Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq11 150 2e-31
seq18 129 7e-25
seq1 111 2e-19
>seq11
Length=758843
Score = 150 bits (166), Expect = 2e-31
Identities = 161/210 (77%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|| || ||||| || |||||||| || || |||||||| || |||||||| | || ||
Sbjct 158032 ACGAGGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCATCCTCC 158091
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|||||||| || || || ||||||||||||||||||| || | | |||||||||| |
Sbjct 158092 AGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGG 158151
Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
||||| ||||| ||| | | | || || || || ||||| | ||| ||||| ||
Sbjct 158152 ATCTTGGCCTTGA-CGTTGTCAATAGTATCCGAGGACTCGACATCGAGCGTAATGGTCTT 158210
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||||| ||||| || ||||||||||||||
Sbjct 158211 GCCCGTGAGCGTCTTGACAAAGATTTGCAT 158240
Score = 123 bits (136), Expect = 3e-23
Identities = 166/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
||||| | || || | || || ||||| || |||||||| || || |||||||||||
Sbjct 158242 CCTCCGCGCAATCGAAGGACAAGGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGGAG 158301
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
||||| || |||| ||||||||||| || ||||| || | ||||||||||| | |||
Sbjct 158302 AGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCAGGCGGG 158361
Query 46487 ACGCTCTCCTTGTCCATGATCTT--CTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544
| | |||||||||| |||||| ||| | |||| | |||||| || || |
Sbjct 158362 ATACCCTCCTTGTCCTGGATCTTGGCTTTCACATTGTCG--ATCGTGTCCGAAGACTCGA 158419
Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| |||| ||||| || || || || ||||| || || || || |||||
Sbjct 158420 CCTCCAGTGTGATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 158468
Score = 111 bits (122), Expect = 2e-19
Identities = 142/193 (74%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||| ||||| || ||||| |||| || |||||||||||||| ||
Sbjct 158505 CTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAA 158564
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | |||||||| || | || | | ||||||||| ||||| ||||| |||
Sbjct 158565 GATGAGACGCTGCTGATCAGGTGGGATACCCTCCTTGTCTTGAATCTTGGCCTTGA-CGT 158623
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | |||||| || ||||| || | ||||| || || || ||||| || || |
Sbjct 158624 TGTCGATAGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTACCGGTCAGAGTCTTGA 158683
Query 46581 CAAAGATTTGCAT 46593
||||||| |||||
Sbjct 158684 CAAAGATCTGCAT 158696
>seq18
Length=577775
Score = 129 bits (142), Expect = 7e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
||||| | | |||||| |||| || | || |||||| |||||||||||||||||
Sbjct 203383 CCTCCACGGAGACGCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGAA 203442
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| || || |||| || |||||||||||||| || || | |||||||| |||| ||
Sbjct 203443 AGGGTACGGCCGTCTTCAAGCTGCTTGCCGGCAAAAATAAGCCGCTGCTGATCGGGTGGG 203502
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545
| || |||||||| |||||| ||||| ||| | | | ||||| || || ||
Sbjct 203503 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCAGAGGACTCGAC 203561
Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| | |||||||| ||||| ||||| || || |||||||| |||||
Sbjct 203562 CTCGAGAGTGATGGTCTTGCCGGTCAGAGTCTTGACAAAGATCTGCAT 203609
Score = 129 bits (142), Expect = 7e-25
Identities = 146/196 (74%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| |||||||| || || ||| | |||| || |||||||| || |||||
Sbjct 283478 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGTGGCCGTCCTCAAGCTGCTTACCAGCGAA 283537
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| |||||||||||||| || | || |||||||||| |||||| ||||| |
Sbjct 283538 GATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 283597
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | ||||| || || || || | |||||||| || ||||| || || |||||
Sbjct 283598 GTCGATGGTGTCCGAAGACTCGACCTCGAGAGTGATGGTCTTACCCGTGAGGGTCTTAAC 283657
Query 46582 AAAGATTTGCATTTTG 46597
||||| ||||| |||
Sbjct 283658 GAAGATCTGCATCTTG 283673
Score = 123 bits (136), Expect = 3e-23
Identities = 144/192 (75%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| ||||| ||||||||||| |||||||| |||| ||||||||||| || || ||
Sbjct 203647 TCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCGAGCTGCTTTCCTGCAAAG 203706
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|| | |||||||| |||| || | || |||||||| |||||| ||||| |||
Sbjct 203707 ATAAGTCGCTGCTGATCGGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGTT 203765
Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | | ||||| || || || || | |||||||| ||||| || || || |||||
Sbjct 203766 GTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTAAC 203825
Query 46582 AAAGATTTGCAT 46593
|||||| |||||
Sbjct 203826 AAAGATCTGCAT 203837
>seq1
Length=2015588
Score = 111 bits (122), Expect = 2e-19
Identities = 94/116 (81%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| |||||||| || || ||||| |||| ||||||||||||||||||||
Sbjct 1818643 CTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1818584
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA 46517
|||| |||||||||||| | || | || |||||||||| ||||| |||||
Sbjct 1818583 GATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGA 1818528
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565237912481880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |