Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq19 279 6e-70
seq13 136 5e-27
seq9 132 6e-26
>seq19
Length=568126
Score = 279 bits (308), Expect = 6e-70
Identities = 906/1391 (65%), Gaps = 27/1391 (2%)
Strand=Plus/Plus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
|| ||| ||||| ||||||| ||||| |||||||||| || | || || || |
Sbjct 48339 CCCCAGCACATGCTCATGCGTGTCGCCGTCGGTATCCACGGCCAGGACATCGAGAGCGCC 48398
Query 111672 TTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCTT 111730
| ||||| ||| || ||||| | ||| || | ||||| | || ||||||||
Sbjct 48399 ATTGAGACCTACAACCTCATGTCGCAAAAGTACTTT-ACACACGCCTCCCCCACCCTCTT 48457
Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790
|||||| ||||| || || || | || || ||||| | | | ||||| ||
Sbjct 48458 CAACGCAGGTACCCCGCACCCTCAGCTCTCGTCGTGCTTCCTCGTCACCATGAAGGACGA 48517
Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850
|| ||| ||||||| |||| ||| |||| |||||| ||||| ||| || ||
Sbjct 48518 CTCGATCGATGGCATCTACGACACGCTCAAGACGTGTGCCATGATCTCCAAGACCGCCGG 48577
Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAA 111910
||||||||| | ||||||| || | | || | || ||| ||||| ||
Sbjct 48578 TGGTATCGGCCTCAACATCCACTGCATCCGCGGCACCGGTTCCTACATTGCCGGTACCAA 48637
Query 111911 TGGTCAATCAG--ATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968
||| |||| | ||||| | || ||||| ||||| || ||| ||| || |||||
Sbjct 48638 CGGTG--TCAGCAACGGTATCGTGCCCATGCTCCGCGTCTTCAACAACACCGCCCGCTAC 48695
Query 111969 GTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022
|| |||| | ||| ||||| | || | | || | || |||||||||||
Sbjct 48696 GTCGACCAGGGTGGCAACAAGCGTCCC---GGTGCCTTTGCCATTTACGTTGAGCCATGG 48752
Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGG 112082
||| |||| || | |||||||| || | || ||||| || | ||||||| |||
Sbjct 48753 CACTCGGACGTCTTTGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTGCGT 48812
Query 112083 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 112142
||| || ||||||| ||| |||||| | || ||||||||||||||||| || ||| ||
Sbjct 48813 GCCCGAGAGCTCTTCTACGCACTCTGGGTGCCCGATCTCTTCATGAAGAGGGTCGAGCAG 48872
Query 112143 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGT 112202
| ||| | ||||| ||| | || || || || ||||| ||| | || | ||
Sbjct 48873 AACGGCGACTGGTCGCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCTGACTGCTACGGC 48932
Query 112203 GAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCG-ACGGT 112261
|| |||||||| ||||||| ||||||| || | || || | ||| || ||
Sbjct 48933 GACGAGTTTGAGCGCCTCTACGAGCGCTACGAGGCCGAGGGCCGTGCCA-AGCGCACCGT 48991
Query 112262 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320
| || | || | | ||| | || || ||| |||| || |||||||| || | || |
Sbjct 48992 -CAAGGCCCAGAAGCTCTGGTACGCCATCCTCGAGTCGCAGACCGAGACCGGCAACCCCT 49050
Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380
|| || ||||| || ||| ||||| ||||| || || ||||| | || ||||
Sbjct 49051 TCATCCTCTACAAGGATGCCGCTAACCGCAAGAGCAACCAGAAGAACCTCGGCACCATCA 49110
Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440
|| | |||||| | || || || || | || | | | | || ||| |||||| |
Sbjct 49111 AGTGCTCCAACTTGTGCACCGAGATTATCGAGTACAGCGCCCCCGACGAGGTGGCTGTCT 49170
Query 112441 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATT 112500
| ||| | || || ||||| ||||||| | | || || | | ||||| | || |
Sbjct 49171 GCAACTTGGCCTCGATCGCCCTCCCCACCTTCATCGACCCCGTCGCCAAGACGTACGACT 49230
Query 112501 ATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATA 112560
|| || ||||| || | || | || || ||||| |||| | || || |
Sbjct 49231 TCAAACGTCTGCACGAGGTCGCCAAGGCCATCTGCAAGAACCTTAACAAGATCATCGACA 49290
Query 112561 GAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTC 112620
|| | |||||||| ||| || ||| ||| || ||| | |||||||| || |||
Sbjct 49291 TCAACTACTACCCCGTCGAGGAGGCCCGTCGATCCAACATGCGCCACCGTCCCATCGGTA 49350
Query 112621 TCGGTGTCCAAGGTCTCGCGGATGTATTCAT--TCTTTGTCGCCACGCATTTGATTCCGA 112678
|||||||||| ||||| || || | ||||| || | | || |||| ||||| ||
Sbjct 49351 TCGGTGTCCAGGGTCTTGCCGACGCCTTCATGATCATGG--GCTACGCCTTTGAGTCTCC 49408
Query 112679 CGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGC 112738
||| || |||| | || ||| || ||||| || || ||||||||||| || ||
Sbjct 49409 CGAGGCTCGTCGTCTCAACGTGCATATCTTCGAGACCATCTACCACGCCGCTCTCGA-GC 49467
Query 112739 GA--GTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCT 112796
|| || | ||| |||| || | || | || || |||| | || || || |||
Sbjct 49468 GATCGTGC-GAGCTGGCTCAGCAGCACGGCACCTACGAGACCTACGCCGGCTCGCCCGCT 49526
Query 112797 TCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGG 112856
|| || || | ||| || | || ||||||| | || | | || ||||||
Sbjct 49527 TCGCAGGGTGAGCTGCAGTACGACATGTGGGGCGTCACCCCCTCGGACCTCTGGGACTGG 49586
Query 112857 GACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCA 112916
| || ||||||| ||| || | ||||| || ||| ||| || | || ||
Sbjct 49587 GCCGAGCTCAAGGCCAAGATCGCCAAGCACGGTCTGCGCAACTCGCTTCTGCTCGCTCCC 49646
Query 112917 ATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACG 112976
||||| || ||||| ||| || ||| | || || || ||||| || || ||||||
Sbjct 49647 ATGCCCACCGCCTCGACCAGTCAGATCCTCGGCTTCAACGAGTGCTTCGAGCCTTACACG 49706
Query 112977 ACGAACATCTA 112987
| ||||||||
Sbjct 49707 TCCAACATCTA 49717
>seq13
Length=657001
Score = 136 bits (150), Expect = 5e-27
Identities = 240/347 (69%), Gaps = 6/347 (2%)
Strand=Plus/Minus
Query 176723 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 176782
|||| ||||||||||||||||| |||||||||| ||| ||| ||||||| |||||
Sbjct 372959 TTGATGATGAGACCCTTGATGTGCGAACCGTCGTGATCCTGATCGGTCATGACCATGATG 372900
Query 176783 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 176842
| || || || || | || || |||| | ||| || || || ||||||||||||
Sbjct 372899 CTGCCGTATCGCAGACTGTTCACGTCAAGATACTGCTTGCCGTGCTGCAGACCCAAGATC 372840
Query 176843 TTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAACA 176902
| ||||| | |||| ||| ||| ||| ||| | |||||| ||||| ||
Sbjct 372839 TCCTTGATGGCCTTGATCTCGGCGTTCTTCATGATCTGATCGTGAGAGGCTTCACGGACG 372780
Query 176903 TTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGA 176962
||| ||| ||||| || ||||| |||||||||| || | || ||| | || |
Sbjct 372779 TTCAAGAGCTTACCACGGAGCGGGAACACACCGTAGTTGTCTCTTCCGACCTCGACGATA 372720
Query 176963 CCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACA---CTTG 177019
|| || || ||||||| || || || ||||| || || | |||||| || || ||||
Sbjct 372719 CCAGCGACGGCGAGCGACTTGGCCGAGTCACCTTCGGTGAGGATGAGCGTGCAGTCCTTG 372660
Query 177020 CCAGATTGTGCCGTACCCGCCTTGTTCGCATCATCCAATTTGGGAAT 177066
| | |||| ||| || ||||| ||||| || | ||||| ||
Sbjct 372659 GC-TTTCCTGCC--ACCGGCATTGTTGGCATCCTCGAGCTTGGGGAT 372616
>seq9
Length=823499
Score = 132 bits (146), Expect = 6e-26
Identities = 124/158 (78%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 102174 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 102233
|| || ||||| ||| |||| ||||| ||||| || ||||||||||| || ||||||
Sbjct 594042 TTCGCCGAGCGTCTCGTCGCCTTTGCCGCCGTTGAAGGCATCTTCTTCTCCGGCTCCTTC 593983
Query 102234 TGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAG 102293
| | || | |||||||||||||| ||||||||||| |||||| |||||||||||||
Sbjct 593982 GCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAACGAG 593923
Query 102294 CTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
|| ||||| || ||||| || || ||| || |||||
Sbjct 593922 CTCATCTCGCGCGACGAAGGTCTGCACACCGACTTTGC 593885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620741864609680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |