Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq19 197 1e-45
seq11 89.7 5e-13
>seq19
Length=568126
Score = 197 bits (218), Expect = 1e-45
Identities = 997/1551 (64%), Gaps = 67/1551 (4%)
Strand=Plus/Minus
Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCT-GAGATACACATTGCTAGTGAAAGG 146951
|| ||||| || ||||| || || |||||||| | ||| || | ||| ||| ||||
Sbjct 49756 TTCACCACCTGGAACTCACCGGCGAGCACACGACGCGAG-TAGATGTTGGACGTGTAAGG 49698
Query 146952 CTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCAC 147011
||| || |||| || ||| | || || || | ||||| |||||| || |
Sbjct 49697 CTCGAAGCACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAG 49638
Query 147012 CAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTG--CCAGTCC 147069
|| | || || |||||||||| | ||| ||| |||| | | | | |||||||
Sbjct 49637 CAGAAGCGAGTTGCGCAGACCGTGCTTGGCGATCTTGGCCTTGA--GCTCGGCCCAGTCC 49580
Query 147070 CACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGA 147129
|| | |||||| || ||| ||||||||||||||| ||| | || | |||||
Sbjct 49579 CAGAGGTCCGAGGGGGTGACGCCCCACATGTCGTACTGCAGCTCACCCTGCGAAGCGGGC 49520
Query 147130 CTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGC 147189
||| ||| | || |||| | |||| |||| |||| || || | ||||||
Sbjct 49519 GAGCCGGCGTAGGTCTCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCACGATCGCTCGAGA 49460
Query 147190 GCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAG--GACGGTCGCTTCTTCGCTCT 147247
|| | | ||| ||||| ||| ||| || ||| || |||| || || ||
Sbjct 49459 GCGGCGTGGTAGATGGTCTCGAAGATATGCACGTTGAGACGACGA--GCCTCGGGAGACT 49402
Query 147248 CGTAAGGCATA-CGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATA 147306
| ||||| || | || | || ||||| ||||| | |||||||| ||||| |||||
Sbjct 49401 CA-AAGGCGTAGCCCATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATG 49343
Query 147307 GGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCAATA 147366
|| || || |||| || || | | | ||| |||| |||| || ||
Sbjct 49342 GGACGGTGGCGCATGTTGGATCGACGGGCCTCCTCGACGGGGTAGTAGTTGATGTCGATG 49283
Query 147367 ATCTTGTTGAGGTTAC-GCACTACAACTTTAGTTA--TTGTTTTGA-GTTTCTCGAAATC 147422
|||||||| ||||| ||| | | || | | | || || |||| ||| ||
Sbjct 49282 ATCTTGTTAAGGTTCTTGCAG-ATGGCCTTGGCGACCTCGTGCAGACGTTT---GAAGTC 49227
Query 147423 ATAAGTCCCGTCTT--CGACACGTACGCATT--GGTTC--ACGGCGATAGACGCCAGATT 147476
|| |||||| |||| | || || ||| | |||||| || |||| ||
Sbjct 49226 GTA-----CGTCTTGGCGACGGGGTCG-ATGAAGGTGGGGAGGGCGATCGAGGCCAAGTT 49173
Query 147477 GCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCA 147536
|||||| ||| ||| |||| | ||||||||| | || |||| ||||| |||| |||
Sbjct 49172 GCAGACAGCCACCTCGTCGGGGGCGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGCA 49113
Query 147537 TTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCAT 147596
|| ||| || | || | ||| ||||| || || || || || ||| |||| ||
Sbjct 49112 CTTGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGAT 49053
Query 147597 GTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATGC-AGGTCCTGCGCTC 147655
| | || |||||||||| |||| || | ||| | || || | ||| ||
Sbjct 49052 GAAGGGGTTGCCGGTCTCGGTCTGCGACTCGAGGATGG-CGTACCAGAGCTTCTGGGCCT 48994
Query 147656 GCACCCGCTGCCGATAGC--GGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTC 147713
|| | ||| | || |||||||| ||||| |||||||| | |||||||||||
Sbjct 48993 TGAC--GGTGCGCTTGGCACGGCCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCAAACTC 48936
Query 147714 GTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTC 147773
|||||||||||| || || |||||||| |||| | || ||||| |||||||| | |
Sbjct 48935 GTCGCCGTAGCAGTCAGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCC 48876
Query 147774 GTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCG 147833
|| | | || | ||| || ||||| |||||||| || ||||| | || || ||
Sbjct 48875 GTTCTGCTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTCG 48816
Query 147834 CGCTTTGCA-ATCCTCGGCGCCCATGTTGCGTTTC--AAATTAAGCACGCTATAGATGTC 147890
|| ||| ||||| ||| ||| || | | | || | | ||| |||
Sbjct 48815 GGC-ACGCACCTCCTCCTTGCCGTGGTT--CTTGCGGAGGTCGAGGAACTCAAAGACGTC 48759
Query 147891 GGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCCCTGGTC 147947
| |||||| || |||| ||| | ||| | ||||| |||| || || ||||||||
Sbjct 48758 CGAGTGCCATGGCTCAACGTAAATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTC 48699
Query 147948 GACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAG-TGC 148006
||| | ||| | ||||||| || ||||| | |||||| | | ||| | || | |
Sbjct 48698 GACGTAGCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGCACGATACCG-TTGCTGACAC 48640
Query 148007 CGTTGGT----GGAAT---TGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACG 148059
||||||| | ||| || | | |||||||| ||| ||| | ||| | |
Sbjct 48639 CGTTGGTACCGGCAATGTAGGAAC-CGGTGCCGCGG--ATGCA----GTGGATGTTGAGG 48587
Query 148060 CCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCC--CAATGTCGTGTAGATGC 148117
|| || || ||| || ||| || || || ||| || | | || ||||||||
Sbjct 48586 CCGATACCACCGGCGGTCTTGGAGAT--CATGGCACACGTCTTGAGCGTGTCGTAGATGC 48529
Query 148118 CGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCG 148177
| ||||| ||||| || | | | | || ||||| | | || || | | |
Sbjct 48528 CATCGATCGAGTCGTCCTTCATGGTGACGAGGAAGCACGACGAGAGCTGAGGGTGCGGGG 48469
Query 148178 TTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGAT 148237
| || || ||| |||||||| ||||| ||||| | ||||| ||| | | |
Sbjct 48468 TACCTGCGTTGAAGAGGGTGGGGGAGGCGTGTGTAAAGTACTTTTGCGACATGAGGTTGT 48409
Query 148238 ACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCA 148297
| |||||||| ||| |||||||| | |||||| || || | ||||| ||||||||||
Sbjct 48408 AGGTCTCAATGGCGCTCTCGATGTCCTGGCCGTGGATACCGACGGCGACACGCATGAGCA 48349
Query 148298 TGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGG 148357
||||||| || || || || || | |||||| ||| || || ||||| |
Sbjct 48348 TGTGCTGGGGACGCTCTGCGACCTTGCCGTTGATGCGGAGGAGGTAGGAGCGCTCGAGCG 48289
Query 148358 TTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408
| ||| | || ||| | ||||| | || || ||||||| ||||||||
Sbjct 48288 TCTTGAAGCCGAAGAAGTTGTAGTGGAAGTCGCGCTCGTAGATGATGGCCG 48238
>seq11
Length=758843
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || || |||||||| ||| | ||| || || || ||||| || |||| |
Sbjct 158503 GACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCA 158562
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| |||||||| ||||| || || || || || || || ||| || || |
Sbjct 158563 AAGATGAGACGCTGCTGATCAGGTGGGATACCCTCCTTGTCTTGAATCTTGGCCTTGACG 158622
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | ||| |||| | |||||| |||| || | ||| ||||| |||||||| ||
Sbjct 158623 TTGTCGATAGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTACCGGTCAGAGTCTTG 158682
Query 132110 ATGAAAATCTGCATGAC 132126
| || |||||||||||
Sbjct 158683 ACAAAGATCTGCATGAC 158699
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476610788922840
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