Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq16 196 1e-44 seq11 129 2e-24 seq1 100 9e-16 >seq16 Length=599489 Score = 196 bits (216), Expect = 1e-44 Identities = 590/904 (65%), Gaps = 13/904 (1%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || || |||||| | |||||||| || || |||||||| || |||||||| || ||| Sbjct 425154 GCCATCGGTATCGATCTTGGTACTACCTACTCGTGTGTTGCCGTCTGGCAAAACGACCGT 425213 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || | ||||| || || || |||||| | || || || ||||| || || || ||| Sbjct 425214 GTCGAGGTCATTGCCAACGACCAGGGTAACCGCACCACTCCCTCATATGTCGCCTTCACC 425273 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || | |||||| | || ||||| |||| || || || | ||| || || | || Sbjct 425274 GACTCGGAGCGTCTCATCGGTGACGCTGCCAAGAACCAGGTCGCTATGAACCCCCACAAC 425333 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTC--TGACAAATCTACACAA 349435 || || || || || ||||| || |||||| | ||||| | || | | | || Sbjct 425334 ACCGTCTTCGACGCCAAGCGTCTCATTGGTCGCAAGTTCGACGATGCCGAGGTT---CAG 425390 Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATT 349495 || || | || || | ||||| || || | | ||||| || || || Sbjct 425391 TCCGACATGAAGCACTGGCCTTTCGAGGTCGTCACG---GTCGGTGGCAAGCCTCAGATC 425447 Query 349496 GAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTT 349555 | || || || ||||| | || || |||||||| || || || |||||| Sbjct 425448 CGTATCGAGTACAAGGGTGAGAAGAAGACCTTCACCCCCGAAGAGATCTCGTCGATGGTT 425507 Query 349556 TTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTT 349615 | | || ||| || | || || || || | |||| || || | ||||| || Sbjct 425508 CTCCTCAAGATGCGCGAGACCGCCGAGGCCTACCTCGGTGGCACCGTCAAGGATGCCGTC 425567 Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675 | || || || ||||| || || || | |||||| || || || ||||| || | | Sbjct 425568 GTCACCGTCCCTGCCTACTTCAACGACTCGCAGCGTCAGGCCACCAAGGATGCCGGTATC 425627 Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735 || |||| | || || | |||| || || || ||||| || || || || || || Sbjct 425628 ATCTCGGGCCTCAACGTGATGCGAATCATCAACGAGCCCACCGCCGCCGCCATCGCTTAC 425687 Query 349736 GGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGT 349795 || || || || | || ||| || | || |||| || || || || ||||||||| Sbjct 425688 GGTCTCGACAAGAAGACTGAGGGCGAGAGGAACGTTCTCATCTTCGACTTGGGTGGTGGT 425747 Query 349796 ACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCT 349855 || || ||||| || || || || | || ||||| || || || || || || ||||| Sbjct 425748 ACCTTCGATGTCTCGCTCCTCACCATCGAGGAGGGTATCTTCGAGGTCAAGGCCACTGCC 425807 Query 349856 GGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAA 349915 ||||| || || | ||||| || || || || || |||||||| || || || | Sbjct 425808 GGTGACACCCACTTGGGTGGTGAGGACTTCGACAACCGTCTCGTCAACCACTTCGTCCAG 425867 Query 349916 GAATTTAAGCGTCAAGCTAAAATTGATATTGGAGAT--AATCCTAGAGCAATGCGTCGCC 349973 || || ||||| |||| | || | | || | || | | || | ||||| | Sbjct 425868 GAGTTCAAGCG-CAAG-AACAAGAAGGACTTGACCTCCAACGCCCGTGCCCTCCGTCGTC 425925 Query 349974 TAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTG 350033 | | || || ||||| ||||| ||||| || | || || || |||| ||| | || | Sbjct 425926 TCCGCACCGCCTGTGAGCGTGCCAAGCGCACCCTCTCGTCGGCTGCCCAGACCACCATCG 425985 Query 350034 AAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTG 350093 | ||||| ||||| || |||| || |||| | || || || |||||||| || | Sbjct 425986 AGATTGACTCTCTCTTCGAGGGCATCGACTTCTACACCTCGATCACCCGTGCTCGTTTCG 426045 Query 350094 AAGA 350097 | || Sbjct 426046 AGGA 426049 >seq11 Length=758843 Score = 129 bits (142), Expect = 2e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || || || || ||||| || || || || ||||| Sbjct 158466 CATACCACCACGGAGACGGAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATC 158525 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || ||||| || || || |||||||| ||||| ||||||||||| Sbjct 158526 GGAAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCAGG 158585 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || || ||||| || || || || || || || | || || | || Sbjct 158586 TGGGATACCCTCCTTGTCTTGAATCTTGGCCTTGACGTTGTCGATAGTGTCGGAAGACTC 158645 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||| ||||| || || || ||||| |||||||| Sbjct 158646 CACCTCGAGGGTGATCGTCTTACCGGTCAGAGTCTTGACAAAGATCTGCAT 158696 Score = 122 bits (134), Expect = 3e-22 Identities = 168/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||| || || |||| || ||||| || | || ||| || ||||| || | Sbjct 158234 TTTGCATACCTCCGCGCAATCGAAGGACAAGGTGCAACGTGCTCTCCTTCTGAATGTTGT 158293 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || || || || || || || ||||| || || || || ||||| | Sbjct 158294 AGTCGGAGAGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGT 158353 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| || || || || || ||||| || || ||||| ||||| || |||| || || | Sbjct 158354 CAGGCGGGATACCCTCCTTGTCCTGGATCTTGGCTTTCACATTGTCGATCGTGTCCGAAG 158413 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || ||||| | |||||||| || || || || || ||||||||||| Sbjct 158414 ACTCGACCTCCAGTGTGATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 158468 Score = 104 bits (114), Expect = 7e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 140546 CTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAA 140605 ||| || ||||| || || || || | || || ||||| || || || || |||||||| Sbjct 158049 CTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCATCCTCCAGCTGCTTACCAGCAAA 158108 Query 140606 GATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATT 140665 ||| | || ||||| || ||||| || || || || ||||| || || || || || || Sbjct 158109 GATCAAGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 158168 Query 140666 ATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 ||||| | ||| || | || || || || |||| ||||| || || || || || || Sbjct 158169 GTCAATAGTATCCGAGGACTCGACATCGAGCGTAATGGTCTTGCCCGTGAGCGTCTTGAC 158228 Query 140726 AAAAATCTGCAT 140737 ||| || ||||| Sbjct 158229 AAAGATTTGCAT 158240 >seq1 Length=2015588 Score = 100 bits (110), Expect = 9e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 ||||||||||| | | || ||||| || ||||| ||||| || || || || || || Sbjct 1818681 ATACCACCACGCAGACGGAGGACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCC 1818622 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | || || || || || || || || || || ||||| || || ||||| ||||| Sbjct 1818621 GAAAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGG 1818562 Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687 || || || || || |||||||| || || || ||||| | || | || || | || Sbjct 1818561 GGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTTGATGGTGTCCGAGGACTCC 1818502 Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || || || |||| ||||| || ||| || Sbjct 1818501 ACCTCGAGGGTAATGGTCTTACCTGTTGGT 1818472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253060420407