Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq19 432 7e-116 seq9 237 3e-57 >seq19 Length=568126 Score = 432 bits (478), Expect = 7e-116 Identities = 1284/1952 (66%), Gaps = 90/1952 (5%) Strand=Plus/Minus Query 212577 GCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGGCCCTTGCCCCAGCCGTGCATG 212636 |||| |||||| || || ||||| | |||||||| || ||||| |||||||| | | Sbjct 50074 GCAGGCTTGGTACGCAGGTAGTAGGTACCGGTCTTGAGACCCTTCTTCCAGCCGTAGAAG 50015 Query 212637 TGCATTGCTGTGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTGGCCCAGATGTAGG 212696 ||||| | ||||| | || || ||| | || | || || | | Sbjct 50014 TGCATCGAGGTGAGCTG-----GCCAAA------GGTAGGCGCCGAG----AGGTGAATG 49970 Query 212697 TTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATCT 212756 || || ||||| |||| ||||| | | | ||| ||||||||||| ||||| | Sbjct 49969 TTGAGCGACTGCGACTGGCAGATGAAAGCACCACGGTCGGCGGCCATGTCGATGATGGCC 49910 Query 212757 CTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGGG 212816 ||||| || |||||| ||||||||| ||| | |||| | || |||| |||||| Sbjct 49909 TTCTGGCTGATCTCCCAGACGGTCTTGTAGAGCTTCTTGATGCGGTCGGGGATGCCGGGC 49850 Query 212817 ATGTTCTGCACAGACCCCCTGTGTATGGTCAGCTGCAGGCG--CATGTCCTCGTTCCAGA 212874 | |||||| | || || | ||| | | | ||| | ||| |||||||| | Sbjct 49849 ACGTTCTGGATGGAACCGCCGTGAGCGATGA--TGCGGTTCTTCATCGTGTCGTTCCACA 49792 Query 212875 GGCCCCTGGTCTCCAGGCACTTG-ACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGAG 212933 | ||| || || | || | | | || |||||| || | |||||| ||||| | | Sbjct 49791 GACCC-TGCTCGACGAGCTCGCGGAGCAACCAAGGGTTCACCACCTGGAACTCACCGGCG 49733 Query 212934 AGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGA 212993 ||||| | | | ||| | ||| || ||||| ||||||| || ||||||| || || Sbjct 49732 AGCACACGACGCGAGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCGTTGAAGCCGAGG 49673 Query 212994 ATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGC 213053 ||||| || ||| |||||||||||||| | ||| || ||| | || |||||| Sbjct 49672 ATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGCAGAAGCGAGTTGCGCAGACCGTGC 49613 Query 213054 TCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTC 213113 | | |||| | | ||||| ||||||||||| |||||| | | Sbjct 49612 TTGGCGATCTTGGCCTTGAGCTCGGCCCAGTCCCAG---------AGGTCCGAGGGGGTG 49562 Query 213114 ACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTG-GTAAGAGGA 213172 ||| ||||||||| |||||| | | | ||| | |||| || | ||| | Sbjct 49561 ACGCCCCACATGTCGTACTGCA-GCTCACCCTGCGAAGCGGGCGAGCCGGCGTAGGTCTC 49503 Query 213173 GTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGT 213232 ||||| ||| |||| || ||||||||||| || || || || |||| ||||||||| Sbjct 49502 GTAGGTGCCGTGCTGCTGAGCCAGCTCGCACGATCGCTCGAGAGCGGCGTGGTAGATGGT 49443 Query 213233 TTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCAT----CATCA 213288 || || || | | |||||| ||||| || ||| | || ||| | ||| | Sbjct 49442 CTCGAAGATATGCACGTTGAGACGACGAGCCTCGGGAGAC-TCAAAGGCGTAGCCCATGA 49384 Query 213289 TGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGT 213348 | | | ||| | || || || |||||||| ||||| |||||||| | ||| | || || Sbjct 49383 T-CAT--GAAGGCGTCGGCAAGACCCTGGACACCGATACCGATGGGACGGTGGCGCATGT 49327 Query 213349 TAGA-CTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTT- 213406 | || | | || |||||| | |||||| ||||| ||||||||||||||| ||||| Sbjct 49326 TGGATCGACGGGC-CTCCTCGACGGGGTAGTAGTTGATGTCGATGATCTTGTTAAGGTTC 49268 Query 213407 --GCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTA------G 213458 || | ||||| |||| ||| | | ||| ||| ||||| |||| | Sbjct 49267 TTGCAGATGGCC---TTGGCGACCTCGTGCAGA----CGT--TTGAAGTCGTACGTCTTG 49217 Query 213459 CCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCC 213518 | || | | || || |||||||| ||||| |||||| || |||||||| Sbjct 49216 GCGACGGGGTCGATGAAGGTGGGGAGGGCGATCGAGGCCAAGTTGCAGACAGCCACCTCG 49157 Query 213519 TGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGG 213578 | | | | ||||||| || ||||||||||||| |||| ||| ||||||||| ||| Sbjct 49156 TCGGGGGCGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGCACTTGATGGTGCCGAGG 49097 Query 213579 TTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTC 213638 |||| ||||| ||| ||| || | |||||||||||| ||| ||||| |||||| Sbjct 49096 TTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGATGAAGGGGTTGCCGGTC 49037 Query 213639 TCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACA 213698 || ||| ||| | || || | |||||| | | ||||||||| ||| || || Sbjct 49036 TCGGTCTGCGACTCGAGGATGGCGTACCAGAGCTTCTGGGCCTTGACGGTGCGCTTGGCA 48977 Query 213699 GCTCCGGGCGT-AGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAG-ACCC 213756 ||| | | |||||||| | |||||||| | || |||| ||| || | | Sbjct 48976 ----CGGCCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCAAACTCGTCGCCGTAGCAGTC 48921 Query 213757 TGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCG-TCATCTCTGACT 213815 | | || || || || ||| |||||||| |||||| ||| || ||| ||| Sbjct 48920 AG-CGAGGCCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGTTCTGCTC-GACC 48863 Query 213816 CTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCG 213875 |||| |||||| || || || ||||| || ||| ||| || || | || | | ||| Sbjct 48862 CTCTTCATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTCGGGCACGCACCTCC 48803 Query 213876 TCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCC 213935 ||| || ||| ||||| || || || || ||||||| ||||| |||||| ||||| Sbjct 48802 TCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAGACGTCCGAGTGCCATGGCTCA 48743 Query 213936 ATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACC 213992 | ||| ||||||||||| || | || | ||||| |||||||| || | ||| Sbjct 48742 ACGTAAATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTAGCGGGCGGTG 48683 Query 213993 ATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTG--GACTGTCCGTTGGTTCCCGCTA 214050 ||||||||| ||| || | ||| || | |||||| ||| |||||||| || || | Sbjct 48682 TTGTTGAAGACGCGGAGCATGGGCACGATACCGTTGCTGAC--ACCGTTGGTACCGGCAA 48625 Query 214051 TATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGG 214110 | || || |||| | | | | | | ||| ||| || || ||||||||| ||||| Sbjct 48624 TGTAGGAACCGGTGCCGCGGATGCAGTGGATGTTGAGGCCGATACCACCGGCGGTCTTGG 48565 Query 214111 AGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGT 214170 |||||||||| || | | | || || |||||| | || ||| || | | | Sbjct 48564 AGATCATGGCACACGTCTTGAGCGTGTCGTAGATGCCATCGATCGAGTCGTCCTTCATGG 48505 Query 214171 TCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGC 214230 | | | |||||| ||||||||| || | | || | |||||| || |||||| Sbjct 48504 TGACGAGGAAGCACGACGAGAGCTGAGGGTGCGGGGTACCTGCGTTGAAGAGGGTGGGGG 48445 Query 214231 TGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGT 214290 ||| || | | |||| | || | ||| |||||||||| | | | ||||| Sbjct 48444 AGGCGTGTGTAAAGTACTTTTGCGACATGAGGTTGTAGGTCTCAATGGCGCTCTCGATGT 48385 Query 214291 CGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGGGCCTCTCTATGGGTC 214350 | || |||||| | ||| | ||| |||||||||||||| | ||| || | | Sbjct 48384 CCTGGCCGTGGATACCGACGGCGACACGCATGAGCATGTGCTGGGGACGCTC--TGCGAC 48327 Query 214351 CTTTGGGGCCCTT------GAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTAGG 214404 ||| ||| || ||| |||||||||||||| || |||||||| || ||| || Sbjct 48326 CTT----GCCGTTGATGCGGAGGAGGTAGGAGCGCTCGAGCGTCTTGAAGCCGAAGAAGT 48271 Query 214405 AGTAG-GTATGATCGTTCCCGTGTATGAGGGCAGCGTCCAGCTCTTCCGCGTGCTCTTGG 214463 |||| | | | ||| | ||| |||| ||| | ||| |||| ||| |||||| | Sbjct 48270 TGTAGTGGAAG-TCGCGCTCGTAGATGATGGCCGAGTCGAGCTGGTCCTTGTGCTCCATG 48212 Query 214464 CTCAGCTTGAAAATCTCGTCCGAGATCAAGGG 214495 | |||| | | |||||||||||| ||| Sbjct 48211 ACGACCTTGTAGGTGGCGTCCGAGATCATGGG 48180 >seq9 Length=823499 Score = 237 bits (262), Expect = 3e-57 Identities = 389/559 (70%), Gaps = 9/559 (2%) Strand=Plus/Plus Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182 |||| | |||||||||||| |||||| |||||||| || ||||||| ||||||||| Sbjct 593874 AGAGGAGGCAGGCAAAGTCGGTGTGCAGACCTTCGTCGCGCGAGATGAGCTCGTTGGAGA 593933 Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242 || |||||| ||||||| || | || ||||||||||| || | ||||| ||||| | Sbjct 593934 AGGTGAGACCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGG 593993 Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCT 48302 ||||||||||||| || || || || || ||| ||| | ||| |||||| ||| || Sbjct 593994 AGAAGAAGATGCCTTCAACGGCGGCAAAGGCGACGAGACGCTCGGCGAAAGTGGCGCGCT 594053 Query 48303 TGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTA 48362 |||| |||||| ||||||||||| || |||| ||||| | || || ||||| | Sbjct 594054 TGTCGCTGATCCATCGCAGCGCCCAGTCGGCTTTCTGCTTGACGACGGGGATGGTCTCGA 594113 Query 48363 TGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCT 48419 ||| ||||| || || || | | || || ||||| |||| ||| Sbjct 594114 CGGCGTCAAAGAGGAGCTCGCGCTGCTCGGGCTCGCGAATGTAGGTGTCGATGAGGAGC- 594172 Query 48420 TTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGG 48479 | ||| |||| ||||| | ||||| || ||||||||| ||||||||| | | Sbjct 594173 --GAGTAGGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGAG 594230 Query 48480 CCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCAT 48539 |||| | ||||| || | | ||| | ||| | || ||||| ||||| || || | Sbjct 594231 CCTCGGCGGCTTGCACCTCGGAGCTGAAACGCTCGACGAGGTTCTCGTTGACGATACCGT 594290 Query 48540 CTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAG 48599 | ||||| || |||||||| ||||| || | || ||||| ||||||| | |||| Sbjct 594291 CGGAAGCGGCGAAGAAGGCGAGGACGTGCGAGATAAAGTGGCGTTCGTTGTCGTTGAGCT 594350 Query 48600 CATT---CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACG 48656 || |||| | || | || ||| ||||| | ||||| | ||||||||||| | Sbjct 594351 TGTTGTCCCAGTCGTGGAGATCCTTGGAAAGGTCGATCTCTTCGGCGGTCCAGAAGGAAG 594410 Query 48657 CGAGTGCTTTTTTGTACAT 48675 | || ||||||||||| Sbjct 594411 CCTCGGCCTTTTTGTACAT 594429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931531996552960