Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq19 181 1e-40 seq18 122 8e-23 seq11 120 3e-22 >seq19 Length=568126 Score = 181 bits (200), Expect = 1e-40 Identities = 971/1524 (64%), Gaps = 48/1524 (3%) Strand=Plus/Minus Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567 ||||| || |||||||| | || ||||| ||| |||||| ||| ||||||| || Sbjct 49750 ACCTGGAACTCACCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGCTCGAAG 49691 Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627 | |||||| || || |||||| || | ||||| |||||| || | || ||| Sbjct 49690 CACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGCAGAAGC 49631 Query 138628 GAATTCCGTAAACCGTGAAGCTTGAT--TCGTT-CCTTGAGCGACGACCAGTCCCACAAA 138684 || || || | |||||| |||| || | |||||||| | ||||||||| | Sbjct 49630 GAGTTGCGCAGACCGTG---CTTGGCGATCTTGGCCTTGAGCTCGGCCCAGTCCCAGAGG 49574 Query 138685 TCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCT 138744 || || | | |||||| |||||||| | | ||| ||||| ||| Sbjct 49573 TCCGAGGGGGTGACGCCCCACATGTCGTACTGCAGCTCACCCTGCGAAGCGGGCGAGCCG 49514 Query 138745 TCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTT-GCTCGCCTCGAGCGCACC 138803 |||| | ||||| || || || |||| |||| | |||| ||||| || | Sbjct 49513 GCGTAGGTCTCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCACGATCGC-TCGAGAGCGGC 49455 Query 138804 ATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGG 138863 | ||| || || ||| || ||| ||||| || ||||||| ||| | || Sbjct 49454 GTGGTAGATGGTCTCGAAGATATGCACGTTGAGACGACGAGCCTCGGGAGACTCAAA-GG 49396 Query 138864 CAT-GCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGAT 138922 | | || | ||| |||| |||||||| || || || || || | |||| || || | Sbjct 49395 CGTAGCCCATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATGGGACGGT 49336 Query 138923 GGCGCAGATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTGT 138982 |||||| || || || | |||| || || ||||| | |||||||| |||| Sbjct 49335 GGCGCATGTTGGATCGACGGGCCTCCTCGACGGGGTAGTAGTTGATGTCGATGATCTTGT 49276 Query 138983 TTAAATT-TCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCC 139041 | | || | ||| || |||| | | | | |||| || ||||| || Sbjct 49275 TAAGGTTCTTGCA-GATGGCCTTGGCGACCTCGTGCAGACGTTTGAAGTCGTACGTC--- 49220 Query 139042 CCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACC 139101 | | ||||| ||||| || || || |||||||| | |||||| || Sbjct 49219 ------TTGGCGACGGGGTCGATGAAGGTGGGGAGGGCGATCGAGGCCAAGTTGCAGACA 49166 Query 139102 GCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATC 139161 ||||| ||||||||| ||||||| |||| ||| |||| ||||| || |||||||| Sbjct 49165 GCCACCTCGTCGGGGGCGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGCACTTGATG 49106 Query 139162 GTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGT 139221 || || | || | || ||||| || |||||| ||||| ||||| || || | || Sbjct 49105 GTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGATGAAGGGG 49046 Query 139222 GTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACA-AGTCCCTAG--CTTGTATT 139278 |||| || || || | ||| | ||| | | || || || | |||| Sbjct 49045 TTGCCGGTCTCGGTCTGCGACTCGAGGATGGCGT--ACCAGAGCTTCTGGGCCTTGACGG 48988 Query 139279 TGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAA-TCGTTCACC 139337 || ||| | | | | ||| |||||| |||||||| || || |||| | || Sbjct 48987 TG-CGCTTGGCACGGCCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCAAACTCGT-CGCC 48930 Query 139338 GTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGC 139397 |||| ||||| || || | |||| || || |||||||||||||| |||||||| Sbjct 48929 GTAGCAGTCAGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGTTCTG 48870 Query 139398 CTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTT 139457 || ||| | | ||||||| ||||| || | ||| | ||| | | | || || || Sbjct 48869 CTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTCGGGCACG 48810 Query 139458 CTTATCTTCCGAACCCATGTTACGTTTC--ATGTTAAGGAAATCAAAAACGTCAGCGTGC 139515 | || ||| || ||| || | | || ||||| ||||| ||||| | |||| Sbjct 48809 CACCTCCTCCTTGCCGTGGTTC--TTGCGGAGGTCGAGGAACTCAAAGACGTCCGAGTGC 48752 Query 139516 CATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCGACGTGT 139572 ||||| || | || ||||| | || || || ||| ||||| || ||||||| Sbjct 48751 CATGGCTCAACGTAAATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTAG 48692 Query 139573 CGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTT-CCGTTGGT 139631 || | | || ||||| ||||| | ||| ||| | | |||| | |||| |||||||| Sbjct 48691 CGGGCGGTGTTGTTGAAGACGCGGAGCATGGGCACGATACCGTT-GCTGACACCGTTGGT 48633 Query 139632 ----GCTACGGATGGGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATTCCGC 139687 || | | | || || | ||| | |||| | || | |||| |||||| || | Sbjct 48632 ACCGGCAATGTA-GGAACCGGTGC---CGCGGATGCAGTGGATGTTGAGGCCGATACCAC 48577 Query 139688 CGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTCTCGTATATACCTCTTATGCTG 139746 || | ||||| || | | || || | | || ||||| || || || | Sbjct 48576 CGGCGGTCTTGGAGATCATGGCACACGTCTTG-AGCGTGTCGTAGATGCCATCGATCGAG 48518 Query 139747 TCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCA 139806 ||||||| ||| ||||| || ||||| ||||| || || || | || || || Sbjct 48517 TCGTCCTTCATGGTGACGAGGAAGCACGACGAGAGCTGAGGGTGCGGGGTACCTGCGTTG 48458 Query 139807 AACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATG 139866 || || || || ||||| || || | || |||||| | | ||| || || ||| Sbjct 48457 AAGAGGGTGGGGGAGGCGTGTGTAAAGTACTTTTGCGACATGAGGTTGTAGGTCTCAATG 48398 Query 139867 GCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATC 139926 |||||| | || ||| |||||||||||||| | ||| ||||| ||||| || ||| Sbjct 48397 GCGCTCTCGATGTCCTGGCCGTGGATACCGACGGCGACACGCATGAGCATGTGCTGGGGA 48338 Query 139927 CGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTTGTAGCCA 139986 || || || ||| ||| | ||| || || | ||| || |||||| |||| Sbjct 48337 CGCTCTGCGACCTTGCCGTTGATGCGGAGGAGGTAGGAGCGCTCGAGCGTCTTGAAGCCG 48278 Query 139987 AAGTACCTATAGTTGAAATCGAGC 140010 ||| | | |||| ||| ||| || Sbjct 48277 AAGAAGTTGTAGTGGAAGTCGCGC 48254 >seq18 Length=577775 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || ||||| || || || || ||||| || || || | Sbjct 203609 ATGCAGATCTTTGTCAAGACTCTGACCGGCAAGACCATCACTCTCGAGGTCGAGTCCTCT 203550 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| ||||| || || |||||||| Sbjct 203549 GACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCACCCGATCAG 203490 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | || |||||||| || ||||| || || | | | | || || || || Sbjct 203489 CAGCGGCTTATTTTTGCCGGCAAGCAGCTTGAAGACGGCCGTACCCTTTCCGACTACAAT 203430 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| ||||| || |||||||| ||||| | || ||||| Sbjct 203429 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGCGTCTCCGTGGAGG 203383 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| |||| || || ||||| || || || || ||||| || || || | Sbjct 203838 GATGCAGATCTTTGTTAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTC 203779 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||||||||| ||||| || || |||||||| Sbjct 203778 TGACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCACCCGATCA 203719 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || | |||||||| || || ||||| ||||| | | | || || || || Sbjct 203718 GCAGCGACTTATCTTTGCAGGAAAGCAGCTCGAGGACGGCCGCACTCTTTCCGACTACAA 203659 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||||||||| || ||| | || | || | ||||| || Sbjct 203658 CATCCAGAAGGAATCGACTCTCCACCTCGTCCTCCGTCTTCGCGGGGG 203611 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| |||| || || || ||||| || || || ||||| || || | | Sbjct 283670 GATGCAGATCTTCGTTAAGACCCTCACGGGTAAGACCATCACTCTCGAGGTCGAGTCTTC 283611 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||| ||||| || || || || ||||| || Sbjct 283610 GGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCA 283551 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA---TGTCAGATTA 24879 || || ||||||| || || || ||||| ||||| || | ||| | || || || Sbjct 283550 GCAGCGCCTGATCTTCGCTGGTAAGCAGCTTGAGGA--CG-GCCACACCCTTTCGGACTA 283494 Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || ||||| ||||| || ||||||||| | || |||| || || Sbjct 283493 CAACATCCAGAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTGCGTGGTGG 283443 >seq11 Length=758843 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || |||||||| || || || ||||| || || | || Sbjct 158696 ATGCAGATCTTTGTCAAGACTCTGACCGGTAAGACGATCACCCTCGAGGTGGAGTCTTCC 158637 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| |||||||| || || || || || ||||| Sbjct 158636 GACACTATCGACAACGTCAAGGCCAAGATTCAAGACAAGGAGGGTATCCCACCTGATCAG 158577 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||||||||| || ||||| ||||| | | | | || ||||| ||| Sbjct 158576 CAGCGTCTCATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGCACCCTTTCCGATTACAAC 158517 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| ||||| || ||| |||| Sbjct 158516 ATCCAGAAGGAGTCGACCCTCCACCTGGT 158488 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || ||||| || || || || ||||||||||| || || || | Sbjct 158240 ATGCAAATCTTTGTCAAGACGCTCACGGGCAAGACCATTACGCTCGATGTCGAGTCCTCG 158181 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| ||||| || || || |||||||| || Sbjct 158180 GATACTATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAG 158121 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||| || || |||||||||||| | | | || || || ||| Sbjct 158120 CAGCGCTTGATCTTTGCTGGTAAGCAGCTGGAGGATGGTCGCACTCTTTCGGACTACAAC 158061 Query 24884 ATTCAAAAGGA 24894 ||||| ||||| Sbjct 158060 ATTCAGAAGGA 158050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897211963320