Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq11 123 2e-23
seq18 113 3e-20
>seq11
Length=758843
Score = 123 bits (136), Expect = 2e-23
Identities = 146/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844
||||| || ||||||||||| ||||||||||| | || |||| |||||||| || ||
Sbjct 158044 GTGCTCTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCATCCTCCAGCTGCTTACCA 158103
Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904
||||| || | || |||||||| | || | ||||||||||| ||||| |||
Sbjct 158104 GCAAAGATCAAGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTG 158163
Query 34905 ACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTC 34964
||| | || | || || ||| ||||||| || ||||| || |||||||| |||
Sbjct 158164 ACGTTGTCAATAGTATCCGAGGACTCGACATCGAGCGTAATGGTCTTGCCCGTGAGCGTC 158223
Query 34965 TTCACAAAGATCTGCATA 34982
|| |||||||| ||||||
Sbjct 158224 TTGACAAAGATTTGCATA 158241
Score = 96.9 bits (106), Expect = 2e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| || || |||||| | || | || || ||||| || ||||||||
Sbjct 158506 TCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAG 158565
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || ||||| || | || | ||||||||||| |||||| ||||||
Sbjct 158566 ATGAGACGCTGCTGATCAGGTGGGATACCCTCCTTGTCTTGAATCTTGGCCTTGACGTTG 158625
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || | ||| || |||| ||| || || || || || |||||||| |||
Sbjct 158626 TCGATAGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTACCGGTCAGAGTCTTGACA 158685
Query 34971 AAGATCTGCAT 34981
|||||||||||
Sbjct 158686 AAGATCTGCAT 158696
Score = 93.3 bits (102), Expect = 3e-14
Identities = 144/202 (71%), Gaps = 8/202 (4%)
Strand=Plus/Plus
Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844
||||| || ||||||||||| ||||| || || | || | || || ||||| || ||
Sbjct 158272 GTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCGAGCTGCTTACCA 158331
Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904
|| || || ||||| |||||||| |||| | ||||||||||| ||||| |||
Sbjct 158332 GCGAAAATGAGTCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGGATCTTGGCTTTC 158391
Query 34905 ACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAG 34960
|| || | ||||| | ||| | ||| || || | || || || ||||| |||||
Sbjct 158392 AC--AT--TGTCGATCGTGTCCGAAGACTCGACCTCCAGTGTGATCGTCTTTCCTGTGAG 158447
Query 34961 AGTCTTCACAAAGATCTGCATA 34982
||||| || || |||||||||
Sbjct 158448 CGTCTTGACGAAAATCTGCATA 158469
>seq18
Length=577775
Score = 113 bits (124), Expect = 3e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| ||||| ||||| ||||| | || | || || ||||| ||||| |||||
Sbjct 203646 TTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCGAGCTGCTTTCCTGCAAA 203705
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| ||||| ||||| || | || | || |||||||| ||||| ||||||
Sbjct 203706 GATAAGTCGCTGCTGATCGGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTT 203765
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| || | ||| || ||| || |||| ||| ||||| || || ||||||||||| ||
Sbjct 203766 GTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTAAC 203825
Query 34970 AAAGATCTGCAT 34981
||||||||||||
Sbjct 203826 AAAGATCTGCAT 203837
Score = 107 bits (118), Expect = 1e-18
Identities = 152/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828
|||||||||||| | || || ||||| || || ||||| |||||| | || | ||
Sbjct 203397 CAAAACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGAAAGGGTACGGCCGTC 203456
Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888
|| ||||| || |||||||| || || || ||||| || | || | || ||||||||
Sbjct 203457 TTCAAGCTGCTTGCCGGCAAAAATAAGCCGCTGCTGATCGGGTGGGATGCCTTCCTTGTC 203516
Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948
||||| |||||| | || | ||| || ||| || |||| || |||||
Sbjct 203517 TTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACCTCGAGAGTGATGGT 203576
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || || |||||||| |||||||||||||||
Sbjct 203577 CTTGCCGGTCAGAGTCTTGACAAAGATCTGCATA 203610
Score = 95.1 bits (104), Expect = 8e-15
Identities = 153/216 (71%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | || || ||||| ||||| |||||||||||| | | | || ||
Sbjct 283461 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGTGGCCGTCCTCA 283520
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || || || || || || || |||||||| | || | |||||||||||
Sbjct 283521 AGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 283580
Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGT 34948
||||| ||||| || | ||||| | ||| | ||| || |||| || |||||
Sbjct 283581 ATCTTGGCCTTGAC--AT--TGTCGATGGTGTCCGAAGACTCGACCTCGAGAGTGATGGT 283636
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
|| |||||||| ||||| || ||||||||||| ||
Sbjct 283637 CTTACCCGTGAGGGTCTTAACGAAGATCTGCATCTT 283672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324633327003432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |