Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq19 170 2e-37
seq9 93.3 5e-14
seq13 84.2 3e-11
>seq19
Length=568126
Score = 170 bits (188), Expect = 2e-37
Identities = 563/865 (65%), Gaps = 19/865 (2%)
Strand=Plus/Plus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||| ||||| ||||||| ||||| |||| |||||||| | ||||| || | |
Sbjct 48339 CCCCAGCACATGCTCATGCGTGTCGCCGTCGGTATCCACGGCCAGGACATCGAGAGCGCC 48398
Query 75272 TTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCTT 75330
| ||||| ||| || ||||| ||| ||| || | ||||| | || ||||||||
Sbjct 48399 ATTGAGACCTACAACCTCATGTCGCAAAAGTACTTT-ACACACGCCTCCCCCACCCTCTT 48457
Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390
||| || ||||| || || ||| | || |||||||| || ||| ||||| ||
Sbjct 48458 CAACGCAGGTACCCCGCACCCTCAGCTCTCGTCGTGCTTCCTCGTCACCATGAAGGACGA 48517
Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450
||| ||| | || ||||| | || || | | |||||| ||||| ||| || ||
Sbjct 48518 CTCGATCGATGGCATCTACGACACGCTCAAGACGTGTGCCATGATCTCCAAGACCGCCGG 48577
Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510
||||| || | ||||||| | | | || || ||| || || ||
Sbjct 48578 TGGTATCGGCCTCAACATCCACTGCATCCGCGGCACCGGTTCCTACATTGCCGGTACCAA 48637
Query 75511 TGGTCAATCAG--ATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568
||| |||| | ||||| | || ||||| ||||| || ||| ||| || |||||
Sbjct 48638 CGGTG--TCAGCAACGGTATCGTGCCCATGCTCCGCGTCTTCAACAACACCGCCCGCTAC 48695
Query 75569 GTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622
|| | || | || ||||| | || || | || | ||| | || ||||||
Sbjct 48696 GTCGACCAGGGTGGCAACAAGCGTCCC---GGTGCCTTTGCCATTTACGTTGAGCCATGG 48752
Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682
|| | || || | |||||||| || | || ||||| || | || |||| ||
Sbjct 48753 CACTCGGACGTCTTTGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTGCGT 48812
Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742
|||| ||||| | | || ||| | || || || ||||||||| |||| ||| ||
Sbjct 48813 GCCCGAGAGCTCTTCTACGCACTCTGGGTGCCCGATCTCTTCATGAAGAGGGTCGAGCAG 48872
Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGT 75802
|| | ||||| || | || || || || || || ||| | ||| ||
Sbjct 48873 AACGGCGACTGGTCGCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCTGACTGCTACGGC 48932
Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCG-ACTGT 75861
|| |||||||| ||||||| || || | ||||| | ||||| ||| || ||
Sbjct 48933 GACGAGTTTGAGCGCCTCTACGAGCGCTACGAGGCCGAGGGCCGTGCCAA-GCGCACCGT 48991
Query 75862 ACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCAT 75920
| || | | || | | ||| | || || ||| | || ||||| ||||| || | || |
Sbjct 48992 -CAAGGCCCAGAAGCTCTGGTACGCCATCCTCGAGTCGCAGACCGAGACCGGCAACCCCT 49050
Query 75921 ATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCA 75980
|| || ||||||||||| |||| ||||| ||||| ||||| | || || ||||
Sbjct 49051 TCATCCTCTACAAGGATGCCGCTAACCGCAAGAGCAACCAGAAGAACCTCGGCACCATCA 49110
Query 75981 AGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTT 76040
|| |||| || | ||||| || ||| | ||||||| | || ||| |||||| |
Sbjct 49111 AGTGCTCCAACTTGTGCACCGAGATTATCGAGTACAGCGCCCCCGACGAGGTGGCTGTCT 49170
Query 76041 GCAATTTGGCATCAATCGCCCTTCC 76065
|||| ||||| || |||||||| ||
Sbjct 49171 GCAACTTGGCCTCGATCGCCCTCCC 49195
>seq9
Length=823499
Score = 93.3 bits (102), Expect = 5e-14
Identities = 116/159 (73%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 65071 TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTC 65130
||||||||||| || | || ||||| || || || |||||||||||||| || |||
Sbjct 594042 TTCGCCGAGCGTCTCGTCGCCTTTGCCGCCGTTGAAGGCATCTTCTTCTCCGGCTCCTTC 593983
Query 65131 TGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAA 65190
| | || | ||| | |||||||| ||||||||||| || || |||||| || ||
Sbjct 593982 GCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAACGAG 593923
Query 65191 CTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCC 65229
|| || || || || || ||||| ||| || ||||||
Sbjct 593922 CTCATCTCGCGCGACGAAGGTCTGCACACCGACTTTGCC 593884
>seq13
Length=657001
Score = 84.2 bits (92), Expect = 3e-11
Identities = 255/390 (65%), Gaps = 18/390 (5%)
Strand=Plus/Plus
Query 13514 CTCAAGAAGACCGATGGTGCTCGCAAGT---CCAAAATTACCGGTATTCCCAAGTTGGAT 13570
|||||||||||||| ||| | |||| ||| || ||| || |||||| | ||
Sbjct 372574 CTCAAGAAGACCGACGGT---CACAAGCGAACCAGGATCACCAACATCCCCAAGCTCGAG 372630
Query 13571 GACGCGAACAAGGCGGGTACGGCACAATCTGGAAAG--TGTACTCTCATTGTCACAGAGG 13628
|| || ||||| || ||| |||| | || | || || ||||| |||| || |
Sbjct 372631 GATGCCAACAATGCCGGT--GGCAGGAAAGCCAAGGACTGCACGCTCATCCTCACCGAAG 372688
Query 13629 GTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCTCTGTCGTTGGTCGTGATCACTACG 13688
|||| ||||| || | ||||| || || ||| || | || || | || ||||||
Sbjct 372689 GTGACTCGGCCAAGTCGCTCGCCGTCGCTGGTATCGTCGAGGTCGGAAGAGACAACTACG 372748
Query 13689 GTGTGTTCCCACTTCGCGGTAAATGTAAGAATGTTCGGGACGCTTCGGTGGCACAGCTCA 13748
|||||||||| || || ||||| ||| || || || || || | ||| |||
Sbjct 372749 GTGTGTTCCCGCTCCGTGGTAAGCTCTTGAACGTCCGTGAAGCCTCTCACGATCAGATCA 372808
Query 13749 CATCAAACCAGGAGTTCAACGATCTCAAGAAGATCCTTGGTCTTCAACAAGGAAAAGACT 13808
||| ||| |||| | ||||| ||||| | ||||| || || || || | |
Sbjct 372809 TGAAGAACGCCGAGATCAAGGCCATCAAGGAGATCTTGGGTCTGCAGCACGGCAAGCAGT 372868
Query 13809 ACCAAGATGTTTCTGAA----CTTCGCTATGGTCGTCTTATGATTATGACAGATGCCGAT 13864
| | || | |||| || || || || | | ||| | ||||| ||| |||
Sbjct 372869 ATCTTGACG----TGAACAGTCTGCGATACGGCAGCATCATGGTCATGACCGATCAGGAT 372924
Query 13865 AATGATGGTTCTCACATCAAGGGTCTCATC 13894
| || ||||| ||||||||||||||||||
Sbjct 372925 CACGACGGTTCGCACATCAAGGGTCTCATC 372954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569085458720
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