Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq19 163 5e-35
>seq19
Length=568126
Score = 163 bits (180), Expect = 5e-35
Identities = 377/562 (67%), Gaps = 16/562 (3%)
Strand=Plus/Minus
Query 203849 GTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTTTAGG 203908
||||||||||||||||| ||||||| || | | ||| ||||| | |||||||| ||
Sbjct 50095 GTGAACTGAATGGCGTTGGAGGCAGGCTTGGTACGCAGGTAGTAGGTACCGGTCTTGAGA 50036
Query 203909 CCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATG 203968
||||||| ||| ||||| | |||||| || | || | || | | | || | | | |
Sbjct 50035 CCCTTCTTCCAGCCGTAGAAGTGCATCGAGGTGAGCTGGCCAAAGGTAGGCGCCGAGAGG 49976
Query 203969 TGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATA 204028
|||||||| || ||||| ||| |||||||| | || || |||||||| | |||
Sbjct 49975 TGAATGTTGAGCGACTGCGACTGGCAGATGAAAGCACCACGGTCGGCGGCCATGTCGATG 49916
Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGTGTGTTGAGGCAC 204087
|||| |||||| |||||||| || |||||| | | | ||| || || | | || |
Sbjct 49915 ATGGCCTTCTGGCTGATCTCCCAGACGGTCTTGTAGAGCTTCT-TGATGCGGTCGGGGA- 49858
Query 204088 ATCTTCC---CACGTCCT-GATCGAGCCGTTGTCGGCCATCA---GTCTCATCCTCGTCT 204140
| || ||||| || ||| || ||| || || || | | || || |||| |
Sbjct 49857 ---TGCCGGGCACGTTCTGGATGGAACCGCCGTGAGCGATGATGCGGTTCTTCATCGTGT 49801
Query 204141 CCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAA 204200
| | ||||| ||| | || ||||| || | || ||||| | | ||| |
Sbjct 49800 CGT---TCCACAGACCCTGCTCGACGAGCTCGCGGAGCAACCAAGGGTTCACCACCTGGA 49744
Query 204201 AGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGT 204260
| || |||| ||||| | || | | | | |||| ||| | || ||||| |||||
Sbjct 49743 ACTCACCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCGT 49684
Query 204261 TGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGC 204320
|| ||||| |||||| ||| ||| |||||||||||||| || || || |||||||
Sbjct 49683 TGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGCAGAAGCGAGTTGC 49624
Query 204321 GCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACTGGGTT 204380
||| ||||| || || | || ||| || || |||||| | | |||
Sbjct 49623 GCAGACCGTGCTTGGCGATCTTGGCCTTGAGCTCGGCCCAGTCCCAGAGGTCCGAGGGGG 49564
Query 204381 TCACGCCCCACATGTCGAACTG 204402
| ||||||||||||||| ||||
Sbjct 49563 TGACGCCCCACATGTCGTACTG 49542
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795154514178640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |