Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq19 170 2e-37 seq9 93.3 5e-14 seq13 84.2 3e-11 >seq19 Length=568126 Score = 170 bits (188), Expect = 2e-37 Identities = 563/865 (65%), Gaps = 19/865 (2%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||||| ||||| |||| |||||||| | ||||| || | | Sbjct 48339 CCCCAGCACATGCTCATGCGTGTCGCCGTCGGTATCCACGGCCAGGACATCGAGAGCGCC 48398 Query 75272 TTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| || ||||| ||| ||| || | ||||| | || |||||||| Sbjct 48399 ATTGAGACCTACAACCTCATGTCGCAAAAGTACTTT-ACACACGCCTCCCCCACCCTCTT 48457 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| || ||||| || || ||| | || |||||||| || ||| ||||| || Sbjct 48458 CAACGCAGGTACCCCGCACCCTCAGCTCTCGTCGTGCTTCCTCGTCACCATGAAGGACGA 48517 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 ||| ||| | || ||||| | || || | | |||||| ||||| ||| || || Sbjct 48518 CTCGATCGATGGCATCTACGACACGCTCAAGACGTGTGCCATGATCTCCAAGACCGCCGG 48577 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 ||||| || | ||||||| | | | || || ||| || || || Sbjct 48578 TGGTATCGGCCTCAACATCCACTGCATCCGCGGCACCGGTTCCTACATTGCCGGTACCAA 48637 Query 75511 TGGTCAATCAG--ATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 ||| |||| | ||||| | || ||||| ||||| || ||| ||| || ||||| Sbjct 48638 CGGTG--TCAGCAACGGTATCGTGCCCATGCTCCGCGTCTTCAACAACACCGCCCGCTAC 48695 Query 75569 GTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622 || | || | || ||||| | || || | || | ||| | || |||||| Sbjct 48696 GTCGACCAGGGTGGCAACAAGCGTCCC---GGTGCCTTTGCCATTTACGTTGAGCCATGG 48752 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 || | || || | |||||||| || | || ||||| || | || |||| || Sbjct 48753 CACTCGGACGTCTTTGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTGCGT 48812 Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 |||| ||||| | | || ||| | || || || ||||||||| |||| ||| || Sbjct 48813 GCCCGAGAGCTCTTCTACGCACTCTGGGTGCCCGATCTCTTCATGAAGAGGGTCGAGCAG 48872 Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGT 75802 || | ||||| || | || || || || || || ||| | ||| || Sbjct 48873 AACGGCGACTGGTCGCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCTGACTGCTACGGC 48932 Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCG-ACTGT 75861 || |||||||| ||||||| || || | ||||| | ||||| ||| || || Sbjct 48933 GACGAGTTTGAGCGCCTCTACGAGCGCTACGAGGCCGAGGGCCGTGCCAA-GCGCACCGT 48991 Query 75862 ACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCAT 75920 | || | | || | | ||| | || || ||| | || ||||| ||||| || | || | Sbjct 48992 -CAAGGCCCAGAAGCTCTGGTACGCCATCCTCGAGTCGCAGACCGAGACCGGCAACCCCT 49050 Query 75921 ATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCA 75980 || || ||||||||||| |||| ||||| ||||| ||||| | || || |||| Sbjct 49051 TCATCCTCTACAAGGATGCCGCTAACCGCAAGAGCAACCAGAAGAACCTCGGCACCATCA 49110 Query 75981 AGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTT 76040 || |||| || | ||||| || ||| | ||||||| | || ||| |||||| | Sbjct 49111 AGTGCTCCAACTTGTGCACCGAGATTATCGAGTACAGCGCCCCCGACGAGGTGGCTGTCT 49170 Query 76041 GCAATTTGGCATCAATCGCCCTTCC 76065 |||| ||||| || |||||||| || Sbjct 49171 GCAACTTGGCCTCGATCGCCCTCCC 49195 >seq9 Length=823499 Score = 93.3 bits (102), Expect = 5e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 65071 TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTC 65130 ||||||||||| || | || ||||| || || || |||||||||||||| || ||| Sbjct 594042 TTCGCCGAGCGTCTCGTCGCCTTTGCCGCCGTTGAAGGCATCTTCTTCTCCGGCTCCTTC 593983 Query 65131 TGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAA 65190 | | || | ||| | |||||||| ||||||||||| || || |||||| || || Sbjct 593982 GCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAACGAG 593923 Query 65191 CTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCC 65229 || || || || || || ||||| ||| || |||||| Sbjct 593922 CTCATCTCGCGCGACGAAGGTCTGCACACCGACTTTGCC 593884 >seq13 Length=657001 Score = 84.2 bits (92), Expect = 3e-11 Identities = 255/390 (65%), Gaps = 18/390 (5%) Strand=Plus/Plus Query 13514 CTCAAGAAGACCGATGGTGCTCGCAAGT---CCAAAATTACCGGTATTCCCAAGTTGGAT 13570 |||||||||||||| ||| | |||| ||| || ||| || |||||| | || Sbjct 372574 CTCAAGAAGACCGACGGT---CACAAGCGAACCAGGATCACCAACATCCCCAAGCTCGAG 372630 Query 13571 GACGCGAACAAGGCGGGTACGGCACAATCTGGAAAG--TGTACTCTCATTGTCACAGAGG 13628 || || ||||| || ||| |||| | || | || || ||||| |||| || | Sbjct 372631 GATGCCAACAATGCCGGT--GGCAGGAAAGCCAAGGACTGCACGCTCATCCTCACCGAAG 372688 Query 13629 GTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCTCTGTCGTTGGTCGTGATCACTACG 13688 |||| ||||| || | ||||| || || ||| || | || || | || |||||| Sbjct 372689 GTGACTCGGCCAAGTCGCTCGCCGTCGCTGGTATCGTCGAGGTCGGAAGAGACAACTACG 372748 Query 13689 GTGTGTTCCCACTTCGCGGTAAATGTAAGAATGTTCGGGACGCTTCGGTGGCACAGCTCA 13748 |||||||||| || || ||||| ||| || || || || || | ||| ||| Sbjct 372749 GTGTGTTCCCGCTCCGTGGTAAGCTCTTGAACGTCCGTGAAGCCTCTCACGATCAGATCA 372808 Query 13749 CATCAAACCAGGAGTTCAACGATCTCAAGAAGATCCTTGGTCTTCAACAAGGAAAAGACT 13808 ||| ||| |||| | ||||| ||||| | ||||| || || || || | | Sbjct 372809 TGAAGAACGCCGAGATCAAGGCCATCAAGGAGATCTTGGGTCTGCAGCACGGCAAGCAGT 372868 Query 13809 ACCAAGATGTTTCTGAA----CTTCGCTATGGTCGTCTTATGATTATGACAGATGCCGAT 13864 | | || | |||| || || || || | | ||| | ||||| ||| ||| Sbjct 372869 ATCTTGACG----TGAACAGTCTGCGATACGGCAGCATCATGGTCATGACCGATCAGGAT 372924 Query 13865 AATGATGGTTCTCACATCAAGGGTCTCATC 13894 | || ||||| |||||||||||||||||| Sbjct 372925 CACGACGGTTCGCACATCAAGGGTCTCATC 372954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569085458720