Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq19 197 1e-45 seq11 89.7 5e-13 >seq19 Length=568126 Score = 197 bits (218), Expect = 1e-45 Identities = 997/1551 (64%), Gaps = 67/1551 (4%) Strand=Plus/Minus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCT-GAGATACACATTGCTAGTGAAAGG 146951 || ||||| || ||||| || || |||||||| | ||| || | ||| ||| |||| Sbjct 49756 TTCACCACCTGGAACTCACCGGCGAGCACACGACGCGAG-TAGATGTTGGACGTGTAAGG 49698 Query 146952 CTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCAC 147011 ||| || |||| || ||| | || || || | ||||| |||||| || | Sbjct 49697 CTCGAAGCACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAG 49638 Query 147012 CAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTG--CCAGTCC 147069 || | || || |||||||||| | ||| ||| |||| | | | | ||||||| Sbjct 49637 CAGAAGCGAGTTGCGCAGACCGTGCTTGGCGATCTTGGCCTTGA--GCTCGGCCCAGTCC 49580 Query 147070 CACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGA 147129 || | |||||| || ||| ||||||||||||||| ||| | || | ||||| Sbjct 49579 CAGAGGTCCGAGGGGGTGACGCCCCACATGTCGTACTGCAGCTCACCCTGCGAAGCGGGC 49520 Query 147130 CTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGC 147189 ||| ||| | || |||| | |||| |||| |||| || || | |||||| Sbjct 49519 GAGCCGGCGTAGGTCTCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCACGATCGCTCGAGA 49460 Query 147190 GCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAG--GACGGTCGCTTCTTCGCTCT 147247 || | | ||| ||||| ||| ||| || ||| || |||| || || || Sbjct 49459 GCGGCGTGGTAGATGGTCTCGAAGATATGCACGTTGAGACGACGA--GCCTCGGGAGACT 49402 Query 147248 CGTAAGGCATA-CGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATA 147306 | ||||| || | || | || ||||| ||||| | |||||||| ||||| ||||| Sbjct 49401 CA-AAGGCGTAGCCCATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATG 49343 Query 147307 GGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCAATA 147366 || || || |||| || || | | | ||| |||| |||| || || Sbjct 49342 GGACGGTGGCGCATGTTGGATCGACGGGCCTCCTCGACGGGGTAGTAGTTGATGTCGATG 49283 Query 147367 ATCTTGTTGAGGTTAC-GCACTACAACTTTAGTTA--TTGTTTTGA-GTTTCTCGAAATC 147422 |||||||| ||||| ||| | | || | | | || || |||| ||| || Sbjct 49282 ATCTTGTTAAGGTTCTTGCAG-ATGGCCTTGGCGACCTCGTGCAGACGTTT---GAAGTC 49227 Query 147423 ATAAGTCCCGTCTT--CGACACGTACGCATT--GGTTC--ACGGCGATAGACGCCAGATT 147476 || |||||| |||| | || || ||| | |||||| || |||| || Sbjct 49226 GTA-----CGTCTTGGCGACGGGGTCG-ATGAAGGTGGGGAGGGCGATCGAGGCCAAGTT 49173 Query 147477 GCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCA 147536 |||||| ||| ||| |||| | ||||||||| | || |||| ||||| |||| ||| Sbjct 49172 GCAGACAGCCACCTCGTCGGGGGCGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGCA 49113 Query 147537 TTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCAT 147596 || ||| || | || | ||| ||||| || || || || || ||| |||| || Sbjct 49112 CTTGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGAT 49053 Query 147597 GTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATGC-AGGTCCTGCGCTC 147655 | | || |||||||||| |||| || | ||| | || || | ||| || Sbjct 49052 GAAGGGGTTGCCGGTCTCGGTCTGCGACTCGAGGATGG-CGTACCAGAGCTTCTGGGCCT 48994 Query 147656 GCACCCGCTGCCGATAGC--GGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTC 147713 || | ||| | || |||||||| ||||| |||||||| | ||||||||||| Sbjct 48993 TGAC--GGTGCGCTTGGCACGGCCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCAAACTC 48936 Query 147714 GTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTC 147773 |||||||||||| || || |||||||| |||| | || ||||| |||||||| | | Sbjct 48935 GTCGCCGTAGCAGTCAGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCC 48876 Query 147774 GTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCG 147833 || | | || | ||| || ||||| |||||||| || ||||| | || || || Sbjct 48875 GTTCTGCTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTCG 48816 Query 147834 CGCTTTGCA-ATCCTCGGCGCCCATGTTGCGTTTC--AAATTAAGCACGCTATAGATGTC 147890 || ||| ||||| ||| ||| || | | | || | | ||| ||| Sbjct 48815 GGC-ACGCACCTCCTCCTTGCCGTGGTT--CTTGCGGAGGTCGAGGAACTCAAAGACGTC 48759 Query 147891 GGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCCCTGGTC 147947 | |||||| || |||| ||| | ||| | ||||| |||| || || |||||||| Sbjct 48758 CGAGTGCCATGGCTCAACGTAAATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTC 48699 Query 147948 GACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAG-TGC 148006 ||| | ||| | ||||||| || ||||| | |||||| | | ||| | || | | Sbjct 48698 GACGTAGCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGCACGATACCG-TTGCTGACAC 48640 Query 148007 CGTTGGT----GGAAT---TGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACG 148059 ||||||| | ||| || | | |||||||| ||| ||| | ||| | | Sbjct 48639 CGTTGGTACCGGCAATGTAGGAAC-CGGTGCCGCGG--ATGCA----GTGGATGTTGAGG 48587 Query 148060 CCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCC--CAATGTCGTGTAGATGC 148117 || || || ||| || ||| || || || ||| || | | || |||||||| Sbjct 48586 CCGATACCACCGGCGGTCTTGGAGAT--CATGGCACACGTCTTGAGCGTGTCGTAGATGC 48529 Query 148118 CGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCG 148177 | ||||| ||||| || | | | | || ||||| | | || || | | | Sbjct 48528 CATCGATCGAGTCGTCCTTCATGGTGACGAGGAAGCACGACGAGAGCTGAGGGTGCGGGG 48469 Query 148178 TTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGAT 148237 | || || ||| |||||||| ||||| ||||| | ||||| ||| | | | Sbjct 48468 TACCTGCGTTGAAGAGGGTGGGGGAGGCGTGTGTAAAGTACTTTTGCGACATGAGGTTGT 48409 Query 148238 ACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCA 148297 | |||||||| ||| |||||||| | |||||| || || | ||||| |||||||||| Sbjct 48408 AGGTCTCAATGGCGCTCTCGATGTCCTGGCCGTGGATACCGACGGCGACACGCATGAGCA 48349 Query 148298 TGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGG 148357 ||||||| || || || || || | |||||| ||| || || ||||| | Sbjct 48348 TGTGCTGGGGACGCTCTGCGACCTTGCCGTTGATGCGGAGGAGGTAGGAGCGCTCGAGCG 48289 Query 148358 TTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408 | ||| | || ||| | ||||| | || || ||||||| |||||||| Sbjct 48288 TCTTGAAGCCGAAGAAGTTGTAGTGGAAGTCGCGCTCGTAGATGATGGCCG 48238 >seq11 Length=758843 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||| ||| | ||| || || || ||||| || |||| | Sbjct 158503 GACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCA 158562 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| ||||| || || || || || || || ||| || || | Sbjct 158563 AAGATGAGACGCTGCTGATCAGGTGGGATACCCTCCTTGTCTTGAATCTTGGCCTTGACG 158622 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||| |||| | |||||| |||| || | ||| ||||| |||||||| || Sbjct 158623 TTGTCGATAGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTACCGGTCAGAGTCTTG 158682 Query 132110 ATGAAAATCTGCATGAC 132126 | || ||||||||||| Sbjct 158683 ACAAAGATCTGCATGAC 158699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610788922840