Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq19 228 1e-54
seq3 109 6e-19
seq9 84.2 3e-11
>seq19
Length=568126
Score = 228 bits (252), Expect = 1e-54
Identities = 1055/1648 (64%), Gaps = 47/1648 (3%)
Strand=Plus/Minus
Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559
||| | |||||| ||||| |||||| |||||| || || ||||||||||||||
Sbjct 49970 GTTGAGCGACTGCGACTGGCAGATGAAAGCACCACGGTCGGCGGCCATGTCGATGATGGC 49911
Query 109560 CTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCAC 109619
||| ||||| || |||||||| |||||||| | |||||||| ||||| ||| |
Sbjct 49910 CTTCTGGCTGATCTCCCAGACGGTCTTGTAGAGCTTCTTGATGCGGTCGGGGATGCCGGG 49851
Query 109620 GATGTTTTGAATAGAGCCACC---AGCCTTCACCATGAGATCCTTCATCTCTTTCGA-CC 109675
| ||| || || || || || ||| | | || | | ||||||| | ||| ||
Sbjct 49850 CACGTTCTGGATGGAACCGCCGTGAGCGATGA---TGCGGTTCTTCATCG-TGTCGTTCC 49795
Query 109676 AGAGACCGACCTTTTTGAGATCGT----CAACAAGATGCTTGTTGACCACGACAAATTCA 109731
| ||||| || ||| ||| |||| | | | ||| ||||| || |||
Sbjct 49794 ACAGACCCTGCTCGACGAGCTCGCGGAGCAACCA-AGG---GTTCACCACCTGGAACTCA 49739
Query 109732 CCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTG 109791
|| || || || || ||||||||| | |||||| || ||||| ||||| ||| |
Sbjct 49738 CCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCGTTGAAG 49679
Query 109792 CCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGA 109851
|| ||||| || || || || |||||||||||||| | ||||| ||| || |||
Sbjct 49678 CCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGCAGAAGCGAGTTGCGCAGA 49619
Query 109852 CCCTTCGTCTTTACCCGCTCACGCATTG----CGTCCCAATCATA-ACGACCACTAAATT 109906
|| | | || | || || ||| || |||| || | | | || |
Sbjct 49618 CCGTGC---TTGGCGATCTTG-GCCTTGAGCTCGGCCCAGTCCCAGAGGTCCG----AGG 49567
Query 109907 TAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGA 109966
|| | || |||||| || || || |||||| | ||| || || || |
Sbjct 49566 GGGTGACGCC---CCACATGTCGTACTGCAGCTCACCCTGCGAAGCGGGCGAGCCGGCGT 49510
Query 109967 AACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGAT 110026
| ||||||| | || | || |||| |||| | || ||| || || || || |
Sbjct 49509 AGGTCTCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCACGATCGCTCGAGAGCGGCGTGGT 49450
Query 110027 ACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGG-GAAGA 110085
| || ||||| || ||||| | || | | |||| ||| | | || |||| | ||
Sbjct 49449 AGATGGTCTCGAAGATATGCACGTTGAGACGACGAGCCTCGGGAGACTCAAAGGCGTAGC 49390
Query 110086 CCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTC 110145
||| | | | || | || || |||||||| ||||||| ||| ||||| || || |
Sbjct 49389 CCATGATCA-TGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATGGGACGGTGGCGC 49331
Query 110146 ATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGA 110205
||||| || || || || || |||||||| ||||| |||||||| | || ||
Sbjct 49330 ATGTTGGATCGACGGGCCTCCTCGACGGGGTAGTAGTTGATGTCGATGATCTTGTTAAGG 49271
Query 110206 TTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCC 110265
||||| | | ||| | || || || || | | | ||| |||| || | |
Sbjct 49270 TTCTTGCAGATGGCCTTGGCGACCTCGTGCAGACGTTTGAAGTCGTACGTCTTGGCGACG 49211
Query 110266 TTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTG 110325
| || | ||||||| || || || || | ||||| |||| |||||| |
Sbjct 49210 GGGTCGATGAAGGTGGGGAGGGCGATCGAGGCCAAGTTGCAGACAGCCACCTCGTCGGGG 49151
Query 110326 TCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTC 110385
|| |||| || | ||| || || ||||||||||| | ||| ||| || | |||||||
Sbjct 49150 GCGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGCACTTGATGGTGCCGAGGTTCTTC 49091
Query 110386 TGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTC 110445
|| || ||| ||| |||||||| ||||| ||| | ||| | || || || |||
Sbjct 49090 TGGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGATGAAGGGGTTGCCGGTCTCGGTC 49031
Query 110446 TGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCG-TTAGCGAGAC 110503
|| |||| ||| ||||| | ||| | | || | ||| ||| | |||| || || | |
Sbjct 49030 TGCGACTCGAGGATGGCGTACCAGAGCTTCTG-GGCCTTGAC-GGTGCGCTTGGCACGGC 48973
Query 110504 CTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGAC 110563
| || ||||||| ||| | | |||||| || | ||||| |||| || |
Sbjct 48972 CCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCAAACTCGTCGCCGTAGCAGTCAGCGAGGC 48913
Query 110564 CCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGA 110623
| || || ||| || | ||| ||||| | || || ||| |||||||||||||
Sbjct 48912 CGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGTTCTGCTCGACCCTCTTCATGA 48853
Query 110624 ACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTT 110683
| || || || | ||| | || |||| || || ||| ||| |||| || | || |
Sbjct 48852 AGAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTCGGGCACGCACCTCCTCCTTGCCGT 48793
Query 110684 GGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAG 110743
|||| ||| || || | || || | || |||||||||||||| || | || | |
Sbjct 48792 GGTTCTTGCGGAGGTCGAGGAACTCAAAGACGTCCGAGTGCCATGGCTCAACGTAAATGG 48733
Query 110744 CGATGGATCCCTTACG---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGA 110800
| | || || ||| || |||||| || ||||| || ||| |||||||
Sbjct 48732 CAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTAGCGGGCGGTGTTGTTGAAGA 48673
Query 110801 CCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTAT 110860
| | |||||| || | || || | | ||| || ||||| ||| |||
Sbjct 48672 CGCGGAGCATGGGCACGATACCGTTGCTGACACCGTTGGTACCGGCAATGTAGGAACCGG 48613
Query 110861 TGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC 110920
|| | || ||| |||||| | | || |||||||| || ||| || ||||
Sbjct 48612 TGCCGCGGATGCAGTGGATGTTGAGGCCGATACCACCGGCGGTCTTGGAGATCATGGCAC 48553
Query 110921 AC-TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAG 110979
|| ||| |||| || | || || ||||| ||||| || |||| ||| | || |||
Sbjct 48552 ACGTCT-TGAGCGTGTCGTAGATGCCATCGATCGAGTCGTCCTTCATGGTGACGAGGAAG 48494
Query 110980 CAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATG 111039
|| || || | |||||| | || || || || |||||||| || || | || || ||
Sbjct 48493 CACGACGAGAGCTGAGGGTGCGGGGTACCTGCGTTGAAGAGGGTGGGGGAGGCGTG--TG 48436
Query 111040 AACAG-AC-CTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGT 111097
| || || ||| ||||| |||||| || || | ||| | || | ||||
Sbjct 48435 TAAAGTACTTTTGCGACATGAGGTTGTAGGTCTCAATGGCGCTCTCGATGTCCTGGCCGT 48376
Query 111098 GAATACCAATGGCAACTCGCATGAACAT 111125
| ||||| | ||| || ||||||| |||
Sbjct 48375 GGATACCGACGGCGACACGCATGAGCAT 48348
>seq3
Length=1272512
Score = 109 bits (120), Expect = 6e-19
Identities = 317/477 (66%), Gaps = 17/477 (4%)
Strand=Plus/Minus
Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562
|| ||||| ||||| || || | || ||| |||| || | || ||||| ||| ||
Sbjct 342386 CGGTCGAATCGACCGGGACGCATGAGCGCAGCATCGAGCACGTCCGGTCGGTTGGTACCG 342327
Query 11563 GCAATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTG 11622
|| | || || | | ||| | ||||||||||||| | ||| | || ||||
Sbjct 342326 GCCAGCACGACGACGTGCTCCTCGGTACCGAAACCGTCCATCTGCACGAGCAACTCGTTG 342267
Query 11623 ATCGTCTGTTCACGCTCATCGTTGGAGGGCATA---CCACC--TGCCGAACGCTTCTTAC 11677
| ||| || ||||| |||||| | | | ||||| |||| ||| ||||||
Sbjct 342266 AGCGTTGACTCGCGCTCGTCGTTGCCGCCAAAATTGCCACCCTTGCC--ACGGCTCTTAC 342209
Query 11678 CGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTT--C 11735
||| ||||| ||||| ||||| || | ||| || || || | | || | ||| |
Sbjct 342208 CGATGGCGTCGATCTCGTCGATAAAGATGATGCAGGGCGCGT-GCTTCTTGGC-GTTGGC 342151
Query 11736 GAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGC 11795
||| | || || || || | | || ||||| || ||||| || || || | | |
Sbjct 342150 GAACATGTCTCGCACTCGGCTAGGACCGACACCGACAAACATTTCGACAAACTCGGAACC 342091
Query 11796 AGAACACTGA-ATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCT 11854
|| || || | |||||| ||| || |||||| ||| |||| || || || ||||
Sbjct 342090 CGAG-ACGGACAGGAAGGGCACACCAGCCTCACCGGCGGTGGCCTTGGCAAGCAGCGTCT 342032
Query 11855 TACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACTTCC 11912
|||| ||||| || | ||| | ||| | |||||||| ||||||||||| || |||
Sbjct 342031 TACCGGTACCGGGAGGACCGGAGAGGATAGCGCCACGCGGGATCTTGGCGCCGAGCTT-- 341974
Query 11913 AAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969
||| || |||||||||||||||| |||| |||| | || ||||||||
Sbjct 341973 TTCGTACTTTTCGGGCTTCTTGAGGAAGTTGACAAACTCCATGATCTCTTCCTTGGC 341917
>seq9
Length=823499
Score = 84.2 bits (92), Expect = 3e-11
Identities = 167/244 (68%), Gaps = 5/244 (2%)
Strand=Plus/Plus
Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554
|||||| || || || ||||| || || ||||||||||| || |||| || ||
Sbjct 593884 GGCAAAGTCGGTGTGCAGACCTTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGACC 593943
Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614
|||||||| || | ||||| ||||| ||||||| || || || ||||||||
Sbjct 593944 GGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGAT 594003
Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAG-GTCGAGACTTGTC---GA 119670
||| || || ||| || |||| |||||||| || |||| | || | |||||| ||
Sbjct 594004 GCCTTCAACGGCGGCAAAGGCGACGAGACGCTCGGCGAAAGTGGCGCG-CTTGTCGCTGA 594062
Query 119671 ACCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGA 119730
||| || ||||||| ||| || ||| | | ||||| || | || ||| || |
Sbjct 594063 TCCATCGCAGCGCCCAGTCGGCTTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTCAA 594122
Query 119731 AAAG 119734
| ||
Sbjct 594123 AGAG 594126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975492008200
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