Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq19 196 6e-45
seq13 131 2e-25
seq9 107 2e-18
>seq19
Length=568126
Score = 196 bits (216), Expect = 6e-45
Identities = 906/1420 (64%), Gaps = 31/1420 (2%)
Strand=Plus/Minus
Query 118155 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 118214
|||||||| ||||| || | | ||||| |||| |||||| ||||| ||||||||
Sbjct 49744 AACTCACCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCG 49685
Query 118215 TTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 118274
||| || | ||| || || ||||| ||||||||||| || | ||||| |||
Sbjct 49684 TTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGCAGAAGCGAGTTG 49625
Query 118275 CGGAGACC---CTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTT 118331
|| ||||| ||| | | || ||||||| || ||||||| || | |
Sbjct 49624 CGCAGACCGTGCTTGGCGATCTTGG---CCTTGAGCTCGGCCCAGTCCCAGAGGTCCGAG 49568
Query 118332 G---TCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCA 118388
| | | ||| ||||| || |||| || ||| || || || ||||| || |
Sbjct 49567 GGGGTGACGCCC---CACATGTCGTACTGCAGCTCACCCTGCGAAGCGGGCGAGCCGGCG 49511
Query 118389 AATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGA-GCTCGCCTCGAGGGCTGCGTG 118447
| ||||| || | ||| | || |||| ||| | | |||| ||||| || |||||
Sbjct 49510 TAGGTCTCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCACGATCGC-TCGAGAGCGGCGTG 49452
Query 118448 ATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCG-A 118506
|| || || || || || | | || | |||||| || ||||| ||| |
Sbjct 49451 GTAGATGGTCTCGAAGATATGCACGTTGAGACGACGAGCCTCGGGAGACTCAAAGGCGTA 49392
Query 118507 GTCGGCACAAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGT 118565
| | || | || || | || || ||||| |||||||||| || || || || ||
Sbjct 49391 GCC--CATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATGGGACGGTGG 49334
Query 118566 CTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTT 118625
| ||| || || || || ||| ||||| || | || | ||||| | | | ||
Sbjct 49333 CGCATGTTGGATCGACGGGCCTCCTCGACGGGGTAGTAGTTGATGTCGATGATCTTGTTA 49274
Query 118626 AGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAA--CTGCGAG 118683
|| || ||| || |||| | || || || || || | | || | || | |
Sbjct 49273 AGGTTCTTGCAGATGGCCTTGGCGACCTCGTGCAGACGTTTGAAGTCGTACGTCTTGGCG 49214
Query 118684 TCTCT-TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCA 118742
| || ||| | | || |||||||| || |||| || || |||| |||
Sbjct 49213 ACGGGGTCGATGA---AGGTGGGGAGGGCGATCGAGGCCAAGTTGCAGACAGCCACCTCG 49157
Query 118743 TCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAG 118802
|| | ||||||| ||||| || ||||||||||| || | ||| |||||||| | |
Sbjct 49156 TCGGGGGCGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGCACTTGATGGTGCCGAGG 49097
Query 118803 TTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTC 118862
||||| || || ||| |||| ||||||||||| || ||| | || | || |||
Sbjct 49096 TTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGATGAAGGGGTTGCCGGTC 49037
Query 118863 TCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGC 118921
|| || || |||| ||| || || | ||||| | || | || | || ||| |||||
Sbjct 49036 TCGGTCTGCGACTCGAGGATGGCGTACCAGAGCTTCTGGGCCTTG-ACGGTGCGCTTGGC 48978
Query 118922 TCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGA 118981
|| ||||| ||||||| ||||||| |||||||| || || | || |
Sbjct 48977 ACGGCCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCAAACTCGTCGCCGTAGCAGTCAGC 48918
Query 118982 GAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTT 119041
||| || || || | ||||| | ||| ||||| | || || ||| |||| |||
Sbjct 48917 GAGGCCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGTTCTGCTCGACCCTCTT 48858
Query 119042 CATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATC 119101
||||||||| || || | |||||| || ||||||| || || || | || || |
Sbjct 48857 CATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTCGGGCACGCACCTCCTCCTT 48798
Query 119102 CCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTA 119161
|| || || || | || | || || | || |||| |||||| || || | |||
Sbjct 48797 GCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAGACGTCCGAGTGCCATGGCTCAACGTA 48738
Query 119162 CACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTT 119218
| || | | || ||| ||| |||||| || || | || ||| |||
Sbjct 48737 AATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTAGCGGGCGGTGTTGTT 48678
Query 119219 AAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGA 119278
|| || || ||||| || | |||||| | | || || || || ||| ||
Sbjct 48677 GAAGACGCGGAGCATGGGCACGATACCGTTGCTGACACCGTTGGTACCGGCAATGTAGGA 48618
Query 119279 CTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTG 119338
|| | | || |||||||| | || ||||| || || ||| |||||
Sbjct 48617 ACCGGTGCCGCGGATGCAGTGGATGTTGAGGCCGATACCACCGGCGGTCTTGGAGATCAT 48558
Query 119339 CGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAG 119398
|| ||| | |||| || ||||||| |||||||||||||| |||| | | || |||
Sbjct 48557 GGCACACGTCTTGAGCGTGTCGTAGATGCCATCGATCGAGTCGTCCTTCATGGTGACGAG 48498
Query 119399 GAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTG 119458
|||||| ||| | ||||| || ||||| ||||||||||| || || | |||||
Sbjct 48497 GAAGCACGACGAGAGCTGAGGGTGCGGGGTACCTGCGTTGAAGAGGGTGGGGGAGGCGTG 48438
Query 119459 GATGAACATAC-CTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCC 119517
| || ||| ||| ||||| || ||||||||| | | || ||||| | |
Sbjct 48437 TGT-AAAGTACTTTTGCGACATGAGGTTGTAGGTCTCAATGGCGCTCTCGATGTCCTGGC 48379
Query 119518 CGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 119557
|||| ||||||| | ||| ||||| | ||||| |||||
Sbjct 48378 CGTGGATACCGACGGCGACACGCATGAGCATGTGCTGGGG 48339
>seq13
Length=657001
Score = 131 bits (144), Expect = 2e-25
Identities = 225/327 (69%), Gaps = 0/327 (0%)
Strand=Plus/Minus
Query 179733 CTTGAGGAGCGATGGCCAGAAGTAGTGGATCATATTGAGGATGAGACCCTTAATGTGTGA 179792
||| || ||||| || | |||| || || | |||| |||||||||||| ||||| ||
Sbjct 372993 CTTTAGCAGCGAAGGGTAAAAGTGGTCGAGGAAGTTGATGATGAGACCCTTGATGTGCGA 372934
Query 179793 ACCATCGTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATC 179852
||| |||| |||| ||| ||||| | ||| | | || || || || | || ||
Sbjct 372933 ACCGTCGTGATCCTGATCGGTCATGACCATGATGCTGCCGTATCGCAGACTGTTCACGTC 372874
Query 179853 TTGATAATCCTTACCTTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTT 179912
|||| | ||| || || || ||||||||||||| ||||| | |||| ||| |||
Sbjct 372873 AAGATACTGCTTGCCGTGCTGCAGACCCAAGATCTCCTTGATGGCCTTGATCTCGGCGTT 372814
Query 179913 TGATGTGAGTTGCGCCACTGAAGCATCTCGGACATTTTTACACTTCCCACGGAGAGGGAA 179972
||| || | || || || ||||| || ||| |||||||| |||||
Sbjct 372813 CTTCATGATCTGATCGTGAGAGGCTTCACGGACGTTCAAGAGCTTACCACGGAGCGGGAA 372754
Query 179973 CACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGA 180032
||||||||||| || | || ||| | || |||||| || ||||| | ||| || ||
Sbjct 372753 CACACCGTAGTTGTCTCTTCCGACCTCGACGATACCAGCGACGGCGAGCGACTTGGCCGA 372694
Query 180033 ATCACCCTCCGTCACGATGAGCGTACA 180059
||||| || || | ||||||||| ||
Sbjct 372693 GTCACCTTCGGTGAGGATGAGCGTGCA 372667
>seq9
Length=823499
Score = 107 bits (118), Expect = 2e-18
Identities = 173/245 (71%), Gaps = 4/245 (2%)
Strand=Plus/Plus
Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074
|||||| || ||| ||||| ||||| || |||||||| || || |||||| |||||
Sbjct 593884 GGCAAAGTCGGTGTGCAGACCTTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGACC 593943
Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134
||||||||||| |||||||| | |||||| || | || ||||| |||||||||||
Sbjct 593944 GGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGAT 594003
Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGC-AAAGGAGCGGGACTTTGTATC-A 130192
|| || || || || || | ||||||||| || |||| ||| | |||| |
Sbjct 594004 GCCTTCAACGGCGGCAAAGGCGACGAGACGCTCGGCGAAAGTGGCGCG--CTTGTCGCTG 594061
Query 130193 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 130252
| ||| || |||||| | || || | || || |||| ||||| || || |||
Sbjct 594062 ATCCATCGCAGCGCCCAGTCGGCTTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTCA 594121
Query 130253 AAGAG 130257
|||||
Sbjct 594122 AAGAG 594126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434666599640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |