Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq19 228 1e-54 seq3 109 6e-19 seq9 84.2 3e-11 >seq19 Length=568126 Score = 228 bits (252), Expect = 1e-54 Identities = 1055/1648 (64%), Gaps = 47/1648 (3%) Strand=Plus/Minus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559 ||| | |||||| ||||| |||||| |||||| || || |||||||||||||| Sbjct 49970 GTTGAGCGACTGCGACTGGCAGATGAAAGCACCACGGTCGGCGGCCATGTCGATGATGGC 49911 Query 109560 CTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCAC 109619 ||| ||||| || |||||||| |||||||| | |||||||| ||||| ||| | Sbjct 49910 CTTCTGGCTGATCTCCCAGACGGTCTTGTAGAGCTTCTTGATGCGGTCGGGGATGCCGGG 49851 Query 109620 GATGTTTTGAATAGAGCCACC---AGCCTTCACCATGAGATCCTTCATCTCTTTCGA-CC 109675 | ||| || || || || || ||| | | || | | ||||||| | ||| || Sbjct 49850 CACGTTCTGGATGGAACCGCCGTGAGCGATGA---TGCGGTTCTTCATCG-TGTCGTTCC 49795 Query 109676 AGAGACCGACCTTTTTGAGATCGT----CAACAAGATGCTTGTTGACCACGACAAATTCA 109731 | ||||| || ||| ||| |||| | | | ||| ||||| || ||| Sbjct 49794 ACAGACCCTGCTCGACGAGCTCGCGGAGCAACCA-AGG---GTTCACCACCTGGAACTCA 49739 Query 109732 CCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTG 109791 || || || || || ||||||||| | |||||| || ||||| ||||| ||| | Sbjct 49738 CCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCGTTGAAG 49679 Query 109792 CCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGA 109851 || ||||| || || || || |||||||||||||| | ||||| ||| || ||| Sbjct 49678 CCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGCAGAAGCGAGTTGCGCAGA 49619 Query 109852 CCCTTCGTCTTTACCCGCTCACGCATTG----CGTCCCAATCATA-ACGACCACTAAATT 109906 || | | || | || || ||| || |||| || | | | || | Sbjct 49618 CCGTGC---TTGGCGATCTTG-GCCTTGAGCTCGGCCCAGTCCCAGAGGTCCG----AGG 49567 Query 109907 TAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGA 109966 || | || |||||| || || || |||||| | ||| || || || | Sbjct 49566 GGGTGACGCC---CCACATGTCGTACTGCAGCTCACCCTGCGAAGCGGGCGAGCCGGCGT 49510 Query 109967 AACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGAT 110026 | ||||||| | || | || |||| |||| | || ||| || || || || | Sbjct 49509 AGGTCTCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCACGATCGCTCGAGAGCGGCGTGGT 49450 Query 110027 ACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGG-GAAGA 110085 | || ||||| || ||||| | || | | |||| ||| | | || |||| | || Sbjct 49449 AGATGGTCTCGAAGATATGCACGTTGAGACGACGAGCCTCGGGAGACTCAAAGGCGTAGC 49390 Query 110086 CCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTC 110145 ||| | | | || | || || |||||||| ||||||| ||| ||||| || || | Sbjct 49389 CCATGATCA-TGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATGGGACGGTGGCGC 49331 Query 110146 ATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGA 110205 ||||| || || || || || |||||||| ||||| |||||||| | || || Sbjct 49330 ATGTTGGATCGACGGGCCTCCTCGACGGGGTAGTAGTTGATGTCGATGATCTTGTTAAGG 49271 Query 110206 TTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCC 110265 ||||| | | ||| | || || || || | | | ||| |||| || | | Sbjct 49270 TTCTTGCAGATGGCCTTGGCGACCTCGTGCAGACGTTTGAAGTCGTACGTCTTGGCGACG 49211 Query 110266 TTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTG 110325 | || | ||||||| || || || || | ||||| |||| |||||| | Sbjct 49210 GGGTCGATGAAGGTGGGGAGGGCGATCGAGGCCAAGTTGCAGACAGCCACCTCGTCGGGG 49151 Query 110326 TCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTC 110385 || |||| || | ||| || || ||||||||||| | ||| ||| || | ||||||| Sbjct 49150 GCGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGCACTTGATGGTGCCGAGGTTCTTC 49091 Query 110386 TGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTC 110445 || || ||| ||| |||||||| ||||| ||| | ||| | || || || ||| Sbjct 49090 TGGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGATGAAGGGGTTGCCGGTCTCGGTC 49031 Query 110446 TGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCG-TTAGCGAGAC 110503 || |||| ||| ||||| | ||| | | || | ||| ||| | |||| || || | | Sbjct 49030 TGCGACTCGAGGATGGCGTACCAGAGCTTCTG-GGCCTTGAC-GGTGCGCTTGGCACGGC 48973 Query 110504 CTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGAC 110563 | || ||||||| ||| | | |||||| || | ||||| |||| || | Sbjct 48972 CCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCAAACTCGTCGCCGTAGCAGTCAGCGAGGC 48913 Query 110564 CCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGA 110623 | || || ||| || | ||| ||||| | || || ||| ||||||||||||| Sbjct 48912 CGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGTTCTGCTCGACCCTCTTCATGA 48853 Query 110624 ACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTT 110683 | || || || | ||| | || |||| || || ||| ||| |||| || | || | Sbjct 48852 AGAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTCGGGCACGCACCTCCTCCTTGCCGT 48793 Query 110684 GGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAG 110743 |||| ||| || || | || || | || |||||||||||||| || | || | | Sbjct 48792 GGTTCTTGCGGAGGTCGAGGAACTCAAAGACGTCCGAGTGCCATGGCTCAACGTAAATGG 48733 Query 110744 CGATGGATCCCTTACG---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGA 110800 | | || || ||| || |||||| || ||||| || ||| ||||||| Sbjct 48732 CAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTAGCGGGCGGTGTTGTTGAAGA 48673 Query 110801 CCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTAT 110860 | | |||||| || | || || | | ||| || ||||| ||| ||| Sbjct 48672 CGCGGAGCATGGGCACGATACCGTTGCTGACACCGTTGGTACCGGCAATGTAGGAACCGG 48613 Query 110861 TGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC 110920 || | || ||| |||||| | | || |||||||| || ||| || |||| Sbjct 48612 TGCCGCGGATGCAGTGGATGTTGAGGCCGATACCACCGGCGGTCTTGGAGATCATGGCAC 48553 Query 110921 AC-TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAG 110979 || ||| |||| || | || || ||||| ||||| || |||| ||| | || ||| Sbjct 48552 ACGTCT-TGAGCGTGTCGTAGATGCCATCGATCGAGTCGTCCTTCATGGTGACGAGGAAG 48494 Query 110980 CAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATG 111039 || || || | |||||| | || || || || |||||||| || || | || || || Sbjct 48493 CACGACGAGAGCTGAGGGTGCGGGGTACCTGCGTTGAAGAGGGTGGGGGAGGCGTG--TG 48436 Query 111040 AACAG-AC-CTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGT 111097 | || || ||| ||||| |||||| || || | ||| | || | |||| Sbjct 48435 TAAAGTACTTTTGCGACATGAGGTTGTAGGTCTCAATGGCGCTCTCGATGTCCTGGCCGT 48376 Query 111098 GAATACCAATGGCAACTCGCATGAACAT 111125 | ||||| | ||| || ||||||| ||| Sbjct 48375 GGATACCGACGGCGACACGCATGAGCAT 48348 >seq3 Length=1272512 Score = 109 bits (120), Expect = 6e-19 Identities = 317/477 (66%), Gaps = 17/477 (4%) Strand=Plus/Minus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 || ||||| ||||| || || | || ||| |||| || | || ||||| ||| || Sbjct 342386 CGGTCGAATCGACCGGGACGCATGAGCGCAGCATCGAGCACGTCCGGTCGGTTGGTACCG 342327 Query 11563 GCAATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTG 11622 || | || || | | ||| | ||||||||||||| | ||| | || |||| Sbjct 342326 GCCAGCACGACGACGTGCTCCTCGGTACCGAAACCGTCCATCTGCACGAGCAACTCGTTG 342267 Query 11623 ATCGTCTGTTCACGCTCATCGTTGGAGGGCATA---CCACC--TGCCGAACGCTTCTTAC 11677 | ||| || ||||| |||||| | | | ||||| |||| ||| |||||| Sbjct 342266 AGCGTTGACTCGCGCTCGTCGTTGCCGCCAAAATTGCCACCCTTGCC--ACGGCTCTTAC 342209 Query 11678 CGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTT--C 11735 ||| ||||| ||||| ||||| || | ||| || || || | | || | ||| | Sbjct 342208 CGATGGCGTCGATCTCGTCGATAAAGATGATGCAGGGCGCGT-GCTTCTTGGC-GTTGGC 342151 Query 11736 GAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGC 11795 ||| | || || || || | | || ||||| || ||||| || || || | | | Sbjct 342150 GAACATGTCTCGCACTCGGCTAGGACCGACACCGACAAACATTTCGACAAACTCGGAACC 342091 Query 11796 AGAACACTGA-ATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCT 11854 || || || | |||||| ||| || |||||| ||| |||| || || || |||| Sbjct 342090 CGAG-ACGGACAGGAAGGGCACACCAGCCTCACCGGCGGTGGCCTTGGCAAGCAGCGTCT 342032 Query 11855 TACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACTTCC 11912 |||| ||||| || | ||| | ||| | |||||||| ||||||||||| || ||| Sbjct 342031 TACCGGTACCGGGAGGACCGGAGAGGATAGCGCCACGCGGGATCTTGGCGCCGAGCTT-- 341974 Query 11913 AAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 ||| || |||||||||||||||| |||| |||| | || |||||||| Sbjct 341973 TTCGTACTTTTCGGGCTTCTTGAGGAAGTTGACAAACTCCATGATCTCTTCCTTGGC 341917 >seq9 Length=823499 Score = 84.2 bits (92), Expect = 3e-11 Identities = 167/244 (68%), Gaps = 5/244 (2%) Strand=Plus/Plus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554 |||||| || || || ||||| || || ||||||||||| || |||| || || Sbjct 593884 GGCAAAGTCGGTGTGCAGACCTTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGACC 593943 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614 |||||||| || | ||||| ||||| ||||||| || || || |||||||| Sbjct 593944 GGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGAT 594003 Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAG-GTCGAGACTTGTC---GA 119670 ||| || || ||| || |||| |||||||| || |||| | || | |||||| || Sbjct 594004 GCCTTCAACGGCGGCAAAGGCGACGAGACGCTCGGCGAAAGTGGCGCG-CTTGTCGCTGA 594062 Query 119671 ACCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGA 119730 ||| || ||||||| ||| || ||| | | ||||| || | || ||| || | Sbjct 594063 TCCATCGCAGCGCCCAGTCGGCTTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTCAA 594122 Query 119731 AAAG 119734 | || Sbjct 594123 AGAG 594126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975492008200