Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1 185 1e-41 >seq1 Length=2015588 Score = 185 bits (204), Expect = 1e-41 Identities = 467/707 (66%), Gaps = 56/707 (8%) Strand=Plus/Minus Query 146840 TGAAATCGTCTATGTCCTCCACCCGCCTCAAAATCTTGAGCTTGGGGAAGGGTCGGGGGT 146899 |||| ||||| || |||| | |||| ||| ||||||||||||||||| | || | Sbjct 1720224 TGAAGTCGTCAATATCCTTGATATCCCTCCTAATGTTGAGCTTGGGGAAGGGCAGAGGAT 1720165 Query 146900 TCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCA 146959 || ||| ||| | |||| || || ||||| | |||||||||||| || |||| Sbjct 1720164 CTCTCTCCAACTGCACCTTCAACGGTTCTACGTGATCCTTGTAGACGTGCGCATCGCCCA 1720105 Query 146960 GGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCA 147019 || | |||| || || || | ||||||| | ||| | ||||||||| | || Sbjct 1720104 TGGCGAGCACCAATTCTTTAGGTTCGCAATCGGTCACCTTGGCGATCATGTAGGTCAACA 1720045 Query 147020 GCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACA 147079 | | |||||| || |||||||| || || |||| || | || | ||| | |||||||| Sbjct 1720044 GAGCGTAGCTAGCAATGTTGAACGGAACGCCCAAACCGAGATCGCACGAACGCTGGTACA 1719985 Query 147080 GCTGGCACGAGAGCT--------CCC----------------CGTCG------GCCACGT 147109 || |||||||| | ||| ||||| | ||| Sbjct 1719984 TTTGACACGAGAGGTGCTTTTTGCCCTCGCCGCGGGCGTAGGCGTCGAGGTTCGAGACGA 1719925 Query 147110 AAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTC 147168 | ||||| ||| | ||||||||||||||||||||||| |||||| ||||||| Sbjct 1719924 AGAACTGCGCAAAC-ATGTGGCACGGCGGCAGCGCCATCAGTTCGAGGTCCTTGGGGTTC 1719866 Query 147169 CAGGCCGAGACCACCAGCCGCCTGCTCTCGG---GGTTCCTCTTAATCTCTTCGATAACC 147225 ||||| || || | || | | |||| |||| |||| |||| ||||| Sbjct 1719865 CAGGCGCTGAGCAGGATGCGACGG---TCGGTAGGGTTGTTCTTGATCTTGTCGAT---- 1719813 Query 147226 CACCTCAGC----TGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCT 147281 ||| | ||| || || ||||| || || |||||| || |||| || |||| Sbjct 1719812 CACTTGAGCGAGTTGATCGACGCCTTGACCGGTGTAGTTGGTATCGCAATCTGTGTACTC 1719753 Query 147282 GGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTG 147341 || |||||||| | ||| ||||| ||||| || || |||| |||||| |||| || Sbjct 1719752 TGCGCCAAAGTGTCGCCATTGGAAACCGTAGACGGGGCCCAAGTCGCC-----TTCTCTG 1719698 Query 147342 CG---AGA-AGCCCGCCCGCTT-GAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCC 147396 || ||| ||||||| || | ||| || || | || |||| | ||||||||||| Sbjct 1719697 CGGTGAGACAGCCCGCGCGAGTCGAGGAATTCACGCGATCCGTTGCCGTCCCAGATGTGT 1719638 Query 147397 ACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCC 147456 || ||||| | | |||| || || || || ||| | |||||||| |||||| Sbjct 1719637 ACGCCCTTATCTGTGAGCAGTTTCGAATCGGTCTTGCCAGCAACAAACCAGAGGAGCTCC 1719578 Query 147457 TCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAA 147503 || | || || | ||||||| | ||||||||| ||||| || || Sbjct 1719577 TCGAGCACGCCACGGAAAAAGACACGCTTGGTGGTGAGCAGAGGCAA 1719531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487496741600