Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq19 342 1e-88 seq9 205 2e-47 >seq19 Length=568126 Score = 342 bits (378), Expect = 1e-88 Identities = 876/1320 (66%), Gaps = 33/1320 (3%) Strand=Plus/Minus Query 221370 CGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTCAGGGCAGCGT 221429 |||| | |||||||| |||| | | | ||| | |||| || || || || |||| Sbjct 49512 CGTAGGTCTCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCACGATCGCTCGAGAGCGGCGT 49453 Query 221430 GGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAGGGCA 221489 ||||||||||||| ||||| | |||||| | ||||||||||| | || ||| Sbjct 49452 GGTAGATGGTCTCGAAGATATGCACGTTGAGACGACGAGCCTCGGGAGAC-TCAAAGGCG 49394 Query 221490 TA-CGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGT 221548 || | || ||| ||| ||||||| || ||||| || |||||||||||||| | ||| Sbjct 49393 TAGCCCATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATGGGACGGTGG 49334 Query 221549 CTCCTGTTGGAAG--CGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGT 221606 | | ||||||| ||| | || || | ||||| || |||||| |||||| | |||| Sbjct 49333 CGCATGTTGGATCGACGGGC-CTCCTCG-ACGGGGTAGTAGTTGATGTCGATGATCTTGT 49276 Query 221607 TGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACT 221666 | |||||| |||| | || | |||||| ||| | ||||| | || Sbjct 49275 TAAGGTTCTTGCAGATGGCCTTGGCGACCTCGTGCAGAC------GTTTGAAGTCGTAC- 49223 Query 221667 CGCCGCCGTCGTGGAG--GGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACA 221724 ||| ||| | ||| || | || | | ||||| | ||||| ||| || Sbjct 49222 -------GTCTTGGCGACGGGGTCGATGAAGGTGGGGAGGGCGATCGAGGCCAAGTTGCA 49170 Query 221725 CACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTT 221784 || ||||||||||| | | | |||| || ||||| || || | |||| |||||| Sbjct 49169 GACAGCCACCTCGTCGGGGGCGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGCACTT 49110 Query 221785 GATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAA 221844 |||||| || |||| || || || |||||| || || || ||||||||||| || || Sbjct 49109 GATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGATGAA 49050 Query 221845 GGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGCGCTC-A 221903 ||| ||| ||||| ||| | | | || || || |||||| | ||||| || | Sbjct 49049 GGGGTTGCCGGTCTCGGTCTGCGACTCGAGGATGGCGTACCAGAGCT-TCTGGGCCTTGA 48991 Query 221904 CCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTT 221963 | || | |||| | ||||||| || | | || ||||| ||||||| | Sbjct 48990 CGGTGCGCTTGGCACGGCCCTCGGCCTCGTAGCGCTCG---TAGAGGCGCTCAAACTCGT 48934 Query 221964 CACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCTTGT 222023 | ||||| || | ||||| || ||| | ||| ||||| || ||||| || Sbjct 48933 CGCCGTAGCAGTCAGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGT 48874 Query 222024 TGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGG 222083 | | | |||||||| ||||||||| || || | ||| || || | ||||| |||| || Sbjct 48873 TCTGCTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTCGGG 48814 Query 222084 TCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGT 222143 ||| ||||||| ||||| ||| || | || || | |||||||| | ||| | || Sbjct 48813 CACGCACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAGACGTCCGAGT 48754 Query 222144 GCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCA 222203 |||| ||||| | || | ||| | || ||||| ||||||||||||||||| || || Sbjct 48753 GCCATGGCTCAACGTAAATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGT 48694 Query 222204 TCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGG 222263 | | |||||||| ||| || | || || | |||||| |||||||| Sbjct 48693 AGCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGCACGATACCGTTGCTGACACCGTTGG 48634 Query 222264 TGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAG-ACATGCCGATACCACCG 222322 | || |||||| | |||| | | | | | | ||| | | ||||||||||||| Sbjct 48633 TACCGGCAATGTAGGAACCGGTGCCGCGGATG-CAGTGGATGTTGAGGCCGATACCACCG 48575 Query 222323 GCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCC 222382 ||| || ||||||||||| || ||||||| ||||| |||||| || || ||||| Sbjct 48574 GCGGTCTTGGAGATCATGGCACACGTCTTGAGCGTGTCGTAGATGCCATCGATCGAGTCG 48515 Query 222383 TCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAAC 222442 ||||| | | | | || || || ||||| | ||||| | | || || ||||| || Sbjct 48514 TCCTTCATGGTGACGAGGAAGCACGACGAGAGCTGAGGGTGCGGGGTACCTGCGTTGAAG 48455 Query 222443 AGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACGACT 222502 || ||||| ||||||||||||||| ||||| || | ||| ||||| | | | Sbjct 48454 AGGGTGGGGGAGGCGTGTGTAAAGTACTTTTGCGACATGAGGTTGTAGGTCTCAATGGCG 48395 Query 222503 CTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTC 222562 || |||||| | ||||| || | |||| | |||| ||||| |||||| | | Sbjct 48394 CTCTCGATGTCCTGGCCGTGGATACCGACGGCGACACGCATGAGCATGTGCTGGGGACGC 48335 Query 222563 TCCACAGGACCCT--TGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAA 222620 || | |||| | | | || ||| ||||| || || || |||||||| || | Sbjct 48334 TCTGC--GACCTTGCCGTTGATGCGGAGGAGGTAGGAGCGCTCGAGCGTCTTGAAGCCGA 48277 Query 222621 AGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGCTCCGACTTGTGCT 222680 || ||||| || ||||| | ||| | | ||| | ||| |||| |||||||| Sbjct 48276 AGAAGTTGTAGTGGAAGTCGCGCTCGTAGATGATGGCCGAGTCGAGCTGGTCCTTGTGCT 48217 Score = 89.7 bits (98), Expect = 1e-12 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||||||||| ||||| || || | |||||| | | | ||| | ||| || ||| | || Sbjct 49757 GTTCACCACCTGGAACTCACCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGG 49698 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 |||| || ||||||| ||| ||||||||| || ||||||||||||||| || | Sbjct 49697 CTCGAAGCACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAG 49638 Query 221236 CAGCAGACTGTTGCGCAGTCCG 221257 ||| || ||||||||| ||| Sbjct 49637 CAGAAGCGAGTTGCGCAGACCG 49616 >seq9 Length=823499 Score = 205 bits (226), Expect = 2e-47 Identities = 441/655 (67%), Gaps = 22/655 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||| ||||| | || |||||||||||||||||| || || Sbjct 594438 ATCTGGCAAATGTACAAAAAGGCCGAGGCTTCCTTCTGGACCGCCGAAGAGATCGACCTT 594379 Query 25537 GCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 ||||||| | ||| |||| || |||| | | | |||| | || ||| || Sbjct 594378 TCCAAGGATCTCCACGACTGGGACAACAAGCTCAA--CGACAACGAACGCCACTTTATCT 594321 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 | |||| | || ||||| || || || || ||||| || |||||||| || |||| Sbjct 594320 CGCACGTCCTCGCCTTCTTCGCCGCTTCCGACGGTATCGTCAACGAGAACCTCGTCGAGC 594261 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 | |||| | || ||||| || ||||| || ||||||||||||||||| | Sbjct 594260 GTTTCAGCTCCGAGGTGCAAGCCGCCGAGGCTCGTTGCTTCTACGGTTTCCAGATCATGA 594201 Query 25712 TCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACG 25768 | || || | ||||| ||| || | ||| || || || |||||| || Sbjct 594200 TGGAGAACATCCACTCGGAGACCTACTC---GCTCCTCATCGACACCTACATTCGCGAGC 594144 Query 25769 TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGG 25828 || || | || | || |||| ||| ||||| ||| ||| | ||||| ||| | Sbjct 594143 CCGAGCAGCGCGAGCTCCTCTTTGACGCCGTCGAGACCATCCCCGTCGTCAAGCAGAAAG 594084 Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAG 25888 | ||||| || ||||||| | | || |||| || || | |||||| || || | Sbjct 594083 CCGACTGGGCGCTGCGATGGATCAGCGACAAGCGCGCCACTTTCGCCGAGCGTCTCGTCG 594024 Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCA 25948 ||||||| || || || |||||||| ||| ||| || || || ||||||||||||||| Sbjct 594023 CCTTTGCCGCCGTTGAAGGCATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGCTCA 593964 Query 25949 AGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGG 26008 || || || ||||||||| || ||| ||||||||||||||| | ||||| | Sbjct 593963 AGAAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGAAG 593904 Query 26009 GTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTC 26068 |||| |||| || ||||||||||| |||| || ||||| ||| | || | | | | Sbjct 593903 GTCTGCACACCGACTTTGCCTGCCTCCTCTTCA---GCCAC---CTCAAGAAGCGTGCAC 593850 Query 26069 A---AGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTT 26120 | || ||||| || ||||||| | || || || |||||| |||||| Sbjct 593849 ACCCGGACACCGTGCTCAAAATCATCACCCAAGCCGTCGACATCGAGGTGGAGTT 593795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843998871360