Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq9 221 2e-51 seq19 190 3e-42 seq2 141 1e-27 seq15 140 5e-27 seq6 116 6e-20 seq18 89.7 8e-12 >seq9 Length=823499 Score = 221 bits (244), Expect = 2e-51 Identities = 248/330 (75%), Gaps = 9/330 (3%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 |||||||||||| ||| | |||||| ||| ||| ||||||||||| |||||||| Sbjct 593902 ACCTTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCGCGCTT 593961 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||| ||||||| ||| ||| ||||| |||||||| || ||||||||||| Sbjct 593962 CTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGATGCCTTCAACGGCGGCAAA 594021 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | ||||||| |||||||| |||||| | || || | | ||||||| || |||||| Sbjct 594022 GGCGACGAGACGCTCGGCGAAAGTGGC---GCGCTTGTCGCTGATCCATCGCAGCGCCCA 594078 Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTC---CTT 794576 || || || | | | || ||| | || |||| |||| ||||||| | || || Sbjct 594079 GTCGGCTTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTCAAAGAGGAGCTCGCGCTG 594138 Query 794577 CTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTT 794636 |||| || || | |||||||||||||||||||||||||||||| ||||||||||| Sbjct 594139 CTCG---GGCTCGCGAATGTAGGTGTCGATGAGGAGCGAGTAGGTCTCCGAGTGGATGTT 594195 Query 794637 TTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 || || ||||||||| || || ||||| Sbjct 594196 CTCCATCATGATCTGGAAACCGTAGAAGCA 594225 Score = 131 bits (144), Expect = 3e-24 Identities = 160/217 (74%), Gaps = 11/217 (5%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||||| |||| ||||| |||| || || | |||||||| ||||| ||| Sbjct 594230 GCCTCGGCGGCTTGCACCTCGGAGCTGAAACGCTCGACGAGGTTCTCGTTGACGATACCG 594289 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 ||| |||||||| ||||||||||||||| ||||||||| || |||| |||| ||||| Sbjct 594290 TCGGAAGCGGCGAAGAAGGCGAGGACGTGCGAGATAAAGTGGCGTTCGTTGTCGTTGAGC 594349 Query 796270 ---GAGACCCAGTGGACCGTG----TCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAA 796322 | |||||| |||| || | ||||||| ||| ||||||||||| || Sbjct 594350 TTGTTGTCCCAGT----CGTGGAGATCCTTGGAAAGGTCGATCTCTTCGGCGGTCCAGAA 594405 Query 796323 GGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGT 796359 ||| |||||||||||||||||||| | ||| ||| || Sbjct 594406 GGAAGCCTCGGCCTTTTTGTACATTTGCCAGATCTGT 594442 >seq19 Length=568126 Score = 190 bits (210), Expect = 3e-42 Identities = 345/505 (68%), Gaps = 15/505 (3%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||| ||||| || |||| ||| |||||||||||||||||||| | |||||| Sbjct 48704 CTGGTCGACGTAGCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGCACGATACCGTTGCT 48645 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 | |||||||| || || | ||||| || | | |||| | ||| | | ||| Sbjct 48644 GACACCGTTGGTACCGGCAATGTAGGAACCGGTGCCGCGGATGCAGTGGATGTTGAGGCC 48585 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 ||| || ||||| | ||||||||| | || ||| | || ||||| ||||||||||| || Sbjct 48584 GATACCACCGGCGGTCTTGGAGATCATGGCACACGTCTTGAGCGTGTCGTAGATGCCATC 48525 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 |||||||||| |||||||| | || |||||||||||| || ||| ||| || || Sbjct 48524 GATCGAGTCGTCCTTCATGGTGACGAGGAAGCACGACGAGAGCTGAGGGTGCGGGGTACC 48465 Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839 || |||||||| ||||| | || || | ||| ||| |||||| | |||||| Sbjct 48464 TGCGTTGAAGAGGGTGGGGGAGGCGTGTGTAAAGTACTTTTGCGACATGAGGTTGTAGGT 48405 Query 2073840 GGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGCGAC 2073899 | | ||| | | | ||| ||| ||| | ||| |||| |||||| Sbjct 48404 CTCAATGGCGCTCTCGA---TGTCCTGGCCGTGG--------ATA----CCGACGGCGAC 48360 Query 2073900 GCGCATGATCATGTACTGGGGTCGCTCGACGACGGCGTCGCGCACCTTGGTCAGGTAGGA 2073959 ||||||| ||||| |||||| ||||| |||| | || | | |||||||| Sbjct 48359 ACGCATGAGCATGTGCTGGGGACGCTCTGCGACCTTGCCGTTGATGCGGAGGAGGTAGGA 48300 Query 2073960 CCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGGATGGC 2074019 || || ||| | ||| ||| | |||| | ||||||||||| | |||||| Sbjct 48299 GCGCTCGAGCGTCTTGAAGCCGAAGAAGTTGTAGTGGAAGTCGCGCTCGTAGATGATGGC 48240 Query 2074020 GGCGTCGAGGGCCTCCTTGTGCGCC 2074044 | |||||| ||||||||| || Sbjct 48239 CGAGTCGAGCTGGTCCTTGTGCTCC 48215 Score = 141 bits (156), Expect = 1e-27 Identities = 285/429 (66%), Gaps = 0/429 (0%) Strand=Plus/Minus Query 2071584 CTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTCTGCTGGTTGCTGGTCAGGTT 2071643 ||||||||||| ||||| || | ||||||| ||||||| ||||||||| | |||| Sbjct 49133 CTCGGTGCACAAGTTGGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTT 49074 Query 2071644 GACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACGATGGC 2071703 |||| ||||||| || ||| |||| || |||||| |||||| | || |||||| Sbjct 49073 AGCGGCATCCTTGTAGAGGATGAAGGGGTTGCCGGTCTCGGTCTGCGACTCGAGGATGGC 49014 Query 2071704 CGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNNNNNNNNNNNNNNNN 2071763 |||| | | | || || | | | | || ||||||| Sbjct 49013 GTACCAGAGCTTCTGGGCCTTGACGGTGCGCTTGGCACGGCCCTCGGCCTCGTAGCGCTC 48954 Query 2071764 NNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGACGGGCA 2071823 ||||| ||||| || |||||| ||| || |||||||| |||| ||||| Sbjct 48953 GTAGAGGCGCTCAAACTCGTCGCCGTAGCAGTCAGCGAGGCCGGGGCACTCGTTGGGGCA 48894 Query 2071824 AAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTCCACAG 2071883 | |||||||||||||||| | | || | ||| || || ||| | ||| || Sbjct 48893 CATGAGCGACCAGTCGCCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAG 48834 Query 2071884 GCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAG 2071943 |||| ||||| || || || || ||||||||||||||||||||| |||||||| Sbjct 48833 TGCGTAGAAGAGCTCTCGGGCACGCACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAG 48774 Query 2071944 CCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTT 2072003 | || | || ||| | |||||| ||||| | ||| ||||||||| || ||||| Sbjct 48773 GAACTCAAAGACGTCCGAGTGCCATGGCTCAACGTAAATGGCAAAGGCACCGGGACGCTT 48714 Query 2072004 GCCGCCGCC 2072012 | ||| || Sbjct 48713 GTTGCCACC 48705 Score = 87.8 bits (96), Expect = 3e-11 Identities = 127/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 2070052 GCCGCATGGTAGATCGTCTCAAAGATGGTGCG-GTTGAGGCGACGCGCGCCGGCGCTCTC 2070110 || || |||||||| ||||| ||||| ||| |||||| ||||| || ||| ||| Sbjct 49459 GCGGCGTGGTAGATGGTCTCGAAGATA-TGCACGTTGAGACGACGAGCCTCGGGAGACTC 49401 Query 2070111 CCACGGCAGGTCCATCATGGCAAACGCGTCGGCCAGGCCCTGCACGCCGACGCCCATCGG 2070170 | | | |||| || || |||||||| || ||||| || |||| || || || Sbjct 49400 AAAGGCGTAGCCCATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATGGG 49341 Query 2070171 CCGGTGGCGCAGGTTCGAGTGCCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGAT 2070227 |||||||||| ||| || | |||||||| || ||||||| |||||||||||| Sbjct 49340 ACGGTGGCGCATGTTGGATCGACGGGCCTCCTCGACGGGGTAGTAGTTGATGTCGAT 49284 >seq2 Length=1573848 Score = 141 bits (156), Expect = 1e-27 Identities = 183/253 (72%), Gaps = 0/253 (0%) Strand=Plus/Minus Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532 |||||||||| | ||||||||| || |||| ||||||| ||| || || ||| | | || Sbjct 193822 ACTTGGTGACCGACTTGGTACCTTCCGAGATGGCGTGCTTGGAGAGCTCACCGGGGAGGA 193763 Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCG 1485592 | ||||| ||||||||||||||||| || | ||| || |||||| | | Sbjct 193762 TGAGGCGGACGGCGGTCTGGATCTCTCGCGACGAGATGGTCGACTTCTTGTTGTAGGAAG 193703 Query 1485593 CCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGA 1485652 | || | |||||| ||| ||||||| |||| ||||| | ||| |||||||| | | Sbjct 193702 CGAGCTTGGAGGCCTCAGTGGCGATGCGCTCGAAGATGTCCTGGACGAACGAGTTGAGAA 193643 Query 1485653 TCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAA 1485712 | | ||| | ||||| ||||| || ||||||||| |||||||||||||| ||| | Sbjct 193642 TGGCCATGGCCTTGTTCGAGATACCAGTGTCGGGGTGGACCTGCTTGAGCACACGGTAGA 193583 Query 1485713 CAAAGGACGAGTA 1485725 ||| |||||| Sbjct 193582 TGTAGGTCGAGTA 193570 >seq15 Length=627187 Score = 140 bits (154), Expect = 5e-27 Identities = 222/314 (71%), Gaps = 6/314 (2%) Strand=Plus/Plus Query 429508 CGCTCCAGATCGGGTGGACCGTCGAGCGCCACCTGCGCACCGGCGACCCCGTGGTCATGA 429567 |||| ||| ||| |||| |||||||||||||| |||||| ||| | | | Sbjct 605283 CGCTGCAGCCCGGCTGGATTGTCGAGCGCCACCTCAAGGATGGCGACTATGTGCTATTCA 605342 Query 429568 ACCGGCAGCCGTCGCTCCACATGGGGTCGATGCTCAACCACAAGGTGGTGCCCATGCCCG 429627 |||| || || ||||| |||| | ||| ||| | |||| | | || |||| | Sbjct 605343 ACCGTCAACCTTCGCTGCACAAGATGTCCATGATGTCGCACAGGATCAAGCTCATGGACT 605402 Query 429628 GTCGCACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCG 429687 ||||||||| |||||||| || ||| | ||||||||||||| || ||||| | Sbjct 605403 ACTCCACCTTCCGTCTCAACCTCAGTGTCACGCCCCCCTACAACGCCGATTTCGACGGTG 605462 Query 429688 ACGAGATGAACCTGCACGTGCCCCAG-TCGGAGATGGCACGCGCCGAAGTCGCCCACA-- 429744 ||||||||||| |||||||||||||| || ||| | | |||||||| || | || | Sbjct 605463 ACGAGATGAACTTGCACGTGCCCCAGAGCGAAGA-GACGCGCGCCGAGCTCTCGCAGATT 605521 Query 429745 CCATGGGCGTGGCCCTCAAGGCCGTGTCGCCGCAGGCCAACAAGCCCATCATCGGGCTCG 429804 ||||| ||| | | || || ||||||||||||||||||||| |||| || ||| Sbjct 605522 GCATGG--GTGCCGCGTCAGATTGTCTCGCCGCAGGCCAACAAGCCCGTCATGGGTATCG 605579 Query 429805 TGATGGACGCCCTC 429818 || |||| | ||| Sbjct 605580 TGCAGGACACGCTC 605593 Score = 107 bits (118), Expect = 3e-17 Identities = 163/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 428995 ACAACGATATCCGCGGCCAAAAGCAGTCGACCCAGCGGTCGGGCAAGCCCACCAAGGGCG 429054 ||||||| || ||| ||| |||| | | ||| | |||| ||||| |||| Sbjct 604926 ACAACGACATTGCCGGTCAACCGCAGGCCATGCAGTCGAGCGGCAGGCCCATCAAGTCGA 604985 Query 429055 TCGTGGAGCGATTCAAGGGCAAGGAGGGCCGGATCCGCGGCAATTGCATGGGCAAGCGCG 429114 || | ||| || ||||| ||||| ||||| ||||||| || | ||||||||||| | Sbjct 604986 TCCGTGCGCGTTTGAAGGGAAAGGAAGGCCGTCTCCGCGGAAACTTGATGGGCAAGCGTG 605045 Query 429115 TCAACTTTACGGCGCGCGCCGTCATCAGTCCCGACCCCGAAATCGACATTGACGAGGTGG 429174 ||||||| |||| || ||||||| | |||||| | |||| | |||||||| | Sbjct 605046 TCAACTTCTCGGCCCGAACCGTCATTACCGGTGACCCCTTACTCGAGCTCGACGAGGTCG 605105 Query 429175 GCGTGCCCTATGAGATCGTCAAGACGCTCACCTTTCCCGAGCGCGTGACGCC 429226 | |||||| | |||| | | ||||||| ||||||||| |||||||| Sbjct 605106 GTGTGCCCAAGTCCATCGCCCGTAACCTCACCTATCCCGAGCGTGTGACGCC 605157 Score = 100 bits (110), Expect = 5e-15 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 431022 CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATG 431081 |||||||| || |||||||| ||||||||| ||| || |||| | | ||| | Sbjct 606392 CCCGAGAGTCGTGGCTTTGTCGAGAACTCGTACCTGCGAGGTCTCACGGCTCAAGAGTTC 606451 Query 431082 TTTCTGCACATGATCGGCGGGCGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGCCGAG 431141 || | ||| || | ||| || || ||||| ||||||||||||||||||| |||||| Sbjct 606452 TTCTTCCACGCCATGGCCGGTCGAGAAGGTCTTATCGACACGGCCGTCAAGACCGCCGAG 606511 Query 431142 ACGGGCTACATCCAGCGTCG 431161 || || |||||||||||||| Sbjct 606512 ACCGGTTACATCCAGCGTCG 606531 >seq6 Length=877045 Score = 116 bits (128), Expect = 6e-20 Identities = 308/465 (66%), Gaps = 4/465 (1%) Strand=Plus/Plus Query 2018913 CTCCCGTGGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCAC 2018972 || || ||| | |||||||| | || | |||||||| | || |||||| || || Sbjct 572669 CTGCCCTGGGTAGAAAAGTATAGGCCCATGCGACTCGACGATGTGGTCGGCAACAAGGAC 572728 Query 2018973 GCCGTTGCCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCG 2019032 || | | | |||||| | | |||||||||| || | || | | || Sbjct 572729 ACCATCGACCGCCTCAAAGTAATTCAGAACGACGGCAACTGTCCGCATCTGCTCATCTCG 572788 Query 2019033 GGCCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGC 2019092 ||| |||||||| ||||| ||||| | |||||| || || | || |||||| Sbjct 572789 GGCTTGCCCGGCATTGGCAAAACCACCTCGGTGCTGTGCCTCGCTCGTGCACTTTTGGGC 572848 Query 2019093 GCGGCCGCCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTC 2019152 | || | | || | |||||||| ||||| || || |||||||| || || || || Sbjct 572849 GATGCGTACAAGGAAGGTGTGCTCGAGCTCAACGCTTCCGACGAGCGAGGTGTCGATGTG 572908 Query 2019153 GTGCGTAGAATCATCAAGCATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCCAC 2019212 ||||| | | |||||| ||| ||| | | || || || || || | ||| Sbjct 572909 GTGCGCAACAAAATCAAGACGTTTGCTCAGAAGAAAGTCTCGCTCCCACCAGGAAGGCAC 572968 Query 2019213 AAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGA 2019272 ||| | ||||||||||| ||||||||| || | ||| | || || |||||||| || || Sbjct 572969 AAGATCATCATCCTCGACGAGGCCGACAGCATGACGCCCGCAGCGCAGCAGGCTCTGCG- 573027 Query 2019273 TCG-ACCATGGAAAAGTACACCAACACGACGCGGTT-TGCGCTGGCCTGCAACACGTCGT 2019330 ||| |||||||| | || ||||||| || || || ||| | || |||||| | Sbjct 573028 TCGAACCATGGAGATTCACTCCAACACCACCCGCTTCTGC-TTCGCTTGCAACCAGAGCA 573086 Query 2019331 CGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCT 2019375 | | ||||||| | | || | | |||||||||||||||| Sbjct 573087 ACAAGATCATCGAGCCGATTCAATCCAGATGCGCCATCTTGCGCT 573131 >seq18 Length=577775 Score = 89.7 bits (98), Expect = 8e-12 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671 |||||||||| | ||||||||| | || ||||| ||||||||||||||||| || | Sbjct 354359 AGGTCGACCAGGAAATGCTCTTTGAGATCATTCTCGCTGCCAACTACCTCGACATTAAAC 354300 Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTG 2035700 ||||||||||| | || |||||||| ||| Sbjct 354299 CCCTCCTCGATGTCGGCTGCAAGACTGTG 354271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916239060155291