Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq19 342 1e-88
seq9 205 2e-47
>seq19
Length=568126
Score = 342 bits (378), Expect = 1e-88
Identities = 876/1320 (66%), Gaps = 33/1320 (3%)
Strand=Plus/Minus
Query 221370 CGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTCAGGGCAGCGT 221429
|||| | |||||||| |||| | | | ||| | |||| || || || || ||||
Sbjct 49512 CGTAGGTCTCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCACGATCGCTCGAGAGCGGCGT 49453
Query 221430 GGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAGGGCA 221489
||||||||||||| ||||| | |||||| | ||||||||||| | || |||
Sbjct 49452 GGTAGATGGTCTCGAAGATATGCACGTTGAGACGACGAGCCTCGGGAGAC-TCAAAGGCG 49394
Query 221490 TA-CGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGT 221548
|| | || ||| ||| ||||||| || ||||| || |||||||||||||| | |||
Sbjct 49393 TAGCCCATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATGGGACGGTGG 49334
Query 221549 CTCCTGTTGGAAG--CGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGT 221606
| | ||||||| ||| | || || | ||||| || |||||| |||||| | ||||
Sbjct 49333 CGCATGTTGGATCGACGGGC-CTCCTCG-ACGGGGTAGTAGTTGATGTCGATGATCTTGT 49276
Query 221607 TGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACT 221666
| |||||| |||| | || | |||||| ||| | ||||| | ||
Sbjct 49275 TAAGGTTCTTGCAGATGGCCTTGGCGACCTCGTGCAGAC------GTTTGAAGTCGTAC- 49223
Query 221667 CGCCGCCGTCGTGGAG--GGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACA 221724
||| ||| | ||| || | || | | ||||| | ||||| ||| ||
Sbjct 49222 -------GTCTTGGCGACGGGGTCGATGAAGGTGGGGAGGGCGATCGAGGCCAAGTTGCA 49170
Query 221725 CACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTT 221784
|| ||||||||||| | | | |||| || ||||| || || | |||| ||||||
Sbjct 49169 GACAGCCACCTCGTCGGGGGCGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGCACTT 49110
Query 221785 GATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAA 221844
|||||| || |||| || || || |||||| || || || ||||||||||| || ||
Sbjct 49109 GATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGATGAA 49050
Query 221845 GGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGCGCTC-A 221903
||| ||| ||||| ||| | | | || || || |||||| | ||||| || |
Sbjct 49049 GGGGTTGCCGGTCTCGGTCTGCGACTCGAGGATGGCGTACCAGAGCT-TCTGGGCCTTGA 48991
Query 221904 CCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTT 221963
| || | |||| | ||||||| || | | || ||||| ||||||| |
Sbjct 48990 CGGTGCGCTTGGCACGGCCCTCGGCCTCGTAGCGCTCG---TAGAGGCGCTCAAACTCGT 48934
Query 221964 CACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCTTGT 222023
| ||||| || | ||||| || ||| | ||| ||||| || ||||| ||
Sbjct 48933 CGCCGTAGCAGTCAGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGT 48874
Query 222024 TGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGG 222083
| | | |||||||| ||||||||| || || | ||| || || | ||||| |||| ||
Sbjct 48873 TCTGCTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTCGGG 48814
Query 222084 TCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGT 222143
||| ||||||| ||||| ||| || | || || | |||||||| | ||| | ||
Sbjct 48813 CACGCACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAGACGTCCGAGT 48754
Query 222144 GCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCA 222203
|||| ||||| | || | ||| | || ||||| ||||||||||||||||| || ||
Sbjct 48753 GCCATGGCTCAACGTAAATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGT 48694
Query 222204 TCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGG 222263
| | |||||||| ||| || | || || | |||||| ||||||||
Sbjct 48693 AGCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGCACGATACCGTTGCTGACACCGTTGG 48634
Query 222264 TGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAG-ACATGCCGATACCACCG 222322
| || |||||| | |||| | | | | | | ||| | | |||||||||||||
Sbjct 48633 TACCGGCAATGTAGGAACCGGTGCCGCGGATG-CAGTGGATGTTGAGGCCGATACCACCG 48575
Query 222323 GCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCC 222382
||| || ||||||||||| || ||||||| ||||| |||||| || || |||||
Sbjct 48574 GCGGTCTTGGAGATCATGGCACACGTCTTGAGCGTGTCGTAGATGCCATCGATCGAGTCG 48515
Query 222383 TCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAAC 222442
||||| | | | | || || || ||||| | ||||| | | || || ||||| ||
Sbjct 48514 TCCTTCATGGTGACGAGGAAGCACGACGAGAGCTGAGGGTGCGGGGTACCTGCGTTGAAG 48455
Query 222443 AGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACGACT 222502
|| ||||| ||||||||||||||| ||||| || | ||| ||||| | | |
Sbjct 48454 AGGGTGGGGGAGGCGTGTGTAAAGTACTTTTGCGACATGAGGTTGTAGGTCTCAATGGCG 48395
Query 222503 CTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTC 222562
|| |||||| | ||||| || | |||| | |||| ||||| |||||| | |
Sbjct 48394 CTCTCGATGTCCTGGCCGTGGATACCGACGGCGACACGCATGAGCATGTGCTGGGGACGC 48335
Query 222563 TCCACAGGACCCT--TGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAA 222620
|| | |||| | | | || ||| ||||| || || || |||||||| || |
Sbjct 48334 TCTGC--GACCTTGCCGTTGATGCGGAGGAGGTAGGAGCGCTCGAGCGTCTTGAAGCCGA 48277
Query 222621 AGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGCTCCGACTTGTGCT 222680
|| ||||| || ||||| | ||| | | ||| | ||| |||| ||||||||
Sbjct 48276 AGAAGTTGTAGTGGAAGTCGCGCTCGTAGATGATGGCCGAGTCGAGCTGGTCCTTGTGCT 48217
Score = 89.7 bits (98), Expect = 1e-12
Identities = 105/142 (74%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175
||||||||| ||||| || || | |||||| | | | ||| | ||| || ||| | ||
Sbjct 49757 GTTCACCACCTGGAACTCACCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGG 49698
Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235
|||| || ||||||| ||| ||||||||| || ||||||||||||||| || |
Sbjct 49697 CTCGAAGCACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAG 49638
Query 221236 CAGCAGACTGTTGCGCAGTCCG 221257
||| || ||||||||| |||
Sbjct 49637 CAGAAGCGAGTTGCGCAGACCG 49616
>seq9
Length=823499
Score = 205 bits (226), Expect = 2e-47
Identities = 441/655 (67%), Gaps = 22/655 (3%)
Strand=Plus/Minus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| | |||||||| ||||| | || |||||||||||||||||| || ||
Sbjct 594438 ATCTGGCAAATGTACAAAAAGGCCGAGGCTTCCTTCTGGACCGCCGAAGAGATCGACCTT 594379
Query 25537 GCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591
||||||| | ||| |||| || |||| | | | |||| | || ||| ||
Sbjct 594378 TCCAAGGATCTCCACGACTGGGACAACAAGCTCAA--CGACAACGAACGCCACTTTATCT 594321
Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651
| |||| | || ||||| || || || || ||||| || |||||||| || ||||
Sbjct 594320 CGCACGTCCTCGCCTTCTTCGCCGCTTCCGACGGTATCGTCAACGAGAACCTCGTCGAGC 594261
Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711
| |||| | || ||||| || ||||| || ||||||||||||||||| |
Sbjct 594260 GTTTCAGCTCCGAGGTGCAAGCCGCCGAGGCTCGTTGCTTCTACGGTTTCCAGATCATGA 594201
Query 25712 TCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACG 25768
| || || | ||||| ||| || | ||| || || || |||||| ||
Sbjct 594200 TGGAGAACATCCACTCGGAGACCTACTC---GCTCCTCATCGACACCTACATTCGCGAGC 594144
Query 25769 TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGG 25828
|| || | || | || |||| ||| ||||| ||| ||| | ||||| ||| |
Sbjct 594143 CCGAGCAGCGCGAGCTCCTCTTTGACGCCGTCGAGACCATCCCCGTCGTCAAGCAGAAAG 594084
Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAG 25888
| ||||| || ||||||| | | || |||| || || | |||||| || || |
Sbjct 594083 CCGACTGGGCGCTGCGATGGATCAGCGACAAGCGCGCCACTTTCGCCGAGCGTCTCGTCG 594024
Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCA 25948
||||||| || || || |||||||| ||| ||| || || || |||||||||||||||
Sbjct 594023 CCTTTGCCGCCGTTGAAGGCATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGCTCA 593964
Query 25949 AGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGG 26008
|| || || ||||||||| || ||| ||||||||||||||| | ||||| |
Sbjct 593963 AGAAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGAAG 593904
Query 26009 GTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTC 26068
|||| |||| || ||||||||||| |||| || ||||| ||| | || | | | |
Sbjct 593903 GTCTGCACACCGACTTTGCCTGCCTCCTCTTCA---GCCAC---CTCAAGAAGCGTGCAC 593850
Query 26069 A---AGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTT 26120
| || ||||| || ||||||| | || || || |||||| ||||||
Sbjct 593849 ACCCGGACACCGTGCTCAAAATCATCACCCAAGCCGTCGACATCGAGGTGGAGTT 593795
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928843998871360
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