGCTGGCTCAG-CAGCACGGC---ACCT 49500 Query 94964 ACGAATCGTTCCGCGGATCGCC--CTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGG 95021 |||| | | | ||| ||||| ||| | ||||| | |||| |||| | ||||| Sbjct 49501 ACGAGACCTACGCCGGCTCGCCCGCTTCG--CAGGGTGAGCTGCAGTACGACATGTGGGG 49558 Query 95022 TGTGAAGCCCTCGGGTCTGTACGACTGGG--AAGCTCTACGCGCTGATGTTATCAAACAC 95079 || | ||||||| || | ||||||| ||||| | || || | ||| ||| Sbjct 49559 CGTCACCCCCTCGGACCTCTGGGACTGGGCCGAGCTCAAGGCCAAGA--TCGCCAAGCAC 49616 Query 95080 GGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTT 95139 ||| || ||| |||| || | || ||||||||||| ||||| || |||||||| Sbjct 49617 GGTCTGCGCAACTCGCTTCTGCTCGCTCCCATGCCCACCGCCTCGACCAGTCAGATCCTC 49676 Query 95140 GGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCC 95199 ||| |||||||| ||||| || | ||| |||||| | ||| | || ||||||||| Sbjct 49677 GGCTTCAACGAGTGCTTCGAGCCTTACACGTCCAACATCTACTCGCGTCGTGTGCTCGCC 49736 Query 95200 GGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTC--TCTGGGTGTGT 95257 || || |||| || | ||| | || || || || |||| | |||| ||| Sbjct 49737 GGTGAGTTCCAGGTGGTGAACCCTTGGTTGCTCCGCGAGCT--CGTCGAGCAGGGTCTGT 49794 Query 95258 GGGGTGACAAGGTCAAGAACCAACTGCTACGCGC-CAACGGCTCCGTCCAGAACATCCCG 95316 || |||| | | ||||||| | | ||| | | ||| ||| |||||||| | || Sbjct 49795 GGAACGACACGATGAAGAACC-GCATCATCGCTCACGGCGGTTCCATCCAGAACGTGCCC 49853 Query 95317 CAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTG 95376 || || || ||||||| ||||||||||||||| ||||||||| ||| | Sbjct 49854 GGCATCCCCGACCGCATCAAGAAGCTCTACAAGACCGTCTGGGAGATCAGCCAGAAGGCC 49913 Query 95377 ATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAG 95418 || ||||| || |||| ||| || | |||||||||||| Sbjct 49914 ATCATCGACATGGCCGCCGACCGTGGTGCTTTCATCTGCCAG 49955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722773301240