Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq9 102 3e-16 seq19 86.0 2e-11 >seq9 Length=823499 Score = 102 bits (112), Expect = 3e-16 Identities = 127/173 (73%), Gaps = 1/173 (1%) Strand=Plus/Minus Query 443700 TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTT 443759 |||| |||||| || ||||| ||||| | || ||||| | || || |||| ||| Sbjct 594042 TTCGCCGAGCGTCTCGTCGCCTTTGCCGCCGTTGAAGGCATCTTCTTCTCCGGCTCCTTC 593983 Query 443760 AGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGA 443819 ||||||||||||||| | || ||||| || || |||| |||||| ||||| ||||| Sbjct 593982 -GCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAACGA 593924 Query 443820 ACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACA 443872 || ||| || ||||| ||| |||| |||||| ||||| || |||| || Sbjct 593923 GCTCATCTCGCGCGACGAAGGTCTGCACACCGACTTTGCCTGCCTCCTCTTCA 593871 >seq19 Length=568126 Score = 86.0 bits (94), Expect = 2e-11 Identities = 153/221 (69%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 256125 AGATCGAGGAGCACGGACTGCGCAACTCGCAACGATTGGCGCCCATGCCAACCGCCAGCA 256184 |||||| ||||||| ||||||||||||| | | || |||||||| |||||| | Sbjct 49603 AGATCGCCAAGCACGGTCTGCGCAACTCGCTTCTGCTCGCTCCCATGCCCACCGCCTCGA 49662 Query 256185 CCGCTCAAATCCTGGGTAACGTGGAAAGCATCGAACCCCTGACTACCAACTTCTTCTCGC 256244 || ||| ||||| || | || || |||| || || ||||| ||| ||||| Sbjct 49663 CCAGTCAGATCCTCGGCTTCAACGAGTGCTTCGAGCCTTACACGTCCAACATCTACTCGC 49722 Query 256245 GCCGCGTTCGCTCCGGCGAGTTCGCCGTGGTGAACCAGTACTTGGTGGACGACTTGGTAC 256304 | || || | | |||| |||||| |||||||||| | ||| | ||| | || | Sbjct 49723 GTCGTGTGCTCGCCGGTGAGTTCCAGGTGGTGAACCCTTGGTTGCTCCGCGAGCTCGT-C 49781 Query 256305 GA-CTCGGTCTGTGGAACGAGAAGATGCAACAACGCATAAT 256344 || | |||||||||||||| | |||| | | ||||| || Sbjct 49782 GAGCAGGGTCTGTGGAACGACACGATGAAGAACCGCATCAT 49822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588334595811705