Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq19 257 2e-63
seq13 154 2e-32
seq9 132 6e-26
>seq19
Length=568126
Score = 257 bits (284), Expect = 2e-63
Identities = 901/1391 (65%), Gaps = 27/1391 (2%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| ||||| ||||||| || ||| ||||||| || || | ||||| || | |
Sbjct 48339 CCCCAGCACATGCTCATGCGTGTCGCCGTCGGTATCCACGGCCAGGACATCGAGAGCGCC 48398
Query 104282 TTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCTT 104340
| ||||| ||| || ||||| ||| ||| || | ||||| | || ||||||||
Sbjct 48399 ATTGAGACCTACAACCTCATGTCGCAAAAGTACTTT-ACACACGCCTCCCCCACCCTCTT 48457
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
||| || ||||| || || || | || |||||||| || ||| ||||| ||
Sbjct 48458 CAACGCAGGTACCCCGCACCCTCAGCTCTCGTCGTGCTTCCTCGTCACCATGAAGGACGA 48517
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
||| ||| | || ||||| | || || | | |||||| ||||| ||| || ||
Sbjct 48518 CTCGATCGATGGCATCTACGACACGCTCAAGACGTGTGCCATGATCTCCAAGACCGCCGG 48577
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520
||||| || | ||||||| | | | || || ||| || || ||
Sbjct 48578 TGGTATCGGCCTCAACATCCACTGCATCCGCGGCACCGGTTCCTACATTGCCGGTACCAA 48637
Query 104521 TGGTCAATCAG--ATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578
||| |||| | ||||| | || ||||| ||||| || ||| ||| || |||||
Sbjct 48638 CGGTG--TCAGCAACGGTATCGTGCCCATGCTCCGCGTCTTCAACAACACCGCCCGCTAC 48695
Query 104579 GTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 104632
|| | || | ||| ||||| || | | || | || |||||||||||
Sbjct 48696 GTCGACCAGGGTGGCAACAAGCGTCCC---GGTGCCTTTGCCATTTACGTTGAGCCATGG 48752
Query 104633 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGG 104692
||| |||| || | |||||||| || | || ||||| || | ||||||| |||
Sbjct 48753 CACTCGGACGTCTTTGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTGCGT 48812
Query 104693 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752
||| || ||||||| ||| |||||| | || ||||||||||||||||| || ||| ||
Sbjct 48813 GCCCGAGAGCTCTTCTACGCACTCTGGGTGCCCGATCTCTTCATGAAGAGGGTCGAGCAG 48872
Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812
| ||| | ||||| ||| | || || || || || || ||| | || | ||
Sbjct 48873 AACGGCGACTGGTCGCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCTGACTGCTACGGC 48932
Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCG-ACGGT 104871
|| |||||||| ||| ||| ||||||| || || || || | ||| || ||
Sbjct 48933 GACGAGTTTGAGCGCCTCTACGAGCGCTACGAGGCCGAGGGCCGTGCCA-AGCGCACCGT 48991
Query 104872 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930
| || | || | | ||| | || || ||| |||| || |||||||| || | || |
Sbjct 48992 -CAAGGCCCAGAAGCTCTGGTACGCCATCCTCGAGTCGCAGACCGAGACCGGCAACCCCT 49050
Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990
||| || ||||| || ||| ||||| ||||| || || ||||| | || ||||
Sbjct 49051 TCATCCTCTACAAGGATGCCGCTAACCGCAAGAGCAACCAGAAGAACCTCGGCACCATCA 49110
Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050
|| | ||||| | || || || || | || | | | | || ||| |||||| |
Sbjct 49111 AGTGCTCCAACTTGTGCACCGAGATTATCGAGTACAGCGCCCCCGACGAGGTGGCTGTCT 49170
Query 105051 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATT 105110
| ||| | || || ||||| ||||||| | | || || | | ||||| | || |
Sbjct 49171 GCAACTTGGCCTCGATCGCCCTCCCCACCTTCATCGACCCCGTCGCCAAGACGTACGACT 49230
Query 105111 ATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATA 105170
|| || ||||| || | || | || ||| ||||| |||| | || || |
Sbjct 49231 TCAAACGTCTGCACGAGGTCGCCAAGGCCATCTGCAAGAACCTTAACAAGATCATCGACA 49290
Query 105171 GAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTC 105230
|| | |||||||| ||| || ||| ||| || ||| | |||||||| || |||
Sbjct 49291 TCAACTACTACCCCGTCGAGGAGGCCCGTCGATCCAACATGCGCCACCGTCCCATCGGTA 49350
Query 105231 TCGGTGTTCAGGGTCTCGCGGATGTATTCAT--TCTTTGTCGCCACGCATTTGATTCCGA 105288
||||||| |||||||| || || | ||||| || | | || |||| ||||| ||
Sbjct 49351 TCGGTGTCCAGGGTCTTGCCGACGCCTTCATGATCATGG--GCTACGCCTTTGAGTCTCC 49408
Query 105289 CGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGC 105348
||| || |||| | || || || |||||||| || ||||||||||| || ||
Sbjct 49409 CGAGGCTCGTCGTCTCAACGTGCATATCTTCGAGACCATCTACCACGCCGCTCTCGA-GC 49467
Query 105349 GA--GTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCT 105406
|| || | ||| |||| || | || | || || |||| | || || || |||
Sbjct 49468 GATCGTGC-GAGCTGGCTCAGCAGCACGGCACCTACGAGACCTACGCCGGCTCGCCCGCT 49526
Query 105407 TCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGG 105466
|| || || | ||| || | || ||||||| | || | | || ||||||
Sbjct 49527 TCGCAGGGTGAGCTGCAGTACGACATGTGGGGCGTCACCCCCTCGGACCTCTGGGACTGG 49586
Query 105467 GAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCA 105526
| | ||||||| ||| || | ||||| || ||| || || | |||||
Sbjct 49587 GCCGAGCTCAAGGCCAAGATCGCCAAGCACGGTCTGCGCAACTCGCTTCTGCTCGCTCCC 49646
Query 105527 ATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACG 105586
||||| || ||||| ||| || ||| | || || || ||||| || || ||||||
Sbjct 49647 ATGCCCACCGCCTCGACCAGTCAGATCCTCGGCTTCAACGAGTGCTTCGAGCCTTACACG 49706
Query 105587 ACGAACATCTA 105597
| ||||||||
Sbjct 49707 TCCAACATCTA 49717
>seq13
Length=657001
Score = 154 bits (170), Expect = 2e-32
Identities = 210/293 (72%), Gaps = 0/293 (0%)
Strand=Plus/Minus
Query 169160 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 169219
|||| ||||||||||||||||| |||||||||| ||| ||| ||||||| |||||
Sbjct 372959 TTGATGATGAGACCCTTGATGTGCGAACCGTCGTGATCCTGATCGGTCATGACCATGATG 372900
Query 169220 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 169279
| || || || || | || || |||| | ||| || || || ||||||||||||
Sbjct 372899 CTGCCGTATCGCAGACTGTTCACGTCAAGATACTGCTTGCCGTGCTGCAGACCCAAGATC 372840
Query 169280 TTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACA 169339
| ||||| | |||| ||| ||| ||| ||| | |||||| || || ||
Sbjct 372839 TCCTTGATGGCCTTGATCTCGGCGTTCTTCATGATCTGATCGTGAGAGGCTTCACGGACG 372780
Query 169340 TTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGAGAGA 169399
||| ||| ||||| || ||||| |||||||||| || | || || || || |
Sbjct 372779 TTCAAGAGCTTACCACGGAGCGGGAACACACCGTAGTTGTCTCTTCCGACCTCGACGATA 372720
Query 169400 CCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACA 169452
|| ||||| ||||| | ||| ||||||||||| ||||||| ||||||||| ||
Sbjct 372719 CCAGCGACGGCGAGCGACTTGGCCGAGTCACCTTCGGTGAGGATGAGCGTGCA 372667
>seq9
Length=823499
Score = 132 bits (146), Expect = 6e-26
Identities = 124/158 (78%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 94798 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 94857
|| || ||||| ||| |||| ||||| ||||| || ||||||||||| || ||||||
Sbjct 594042 TTCGCCGAGCGTCTCGTCGCCTTTGCCGCCGTTGAAGGCATCTTCTTCTCCGGCTCCTTC 593983
Query 94858 TGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAG 94917
| | || | |||||||||||||| ||||||||||| |||||| |||||||||||||
Sbjct 593982 GCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAACGAG 593923
Query 94918 CTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
|| ||||| || ||||| || || ||| || |||||
Sbjct 593922 CTCATCTCGCGCGACGAAGGTCTGCACACCGACTTTGC 593885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260296937560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |