Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq9 221 2e-51
seq19 190 3e-42
seq2 141 1e-27
seq15 140 5e-27
seq6 116 6e-20
seq18 89.7 8e-12
>seq9
Length=823499
Score = 221 bits (244), Expect = 2e-51
Identities = 248/330 (75%), Gaps = 9/330 (3%)
Strand=Plus/Plus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
|||||||||||| ||| | |||||| ||| ||| ||||||||||| ||||||||
Sbjct 593902 ACCTTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCGCGCTT 593961
Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459
||||||||| ||||||| ||| ||| ||||| |||||||| || |||||||||||
Sbjct 593962 CTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGATGCCTTCAACGGCGGCAAA 594021
Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519
| ||||||| |||||||| |||||| | || || | | ||||||| || ||||||
Sbjct 594022 GGCGACGAGACGCTCGGCGAAAGTGGC---GCGCTTGTCGCTGATCCATCGCAGCGCCCA 594078
Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTC---CTT 794576
|| || || | | | || ||| | || |||| |||| ||||||| | || ||
Sbjct 594079 GTCGGCTTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTCAAAGAGGAGCTCGCGCTG 594138
Query 794577 CTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTT 794636
|||| || || | |||||||||||||||||||||||||||||| |||||||||||
Sbjct 594139 CTCG---GGCTCGCGAATGTAGGTGTCGATGAGGAGCGAGTAGGTCTCCGAGTGGATGTT 594195
Query 794637 TTCGATGGCGATCTGGAAGCCATAAAAGCA 794666
|| || ||||||||| || || |||||
Sbjct 594196 CTCCATCATGATCTGGAAACCGTAGAAGCA 594225
Score = 131 bits (144), Expect = 3e-24
Identities = 160/217 (74%), Gaps = 11/217 (5%)
Strand=Plus/Plus
Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209
||||||| |||| ||||| |||| || || | |||||||| ||||| |||
Sbjct 594230 GCCTCGGCGGCTTGCACCTCGGAGCTGAAACGCTCGACGAGGTTCTCGTTGACGATACCG 594289
Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269
||| |||||||| ||||||||||||||| ||||||||| || |||| |||| |||||
Sbjct 594290 TCGGAAGCGGCGAAGAAGGCGAGGACGTGCGAGATAAAGTGGCGTTCGTTGTCGTTGAGC 594349
Query 796270 ---GAGACCCAGTGGACCGTG----TCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAA 796322
| |||||| |||| || | ||||||| ||| ||||||||||| ||
Sbjct 594350 TTGTTGTCCCAGT----CGTGGAGATCCTTGGAAAGGTCGATCTCTTCGGCGGTCCAGAA 594405
Query 796323 GGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGT 796359
||| |||||||||||||||||||| | ||| ||| ||
Sbjct 594406 GGAAGCCTCGGCCTTTTTGTACATTTGCCAGATCTGT 594442
>seq19
Length=568126
Score = 190 bits (210), Expect = 3e-42
Identities = 345/505 (68%), Gaps = 15/505 (3%)
Strand=Plus/Minus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
||||||||| ||||| || |||| ||| |||||||||||||||||||| | ||||||
Sbjct 48704 CTGGTCGACGTAGCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGCACGATACCGTTGCT 48645
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
| |||||||| || || | ||||| || | | |||| | ||| | | |||
Sbjct 48644 GACACCGTTGGTACCGGCAATGTAGGAACCGGTGCCGCGGATGCAGTGGATGTTGAGGCC 48585
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
||| || ||||| | ||||||||| | || ||| | || ||||| ||||||||||| ||
Sbjct 48584 GATACCACCGGCGGTCTTGGAGATCATGGCACACGTCTTGAGCGTGTCGTAGATGCCATC 48525
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
|||||||||| |||||||| | || |||||||||||| || ||| ||| || ||
Sbjct 48524 GATCGAGTCGTCCTTCATGGTGACGAGGAAGCACGACGAGAGCTGAGGGTGCGGGGTACC 48465
Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839
|| |||||||| ||||| | || || | ||| ||| |||||| | ||||||
Sbjct 48464 TGCGTTGAAGAGGGTGGGGGAGGCGTGTGTAAAGTACTTTTGCGACATGAGGTTGTAGGT 48405
Query 2073840 GGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGCGAC 2073899
| | ||| | | | ||| ||| ||| | ||| |||| ||||||
Sbjct 48404 CTCAATGGCGCTCTCGA---TGTCCTGGCCGTGG--------ATA----CCGACGGCGAC 48360
Query 2073900 GCGCATGATCATGTACTGGGGTCGCTCGACGACGGCGTCGCGCACCTTGGTCAGGTAGGA 2073959
||||||| ||||| |||||| ||||| |||| | || | | ||||||||
Sbjct 48359 ACGCATGAGCATGTGCTGGGGACGCTCTGCGACCTTGCCGTTGATGCGGAGGAGGTAGGA 48300
Query 2073960 CCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGGATGGC 2074019
|| || ||| | ||| ||| | |||| | ||||||||||| | ||||||
Sbjct 48299 GCGCTCGAGCGTCTTGAAGCCGAAGAAGTTGTAGTGGAAGTCGCGCTCGTAGATGATGGC 48240
Query 2074020 GGCGTCGAGGGCCTCCTTGTGCGCC 2074044
| |||||| ||||||||| ||
Sbjct 48239 CGAGTCGAGCTGGTCCTTGTGCTCC 48215
Score = 141 bits (156), Expect = 1e-27
Identities = 285/429 (66%), Gaps = 0/429 (0%)
Strand=Plus/Minus
Query 2071584 CTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTCTGCTGGTTGCTGGTCAGGTT 2071643
||||||||||| ||||| || | ||||||| ||||||| ||||||||| | ||||
Sbjct 49133 CTCGGTGCACAAGTTGGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTT 49074
Query 2071644 GACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACGATGGC 2071703
|||| ||||||| || ||| |||| || |||||| |||||| | || ||||||
Sbjct 49073 AGCGGCATCCTTGTAGAGGATGAAGGGGTTGCCGGTCTCGGTCTGCGACTCGAGGATGGC 49014
Query 2071704 CGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNNNNNNNNNNNNNNNN 2071763
|||| | | | || || | | | | || |||||||
Sbjct 49013 GTACCAGAGCTTCTGGGCCTTGACGGTGCGCTTGGCACGGCCCTCGGCCTCGTAGCGCTC 48954
Query 2071764 NNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGACGGGCA 2071823
||||| ||||| || |||||| ||| || |||||||| |||| |||||
Sbjct 48953 GTAGAGGCGCTCAAACTCGTCGCCGTAGCAGTCAGCGAGGCCGGGGCACTCGTTGGGGCA 48894
Query 2071824 AAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTCCACAG 2071883
| |||||||||||||||| | | || | ||| || || ||| | ||| ||
Sbjct 48893 CATGAGCGACCAGTCGCCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAG 48834
Query 2071884 GCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAG 2071943
|||| ||||| || || || || ||||||||||||||||||||| ||||||||
Sbjct 48833 TGCGTAGAAGAGCTCTCGGGCACGCACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAG 48774
Query 2071944 CCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTT 2072003
| || | || ||| | |||||| ||||| | ||| ||||||||| || |||||
Sbjct 48773 GAACTCAAAGACGTCCGAGTGCCATGGCTCAACGTAAATGGCAAAGGCACCGGGACGCTT 48714
Query 2072004 GCCGCCGCC 2072012
| ||| ||
Sbjct 48713 GTTGCCACC 48705
Score = 87.8 bits (96), Expect = 3e-11
Identities = 127/177 (72%), Gaps = 2/177 (1%)
Strand=Plus/Minus
Query 2070052 GCCGCATGGTAGATCGTCTCAAAGATGGTGCG-GTTGAGGCGACGCGCGCCGGCGCTCTC 2070110
|| || |||||||| ||||| ||||| ||| |||||| ||||| || ||| |||
Sbjct 49459 GCGGCGTGGTAGATGGTCTCGAAGATA-TGCACGTTGAGACGACGAGCCTCGGGAGACTC 49401
Query 2070111 CCACGGCAGGTCCATCATGGCAAACGCGTCGGCCAGGCCCTGCACGCCGACGCCCATCGG 2070170
| | | |||| || || |||||||| || ||||| || |||| || || ||
Sbjct 49400 AAAGGCGTAGCCCATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATGGG 49341
Query 2070171 CCGGTGGCGCAGGTTCGAGTGCCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGAT 2070227
|||||||||| ||| || | |||||||| || ||||||| ||||||||||||
Sbjct 49340 ACGGTGGCGCATGTTGGATCGACGGGCCTCCTCGACGGGGTAGTAGTTGATGTCGAT 49284
>seq2
Length=1573848
Score = 141 bits (156), Expect = 1e-27
Identities = 183/253 (72%), Gaps = 0/253 (0%)
Strand=Plus/Minus
Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532
|||||||||| | ||||||||| || |||| ||||||| ||| || || ||| | | ||
Sbjct 193822 ACTTGGTGACCGACTTGGTACCTTCCGAGATGGCGTGCTTGGAGAGCTCACCGGGGAGGA 193763
Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCG 1485592
| ||||| ||||||||||||||||| || | ||| || |||||| | |
Sbjct 193762 TGAGGCGGACGGCGGTCTGGATCTCTCGCGACGAGATGGTCGACTTCTTGTTGTAGGAAG 193703
Query 1485593 CCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGA 1485652
| || | |||||| ||| ||||||| |||| ||||| | ||| |||||||| | |
Sbjct 193702 CGAGCTTGGAGGCCTCAGTGGCGATGCGCTCGAAGATGTCCTGGACGAACGAGTTGAGAA 193643
Query 1485653 TCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAA 1485712
| | ||| | ||||| ||||| || ||||||||| |||||||||||||| ||| |
Sbjct 193642 TGGCCATGGCCTTGTTCGAGATACCAGTGTCGGGGTGGACCTGCTTGAGCACACGGTAGA 193583
Query 1485713 CAAAGGACGAGTA 1485725
||| ||||||
Sbjct 193582 TGTAGGTCGAGTA 193570
>seq15
Length=627187
Score = 140 bits (154), Expect = 5e-27
Identities = 222/314 (71%), Gaps = 6/314 (2%)
Strand=Plus/Plus
Query 429508 CGCTCCAGATCGGGTGGACCGTCGAGCGCCACCTGCGCACCGGCGACCCCGTGGTCATGA 429567
|||| ||| ||| |||| |||||||||||||| |||||| ||| | | |
Sbjct 605283 CGCTGCAGCCCGGCTGGATTGTCGAGCGCCACCTCAAGGATGGCGACTATGTGCTATTCA 605342
Query 429568 ACCGGCAGCCGTCGCTCCACATGGGGTCGATGCTCAACCACAAGGTGGTGCCCATGCCCG 429627
|||| || || ||||| |||| | ||| ||| | |||| | | || |||| |
Sbjct 605343 ACCGTCAACCTTCGCTGCACAAGATGTCCATGATGTCGCACAGGATCAAGCTCATGGACT 605402
Query 429628 GTCGCACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCG 429687
||||||||| |||||||| || ||| | ||||||||||||| || ||||| |
Sbjct 605403 ACTCCACCTTCCGTCTCAACCTCAGTGTCACGCCCCCCTACAACGCCGATTTCGACGGTG 605462
Query 429688 ACGAGATGAACCTGCACGTGCCCCAG-TCGGAGATGGCACGCGCCGAAGTCGCCCACA-- 429744
||||||||||| |||||||||||||| || ||| | | |||||||| || | || |
Sbjct 605463 ACGAGATGAACTTGCACGTGCCCCAGAGCGAAGA-GACGCGCGCCGAGCTCTCGCAGATT 605521
Query 429745 CCATGGGCGTGGCCCTCAAGGCCGTGTCGCCGCAGGCCAACAAGCCCATCATCGGGCTCG 429804
||||| ||| | | || || ||||||||||||||||||||| |||| || |||
Sbjct 605522 GCATGG--GTGCCGCGTCAGATTGTCTCGCCGCAGGCCAACAAGCCCGTCATGGGTATCG 605579
Query 429805 TGATGGACGCCCTC 429818
|| |||| | |||
Sbjct 605580 TGCAGGACACGCTC 605593
Score = 107 bits (118), Expect = 3e-17
Identities = 163/232 (70%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 428995 ACAACGATATCCGCGGCCAAAAGCAGTCGACCCAGCGGTCGGGCAAGCCCACCAAGGGCG 429054
||||||| || ||| ||| |||| | | ||| | |||| ||||| ||||
Sbjct 604926 ACAACGACATTGCCGGTCAACCGCAGGCCATGCAGTCGAGCGGCAGGCCCATCAAGTCGA 604985
Query 429055 TCGTGGAGCGATTCAAGGGCAAGGAGGGCCGGATCCGCGGCAATTGCATGGGCAAGCGCG 429114
|| | ||| || ||||| ||||| ||||| ||||||| || | ||||||||||| |
Sbjct 604986 TCCGTGCGCGTTTGAAGGGAAAGGAAGGCCGTCTCCGCGGAAACTTGATGGGCAAGCGTG 605045
Query 429115 TCAACTTTACGGCGCGCGCCGTCATCAGTCCCGACCCCGAAATCGACATTGACGAGGTGG 429174
||||||| |||| || ||||||| | |||||| | |||| | |||||||| |
Sbjct 605046 TCAACTTCTCGGCCCGAACCGTCATTACCGGTGACCCCTTACTCGAGCTCGACGAGGTCG 605105
Query 429175 GCGTGCCCTATGAGATCGTCAAGACGCTCACCTTTCCCGAGCGCGTGACGCC 429226
| |||||| | |||| | | ||||||| ||||||||| ||||||||
Sbjct 605106 GTGTGCCCAAGTCCATCGCCCGTAACCTCACCTATCCCGAGCGTGTGACGCC 605157
Score = 100 bits (110), Expect = 5e-15
Identities = 106/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 431022 CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATG 431081
|||||||| || |||||||| ||||||||| ||| || |||| | | ||| |
Sbjct 606392 CCCGAGAGTCGTGGCTTTGTCGAGAACTCGTACCTGCGAGGTCTCACGGCTCAAGAGTTC 606451
Query 431082 TTTCTGCACATGATCGGCGGGCGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGCCGAG 431141
|| | ||| || | ||| || || ||||| ||||||||||||||||||| ||||||
Sbjct 606452 TTCTTCCACGCCATGGCCGGTCGAGAAGGTCTTATCGACACGGCCGTCAAGACCGCCGAG 606511
Query 431142 ACGGGCTACATCCAGCGTCG 431161
|| || ||||||||||||||
Sbjct 606512 ACCGGTTACATCCAGCGTCG 606531
>seq6
Length=877045
Score = 116 bits (128), Expect = 6e-20
Identities = 308/465 (66%), Gaps = 4/465 (1%)
Strand=Plus/Plus
Query 2018913 CTCCCGTGGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCAC 2018972
|| || ||| | |||||||| | || | |||||||| | || |||||| || ||
Sbjct 572669 CTGCCCTGGGTAGAAAAGTATAGGCCCATGCGACTCGACGATGTGGTCGGCAACAAGGAC 572728
Query 2018973 GCCGTTGCCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCG 2019032
|| | | | |||||| | | |||||||||| || | || | | ||
Sbjct 572729 ACCATCGACCGCCTCAAAGTAATTCAGAACGACGGCAACTGTCCGCATCTGCTCATCTCG 572788
Query 2019033 GGCCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGC 2019092
||| |||||||| ||||| ||||| | |||||| || || | || ||||||
Sbjct 572789 GGCTTGCCCGGCATTGGCAAAACCACCTCGGTGCTGTGCCTCGCTCGTGCACTTTTGGGC 572848
Query 2019093 GCGGCCGCCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTC 2019152
| || | | || | |||||||| ||||| || || |||||||| || || || ||
Sbjct 572849 GATGCGTACAAGGAAGGTGTGCTCGAGCTCAACGCTTCCGACGAGCGAGGTGTCGATGTG 572908
Query 2019153 GTGCGTAGAATCATCAAGCATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCCAC 2019212
||||| | | |||||| ||| ||| | | || || || || || | |||
Sbjct 572909 GTGCGCAACAAAATCAAGACGTTTGCTCAGAAGAAAGTCTCGCTCCCACCAGGAAGGCAC 572968
Query 2019213 AAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGA 2019272
||| | ||||||||||| ||||||||| || | ||| | || || |||||||| || ||
Sbjct 572969 AAGATCATCATCCTCGACGAGGCCGACAGCATGACGCCCGCAGCGCAGCAGGCTCTGCG- 573027
Query 2019273 TCG-ACCATGGAAAAGTACACCAACACGACGCGGTT-TGCGCTGGCCTGCAACACGTCGT 2019330
||| |||||||| | || ||||||| || || || ||| | || |||||| |
Sbjct 573028 TCGAACCATGGAGATTCACTCCAACACCACCCGCTTCTGC-TTCGCTTGCAACCAGAGCA 573086
Query 2019331 CGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCT 2019375
| | ||||||| | | || | | ||||||||||||||||
Sbjct 573087 ACAAGATCATCGAGCCGATTCAATCCAGATGCGCCATCTTGCGCT 573131
>seq18
Length=577775
Score = 89.7 bits (98), Expect = 8e-12
Identities = 73/89 (82%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671
|||||||||| | ||||||||| | || ||||| ||||||||||||||||| || |
Sbjct 354359 AGGTCGACCAGGAAATGCTCTTTGAGATCATTCTCGCTGCCAACTACCTCGACATTAAAC 354300
Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTG 2035700
||||||||||| | || |||||||| |||
Sbjct 354299 CCCTCCTCGATGTCGGCTGCAAGACTGTG 354271
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916239060155291
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