Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq15 100 8e-16
>seq15
Length=627187
Score = 100 bits (110), Expect = 8e-16
Identities = 240/358 (67%), Gaps = 10/358 (3%)
Strand=Plus/Minus
Query 302491 TCAATTCCGTCATCGCCGTAGGAATACTGAATGATTTTGTTCTTGTTATTTCTTACGGTC 302550
|| || ||||| || ||||||| | |||| |||| ||||| | ||||| |||||
Sbjct 606633 TCGATACCGTCTTCACCGTAGGCAAACTGGATGACGTTGTTGGTCGAATTTCGCACGGTG 606574
Query 302551 ATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCA 302610
|| || | | ||||| ||| || | | |||| ||||||||||| || |||||
Sbjct 606573 CCGTCGTAGCACACCATAACGTCCTCGAGAGCTTTGACCAAACGACGCTGGATGTAACCG 606514
Query 302611 GTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAG 302670
|| | || || || || || || || ||||| | ||||| |||| || ||||||
Sbjct 606513 GTCTCGGCGGTCTTGACGGCCGTGTCGATAAGACCTTCTCGACCGGCCATGGCGTGGAAG 606454
Query 302671 AATAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTC 302729
|| | ||||| | ||| || || | | | ||| |||| || || ||||| |||
Sbjct 606453 AAGAACTCTT-GAGCCGTGAGACCTCGCAGGTACGAGTTCTCGACAAAGCCACGACTCTC 606395
Query 302730 GGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGAT 302789
||| | |||| ||| |||||||| ||||| | | || | || | || ||
Sbjct 606394 GGGGGTGAAGTCGTCCTTAGTAAAGTGAGGCAGACTGCGGTGGCGGAAACCAAAGGGAAT 606335
Query 302790 ACGCTTTCCATCAACGTTCTGCTGTCC----CAGGCACGAAATCATCTGCGAAATATT 302843
|||||| || || ||| ||||||||| ||||| ||| ||||||||| || ||
Sbjct 606334 ACGCTTGCCCTCGACGGACTGCTGTCCGACACAGGC-CGA---CATCTGCGAGATGTT 606281
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816298821253
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |