Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq9 91.5 2e-13 >seq9 Length=823499 Score = 91.5 bits (100), Expect = 2e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718 ||||| || || ||||| || ||||| ||||| ||||| |||||||| || |||| || Sbjct 593924 TCGTTGGAGAAGGTGAGACCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCG 593983 Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTC 39771 || || || || |||||||||||||| || || ||||| || || || | ||| Sbjct 593984 AAGGAGCCGGAGAAGAAGATGCCTTCAACGGCGGCAAAGGCGACGAGACGCTC 594036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908207541160