Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq9 84.2 2e-11
seq18 82.4 7e-11
>seq9
Length=823499
Score = 84.2 bits (92), Expect = 2e-11
Identities = 117/164 (71%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 50274 ACTTTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGC 50333
||||| ||||| ||| | || || |||||| |||||||| | || || ||||| |
Sbjct 594045 ACTTTCGCCGAGCGTCTCGTCGCCTTTGCCGCCGTTGAAGGCATCTTCTTCTCCGGCTCC 593986
Query 50334 TTTGCAGCCATATTTTACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAAC 50393
|| || |||| || | | || | || | |||||||| ||||| || ||||
Sbjct 593985 TTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAAC 593926
Query 50394 GAGTTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGTG 50437
||| | || |||||||||||||| ||||||| |||||||| ||
Sbjct 593925 GAGCTCATCTCGCGCGACGAAGGTCTGCACACCGACTTTGCCTG 593882
>seq18
Length=577775
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
||||| || | ||||||||| || || | || || || || || || ||||| |||
Sbjct 203383 CCTCCACGGAGACGCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGAA 203442
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| || | |||||| || || || || ||| | || || || ||||||||||| ||
Sbjct 203443 AGGGTACGGCCGTCTTCAAGCTGCTTGCCGGCAAAAATAAGCCGCTGCTGATCGGGTGGG 203502
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
|||||||| ||||| || || || | | || | ||||| | || || ||
Sbjct 203503 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACC 203562
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412
|| | ||| | ||||||||||||| || || || || || ||||||
Sbjct 203563 TCGAGAGTGATGGTCTTGCCGGTCAGAGTCTTGACAAAGATCTGCATA 203610
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488543578630800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |