Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq19 196 6e-45 seq13 131 2e-25 seq9 107 2e-18 >seq19 Length=568126 Score = 196 bits (216), Expect = 6e-45 Identities = 906/1420 (64%), Gaps = 31/1420 (2%) Strand=Plus/Minus Query 118155 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 118214 |||||||| ||||| || | | ||||| |||| |||||| ||||| |||||||| Sbjct 49744 AACTCACCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCG 49685 Query 118215 TTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 118274 ||| || | ||| || || ||||| ||||||||||| || | ||||| ||| Sbjct 49684 TTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGCAGAAGCGAGTTG 49625 Query 118275 CGGAGACC---CTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTT 118331 || ||||| ||| | | || ||||||| || ||||||| || | | Sbjct 49624 CGCAGACCGTGCTTGGCGATCTTGG---CCTTGAGCTCGGCCCAGTCCCAGAGGTCCGAG 49568 Query 118332 G---TCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCA 118388 | | | ||| ||||| || |||| || ||| || || || ||||| || | Sbjct 49567 GGGGTGACGCCC---CACATGTCGTACTGCAGCTCACCCTGCGAAGCGGGCGAGCCGGCG 49511 Query 118389 AATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGA-GCTCGCCTCGAGGGCTGCGTG 118447 | ||||| || | ||| | || |||| ||| | | |||| ||||| || ||||| Sbjct 49510 TAGGTCTCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCACGATCGC-TCGAGAGCGGCGTG 49452 Query 118448 ATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCG-A 118506 || || || || || || | | || | |||||| || ||||| ||| | Sbjct 49451 GTAGATGGTCTCGAAGATATGCACGTTGAGACGACGAGCCTCGGGAGACTCAAAGGCGTA 49392 Query 118507 GTCGGCACAAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGT 118565 | | || | || || | || || ||||| |||||||||| || || || || || Sbjct 49391 GCC--CATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATGGGACGGTGG 49334 Query 118566 CTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTT 118625 | ||| || || || || ||| ||||| || | || | ||||| | | | || Sbjct 49333 CGCATGTTGGATCGACGGGCCTCCTCGACGGGGTAGTAGTTGATGTCGATGATCTTGTTA 49274 Query 118626 AGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAA--CTGCGAG 118683 || || ||| || |||| | || || || || || | | || | || | | Sbjct 49273 AGGTTCTTGCAGATGGCCTTGGCGACCTCGTGCAGACGTTTGAAGTCGTACGTCTTGGCG 49214 Query 118684 TCTCT-TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCA 118742 | || ||| | | || |||||||| || |||| || || |||| ||| Sbjct 49213 ACGGGGTCGATGA---AGGTGGGGAGGGCGATCGAGGCCAAGTTGCAGACAGCCACCTCG 49157 Query 118743 TCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAG 118802 || | ||||||| ||||| || ||||||||||| || | ||| |||||||| | | Sbjct 49156 TCGGGGGCGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGCACTTGATGGTGCCGAGG 49097 Query 118803 TTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTC 118862 ||||| || || ||| |||| ||||||||||| || ||| | || | || ||| Sbjct 49096 TTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGATGAAGGGGTTGCCGGTC 49037 Query 118863 TCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGC 118921 || || || |||| ||| || || | ||||| | || | || | || ||| ||||| Sbjct 49036 TCGGTCTGCGACTCGAGGATGGCGTACCAGAGCTTCTGGGCCTTG-ACGGTGCGCTTGGC 48978 Query 118922 TCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGA 118981 || ||||| ||||||| ||||||| |||||||| || || | || | Sbjct 48977 ACGGCCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCAAACTCGTCGCCGTAGCAGTCAGC 48918 Query 118982 GAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTT 119041 ||| || || || | ||||| | ||| ||||| | || || ||| |||| ||| Sbjct 48917 GAGGCCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGTTCTGCTCGACCCTCTT 48858 Query 119042 CATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATC 119101 ||||||||| || || | |||||| || ||||||| || || || | || || | Sbjct 48857 CATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTCGGGCACGCACCTCCTCCTT 48798 Query 119102 CCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTA 119161 || || || || | || | || || | || |||| |||||| || || | ||| Sbjct 48797 GCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAGACGTCCGAGTGCCATGGCTCAACGTA 48738 Query 119162 CACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTT 119218 | || | | || ||| ||| |||||| || || | || ||| ||| Sbjct 48737 AATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTAGCGGGCGGTGTTGTT 48678 Query 119219 AAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGA 119278 || || || ||||| || | |||||| | | || || || || ||| || Sbjct 48677 GAAGACGCGGAGCATGGGCACGATACCGTTGCTGACACCGTTGGTACCGGCAATGTAGGA 48618 Query 119279 CTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTG 119338 || | | || |||||||| | || ||||| || || ||| ||||| Sbjct 48617 ACCGGTGCCGCGGATGCAGTGGATGTTGAGGCCGATACCACCGGCGGTCTTGGAGATCAT 48558 Query 119339 CGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAG 119398 || ||| | |||| || ||||||| |||||||||||||| |||| | | || ||| Sbjct 48557 GGCACACGTCTTGAGCGTGTCGTAGATGCCATCGATCGAGTCGTCCTTCATGGTGACGAG 48498 Query 119399 GAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTG 119458 |||||| ||| | ||||| || ||||| ||||||||||| || || | ||||| Sbjct 48497 GAAGCACGACGAGAGCTGAGGGTGCGGGGTACCTGCGTTGAAGAGGGTGGGGGAGGCGTG 48438 Query 119459 GATGAACATAC-CTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCC 119517 | || ||| ||| ||||| || ||||||||| | | || ||||| | | Sbjct 48437 TGT-AAAGTACTTTTGCGACATGAGGTTGTAGGTCTCAATGGCGCTCTCGATGTCCTGGC 48379 Query 119518 CGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 119557 |||| ||||||| | ||| ||||| | ||||| ||||| Sbjct 48378 CGTGGATACCGACGGCGACACGCATGAGCATGTGCTGGGG 48339 >seq13 Length=657001 Score = 131 bits (144), Expect = 2e-25 Identities = 225/327 (69%), Gaps = 0/327 (0%) Strand=Plus/Minus Query 179733 CTTGAGGAGCGATGGCCAGAAGTAGTGGATCATATTGAGGATGAGACCCTTAATGTGTGA 179792 ||| || ||||| || | |||| || || | |||| |||||||||||| ||||| || Sbjct 372993 CTTTAGCAGCGAAGGGTAAAAGTGGTCGAGGAAGTTGATGATGAGACCCTTGATGTGCGA 372934 Query 179793 ACCATCGTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATC 179852 ||| |||| |||| ||| ||||| | ||| | | || || || || | || || Sbjct 372933 ACCGTCGTGATCCTGATCGGTCATGACCATGATGCTGCCGTATCGCAGACTGTTCACGTC 372874 Query 179853 TTGATAATCCTTACCTTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTT 179912 |||| | ||| || || || ||||||||||||| ||||| | |||| ||| ||| Sbjct 372873 AAGATACTGCTTGCCGTGCTGCAGACCCAAGATCTCCTTGATGGCCTTGATCTCGGCGTT 372814 Query 179913 TGATGTGAGTTGCGCCACTGAAGCATCTCGGACATTTTTACACTTCCCACGGAGAGGGAA 179972 ||| || | || || || ||||| || ||| |||||||| ||||| Sbjct 372813 CTTCATGATCTGATCGTGAGAGGCTTCACGGACGTTCAAGAGCTTACCACGGAGCGGGAA 372754 Query 179973 CACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGA 180032 ||||||||||| || | || ||| | || |||||| || ||||| | ||| || || Sbjct 372753 CACACCGTAGTTGTCTCTTCCGACCTCGACGATACCAGCGACGGCGAGCGACTTGGCCGA 372694 Query 180033 ATCACCCTCCGTCACGATGAGCGTACA 180059 ||||| || || | ||||||||| || Sbjct 372693 GTCACCTTCGGTGAGGATGAGCGTGCA 372667 >seq9 Length=823499 Score = 107 bits (118), Expect = 2e-18 Identities = 173/245 (71%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| || ||| ||||| ||||| || |||||||| || || |||||| ||||| Sbjct 593884 GGCAAAGTCGGTGTGCAGACCTTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGACC 593943 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 ||||||||||| |||||||| | |||||| || | || ||||| ||||||||||| Sbjct 593944 GGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGAT 594003 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGC-AAAGGAGCGGGACTTTGTATC-A 130192 || || || || || || | ||||||||| || |||| ||| | |||| | Sbjct 594004 GCCTTCAACGGCGGCAAAGGCGACGAGACGCTCGGCGAAAGTGGCGCG--CTTGTCGCTG 594061 Query 130193 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 130252 | ||| || |||||| | || || | || || |||| ||||| || || ||| Sbjct 594062 ATCCATCGCAGCGCCCAGTCGGCTTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTCA 594121 Query 130253 AAGAG 130257 ||||| Sbjct 594122 AAGAG 594126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434666599640