Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq19 297 2e-75 seq11 116 4e-21 seq9 114 1e-20 seq18 93.3 4e-14 >seq19 Length=568126 Score = 297 bits (328), Expect = 2e-75 Identities = 1082/1650 (66%), Gaps = 59/1650 (4%) Strand=Plus/Minus Query 152838 ATGAAAGCGTTACGGTCGGCCGCCATCTCAATCATG-CGTTTTGCCTTCATCTCCCAGGC 152896 |||||||| ||||||||| ||||| || || ||| | || || || ||||||||| | Sbjct 49948 ATGAAAGCACCACGGTCGGCGGCCATGTCGATGATGGCCTTCTGGCTG-ATCTCCCAGAC 49890 Query 152897 GGTTTTGTACAAATTTTTAACGCTATCCGGTATACCTTCAATGTTCTGAATAGAGCCCTT 152956 ||| ||||| | || || | || || || || || | |||||| || || || Sbjct 49889 GGTCTTGTAGAGCTTCTTGATGCGGTCGGGGATGCCGGGCACGTTCTGGATGGAACCGCC 49830 Query 152957 GTGTGCAAAAATAGCGTTTCGTATTTCGGGCGTGT-ACACGTTCAGTTTAATGAGGTCAT 153015 ||| || | || ||| ||| | | | ||| ||| | | | | ||| || Sbjct 49829 GTGAGCGATGAT-GCGGTTCTTCATCGTGTCGTTCCACAGACCCTGCTCGACGAGCTCGC 49771 Query 153016 CGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACAT 153075 || ||| | |||| ||||| || ||||| || || | ||| || | | | || | | Sbjct 49770 GGAGCAACCAAGGGTTCACCACCTGGAACTCACCGGCGAGCACACGACGCGAGTAGATGT 49711 Query 153076 TGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCG 153135 || ||| |||| || ||| | ||||| ||| || || ||| || | ||||| | Sbjct 49710 TGGACGTGTAAGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGG 49651 Query 153136 GCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACG 153195 ||||| || | || | || || |||| |||||| || | | |||| | | Sbjct 49650 GCATGGGAGCGAGCAGAAGCGAGTTGCGCAGACCGTGCTTGGCGATCTTGGCCTTGAGCT 49591 Query 153196 CCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTC 153255 | ||| ||||| || |||| || || || ||||||||||||||| | | | || Sbjct 49590 CGGCCCAGTCCCAGAGGTCCGAGGGGGTGACGCCCCACATGTCGTACTGCAGCTCACCCT 49531 Query 153256 GACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGC 153315 | ||||| |||||| | || |||| |||||| | || ||||| ||||| | Sbjct 49530 GCGAAGCGGGCGAGCCGGCGTAGGTCTCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCA-C 49472 Query 153316 TAGC-CTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCC-GC 153373 | | |||||| ||| | | ||| ||||| ||| ||| || |||||| || | || Sbjct 49471 GATCGCTCGAGAGCGGCGTGGTAGATGGTCTCGAAGATATGCACGTTGAGA-CGACGAGC 49413 Query 153374 TTCTTCGCTCTCGTACGGCAT-GCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATAC 153432 || ||| | ||| | || || | || ||||||||||| |||||||||| || Sbjct 49412 CTCGGGAGACTCAAA-GGCGTAGCCCATGATCATGAAGGCGTCGGCAAGACCCTGGACAC 49354 Query 153433 CGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGAT 153492 ||| |||||||| || || | |||| || | || | | | ||| |||| | Sbjct 49353 CGATACCGATGGGACGGTGGCGCATGTTGGATCGACGGGCCTCCTCGACGGGGTAGTAGT 49294 Query 153493 TGCGATCGATAATTTTGTTGAGGTTGC-GCACCACCACTTTAGTTATCGCCTTAAGTTTC 153551 || ||||| || ||||| ||||| ||| | | || | | | | | || Sbjct 49293 TGATGTCGATGATCTTGTTAAGGTTCTTGCAG-ATGGCCTTGGCGACCTCGTGCAGACGT 49235 Query 153552 TCGAAATCATAGGTCATTTCGTCGACGCGTACGCATCGATTC----ACGGCAATAGACGC 153607 | ||| || || ||| | | ||||| | || || | | ||| || || || Sbjct 49234 TTGAAGTCGTACGTCTT---GGCGACGGGGTCG-ATGAAGGTGGGGAGGGCGATCGAGGC 49179 Query 153608 CAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTT 153667 || || ||||| ||| ||| |||| | ||||||||| | ||||||| ||| | ||| Sbjct 49178 CAAGTTGCAGACAGCCACCTCGTCGGGGGCGCTGTACTCGATAATCTCGGTGCACAAGTT 49119 Query 153668 GCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAA 153727 | ||| || ||| ||| | || | ||| ||||| ||||| || || || ||| | Sbjct 49118 GGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTTGTA 49059 Query 153728 GAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTATGC-AGGTCCT 153786 ||| ||| | || |||||||||| |||| |||| ||| | || || | || Sbjct 49058 GAGGATGAAGGGGTTGCCGGTCTCGGTCTGCGACTCGAGGATGG-CGTACCAGAGCTTCT 49000 Query 153787 GCGCTCGCACCCGCTGCCGATAGC--GGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTC 153844 | || || | ||| | || |||||||| |||||| |||||||| || ||||| Sbjct 48999 GGGCCTTGAC--GGTGCGCTTGGCACGGCCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTC 48942 Query 153845 AAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCA 153904 ||||||||||||||||||||| ||||||||||| |||| | || ||||| |||||||| Sbjct 48941 AAACTCGTCGCCGTAGCAGTCAGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGACCA 48882 Query 153905 CATATCGT-CGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGA 153963 ||| | || | ||| | |||||| ||||| ||||||||||| ||||| | || Sbjct 48881 GTCGCCGTTCTGC-TCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGA 48823 Query 153964 GGTCGCGCGCCTTGCAA-TCCTCCGCGCCCATGTTGCGTTTCAGA--TTGAGCACGCTAT 154020 | || || || ||| |||||| ||| ||| || | || | ||| | | Sbjct 48822 GCTCTCGGGCAC-GCACCTCCTCCTTGCCGTGGTTC--TTGCGGAGGTCGAGGAACTCAA 48766 Query 154021 AGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGCTTT---CCGC 154077 ||| ||| | |||||| || |||| ||| | ||| | |||||| |||||| || | Sbjct 48765 AGACGTCCGAGTGCCATGGCTCAACGTAAATGGCAAAGGCACCGGGACGCTTGTTGCCAC 48706 Query 154078 CCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTG 154137 |||| ||||||| ||| | | |||||||||||||| | |||||| | | ||| ||| Sbjct 48705 CCTGGTCGACGTAGCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGCACGATACCG-TTG 48647 Query 154138 C-GGTGCCGTTGGT--CG--AAT---TGATCTTGCTGCCGCGGGCGCGCACTTGATGCAC 154189 | | |||||||| || ||| || | | |||||||| ||| | ||| Sbjct 48646 CTGACACCGTTGGTACCGGCAATGTAGGAAC-CGGTGCCGCGG--ATGCAGTGGAT---- 48594 Query 154190 GTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCGCC--CAGCGTCCTG 154247 ||| | ||| || || ||| || ||| || || || ||| || | ||||| | Sbjct 48593 GTTGAGGCCGATACCACCGGCGGTCTTGGAGAT--CATGGCACACGTCTTGAGCGTGTCG 48536 Query 154248 TAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGA 154307 |||||||| ||||| ||||| | | || | ||| ||||| | | || || Sbjct 48535 TAGATGCCATCGATCGAGTCGTCCTTCATGGTGACGAGGAAGCACGACGAGAGCTGAGG- 48477 Query 154308 ATGC-GCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCAT 154366 ||| | || || || ||||||||||| ||||| ||||| ||||| ||| Sbjct 48476 GTGCGGGGTACCTGCGTTGAAGAGGGTGGGGGAGGCGTGTGTAAAGTACTTTTGCGACAT 48417 Query 154367 CATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCG 154426 | | ||| || || |||||| ||||| || | |||||| || |||| ||||| || Sbjct 48416 GAGGTTGTAGGTCTCAATGGCGCTCTCGATGTCCTGGCCGTGGATACCGACGGCGACACG 48357 Query 154427 CATGAGCATGTGCTGCGGACGTTCGGCGAC 154456 ||||||||||||||| ||||| || ||||| Sbjct 48356 CATGAGCATGTGCTGGGGACGCTCTGCGAC 48327 >seq11 Length=758843 Score = 116 bits (128), Expect = 4e-21 Identities = 146/197 (74%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||| ||| | || || |||||| || || || |||| | Sbjct 158503 GACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCA 158562 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| |||||||| || || || || ||||| || ||||| ||| | || | || | Sbjct 158563 AAGATGAGACGCTGCTGATCAGGTGGGATACCCTCCTTGTCT-TGAATCTTGGCCTTGAC 158621 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| | | ||||||| ||||||||||||| || | ||| ||||| |||||||| | Sbjct 158622 GTTGT-CGATAGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTACCGGTCAGAGTCT 158680 Query 138599 TTACAAAAATCTGCATG 138615 | ||||| ||||||||| Sbjct 158681 TGACAAAGATCTGCATG 158697 Score = 102 bits (112), Expect = 8e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| ||||||||||||||| | |||||| ||||||||| || ||||| | | Sbjct 158277 CTCCTTCTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAA 158336 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 || || ||||| ||||| || || ||||| || ||||| ||| || ||| | ||| Sbjct 158337 AATGAGTCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGGATCTTGGCTTTCACATT 158396 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 | || | ||||| | ||||| ||||| | || | ||| || || || || || || | Sbjct 158397 G-TCGATCGTGTCCGAAGACTCGACCTCCAGTGTGATCGTCTTTCCTGTGAGCGTCTTGA 158455 Query 138602 CAAAAATCTGCAT 138614 | ||||||||||| Sbjct 158456 CGAAAATCTGCAT 158468 >seq9 Length=823499 Score = 114 bits (126), Expect = 1e-20 Identities = 320/483 (66%), Gaps = 21/483 (4%) Strand=Plus/Minus Query 52365 TGGATCGAGAGCGACAC---CGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTC 52421 |||||| ||||||| |||||| | |||||||| | || ||||| ||| || Sbjct 594066 TGGATC---AGCGACAAGCGCGCCACTTTCGCCGAGCGTCTCGTCGCCTTTGCCGCCGTT 594010 Query 52422 GAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATA 52481 || ||| | || || |||||| ||| ||| ||||||| | | || | | || | Sbjct 594009 GAAGGCATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTC 593950 Query 52482 ATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGAC 52541 |||||||| || || ||| ||||||| | || |||||||||||||| |||||||| ||| Sbjct 593949 ATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGAAGGTCTGCACACCGAC 593890 Query 52542 TTTGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTG----GATTCGGACACGAT 52597 ||||| |||||| || | || | | | || || | | ||||||| | Sbjct 593889 TTTGCCTGCCTCCTCTTC-AGCCAC------CTCAAGAAGCGTGCACACCCGGACACCGT 593837 Query 52598 CCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCT-GC 52656 || | || ||| | || || | ||||| |||||| || || | || | | Sbjct 593836 GCTCAAAATCATCACCCAAGCCGTCGACATCGAGGTGGAGTTCTTGACTACTGCCATCCC 593777 Query 52657 CGGTCGAGCTGCTGGGCATGAACGCGC-AGTCCATGTGCGAGTACATCGAGTTTGTGGCG 52715 | |||| || || || ||| || || || ||||| | |||||||| ||| || || Sbjct 593776 CTGTCG-CCTCCTCGGTATG-TCGAGCGAGGCCATGCACAAGTACATCAAGTACGTCGCC 593719 Query 52716 GATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAG 52775 ||||| || | || |||||| | || ||| | || || ||||| || Sbjct 593718 GATCGCTTGCTCGTTTCGCTCGGAAATCCGGTTCACTACGGCGAGAGCTGCCCGTTCGAT 593659 Query 52776 TTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAG 52835 || ||| | ||||| || | || || ||||||||||||||||||||| |||| ||| Sbjct 593658 TTCATGCAGAACATCTCATTGGAAGGTAAGACCAACTTTTTCGAGAAGAAGGTCGCAGAG 593599 Query 52836 TAT 52838 ||| Sbjct 593598 TAT 593596 >seq18 Length=577775 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| || |||||||||||| | ||| || ||||||||| || || || | | Sbjct 203644 GATTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCGAGCTGCTTTCCTGCA 203703 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| || || || || || ||||| ||||| ||| || || | Sbjct 203704 AAGATAAGTCGCTGCTGATCGGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACG 203763 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||||| ||||||| || | || || || || ||||| || Sbjct 203764 TTGTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTA 203823 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 203824 ACAAAGATCTGCAT 203837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261971973680