Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq19 367 1e-96 seq9 107 2e-18 seq13 100 3e-16 >seq19 Length=568126 Score = 367 bits (406), Expect = 1e-96 Identities = 544/763 (71%), Gaps = 6/763 (1%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||||| |||||| | ||||||||||| | ||| | | | | | |||||| ||| Sbjct 48352 TCATGCGTGTCGCCGTCGGTATCCACGGCCAGGACATCGAGAGCGCCATTGAGACCTACA 48411 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 || | ||| |||||||||||||| |||||| | || ||||| |||||||| ||||| Sbjct 48412 ACCTCATGTCGCAAAAGTACTTTACACACGCCTCCCCCACCCTCTTCAACGCAGGTACCC 48471 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 ||||||||| | ||| |||||||| || | |||||||| ||||||||||| |||| Sbjct 48472 CGCACCCTCAGCTCTCGTCGTGCTTCCTCGTCACCATGAAGGACGACTCGATCGATGGCA 48531 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432 ||||||| ||||||||| ||||||| ||||||||| | ||||||||||| || Sbjct 48532 TCTACGACACGCTCAAGACGTGTGCCATGATCTCCAAGACCGCCGGTGGTATCGGCCTCA 48591 Query 53433 ACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492 || | | |||| | | ||| | || || || ||||| ||| | | | Sbjct 48592 ACATCCACTGCATCCGCGGCACCGGTTCCTACATTGCCGGTACCAACGGTGTCAGCAACG 48651 Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552 | |||||||| ||||||||||||||||||||||| ||||| |||||| |||||||||| Sbjct 48652 GTATCGTGCCCATGCTCCGCGTCTTCAACAACACCGCCCGCTACGTCGACCAGGGTGGCA 48711 Query 53553 GGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT 53612 ||||| || | || ||||| ||| | ||||| |||||| | ||| | | |||| Sbjct 48712 ACAAGCGTCCCGGTGCCTTTGCCATTTACGTTGAGCCATGGCACTCGGACGTCTTTGAGT 48771 Query 53613 TTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TACA 53671 | ||||| || || ||| || || | || ||| |||| ||| || || || ||| Sbjct 48772 TCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTGCGTGCCCGAGAGCTCTTCTAC- 48830 Query 53672 GCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTG 53731 || || ||| | || || ||||||||| | | ||| ||| || ||| || |||| || Sbjct 48831 GCACTCTGGGTGCCCGATCTCTTCATGAAGAGGGTCGAGCAGAACGGCGACTGGTCGCTC 48890 Query 53732 ATGTGCCCGAACGAGTGCCCCGGCCTC-CAGGGTGTCTACGGTGAGGAGTTTAACGAGAT 53790 |||||||| |||||||||||||||||| | | || |||||| || |||||| | | Sbjct 48891 ATGTGCCCCAACGAGTGCCCCGGCCTCGCTGACTG-CTACGGCGACGAGTTTGAGCGCCT 48949 Query 53791 GTATCGGACG-TACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTAT 53849 || || || |||| | ||||||| |||| | |||||||| | || | | Sbjct 48950 CTA-CGAGCGCTACGAGGCCGAGGGCCGTGCCAAGCGCACCGTCAAGGCCCAGAAGCTCT 49008 Query 53850 GGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATT 53909 || | || |||||| || ||| ||||| || | || | ||| |||||||||| Sbjct 49009 GGTACGCCATCCTCGAGTCGCAGACCGAGACCGGCAACCCCTTCATCCTCTACAAGGATG 49068 Query 53910 CGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAA 53952 | | ||| |||||||||||||||||| ||||| |||||| Sbjct 49069 CCGCTAACCGCAAGAGCAACCAGAAGAACCTCGGCACCATCAA 49111 Score = 150 bits (166), Expect = 2e-31 Identities = 530/812 (65%), Gaps = 38/812 (5%) Strand=Plus/Plus Query 55138 GAACCTGAACCGGGTCATCGACAAGAATTACTACCCGACTGAAGCGGCGCGCAAGTCCAA 55197 |||||| ||| | ||||||||| || |||||||| || | ||| || ||||| Sbjct 49268 GAACCTTAACAAGATCATCGACATCAACTACTACCCCGTCGAGGAGGCCCGTCGATCCAA 49327 Query 55198 CCTCCGGCACCGGCCCATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATGCT 55257 | | || ||||| ||||||| |||||||| ||||| | |||||| ||||||||| | Sbjct 49328 CATGCGCCACCGTCCCATCGGTATCGGTGTCCAGGGTCTTGCCGACGCCTTCATGATCAT 49387 Query 55258 CGGATTGCCCTTCGACTCGGAACCTGCTCGAGAAATTAACCAGGACATCTTC-AGTCGCA 55316 || | |||| || || ||||| | ||| | | |||||| || | || Sbjct 49388 GGGCTACGCCTTTGAGTCTCCCGAGGCTCGTCGTCTCAACGTGCATATCTTCGAGAC-CA 49446 Query 55317 TCTACTTTGCAGCGCTCGAGGAGTCGTGTCATCTGGCTATG-AGCGAGGGGACCTACGAG 55375 ||||| || || |||||| ||||| | |||||| | ||| | || ||||||||| Sbjct 49447 TCTACCACGCCGCTCTCGAGCGATCGTGCGAGCTGGCTCAGCAGC-ACGGCACCTACGAG 49505 Query 55376 ACGTTCCGTGATTCGCCAGCTGACAAGGGACTTCTCCAGTTCGATCTATGGGGCAAG--- 55432 || | | | ||||| ||| |||| || |||| ||| | |||||| Sbjct 49506 ACCTACGCCGGCTCGCCCGCTTCGCAGGGTGAGCTGCAGTACGACATGTGGGGCGTCACC 49565 Query 55433 ---TCTGACCCCATG---TTTGACAAGTTGAAGCATGACATTCACTTGTGGGGCCTACGC 55486 || |||| | | | | | || | ||| | || | | || || ||| Sbjct 49566 CCCTCGGACCTCTGGGACTGGGCCGAGCTCAAGGCCAAGATCGCCAAGCACGGTCTGCGC 49625 Query 55487 AACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAAC 55546 ||||| || || | || || ||||| ||||| ||||| ||||||| | ||| |||| Sbjct 49626 AACTCGCTTCTGCTCGCTCCCATGCCCACCGCCTCGACCAGTCAGATCCTCGGCTTCAAC 49685 Query 55547 GAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTT 55606 ||| |||||||| |||||| ||||||||||| ||| || || || |||||||| Sbjct 49686 GAGTGCTTCGAGCCTTACACGTCCAACATCTACTCGCGTCGTGTGCTCGCCGGTGAGTTC 49745 Query 55607 GTCATGATCAACAA---GCACCTCGTCAAGGACCTGCAGAAGA-TCAACAAGTGGAACCC 55662 || | ||| | ||| | || | | || || || ||||||| Sbjct 49746 CAGGTGGTGAACCCTTGGTTGCTCCGCGAGCTCGTCGAGCAGGGTCT----GTGGAACGA 49801 Query 55663 GCAGATCAAGA--CGGAT-ATTGTGCGGAACGGGGGGTCCGTCCAGAATCTG---GAGAT 55716 ||| |||| || || || | | |||| || ||| ||||||| || | || Sbjct 49802 CACGATGAAGAACCGCATCATCGCTC---ACGGCGGTTCCATCCAGAACGTGCCCGGCAT 49858 Query 55717 TCCTCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGAT 55776 || || ||||| || | ||| ||| || |||||||| |||||| | || Sbjct 49859 CCCCGACCGCATCAAGAAGCTCTACAAGACCGTCTGGGAGATCAGCCAGAAGGCCATCAT 49918 Query 55777 TGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACAT---CTT 55833 |||||| || || |||||||| | |||| |||||| ||||| || ||||| | | Sbjct 49919 CGACATGGCCGCCGACCGTGGTGCTTTCATCTGCCAGTCGCAGTCGCTCAACATTCACCT 49978 Query 55834 CATGGAGAAT-CCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGG 55892 | || | | |||| |||||| | | | |||||||||||| ||||| |||||||||| Sbjct 49979 CTCGGCGCCTACCTT---TGGCCA-GCTCACCTCGATGCACTTCTACGGCTGGAAGAAGG 50034 Query 55893 GACTCAAGACGGGTATGTACTATCTGCGGACC 55924 | |||||||| |||| ||||| ||||| ||| Sbjct 50035 GTCTCAAGACCGGTACCTACTACCTGCGTACC 50066 >seq9 Length=823499 Score = 107 bits (118), Expect = 2e-18 Identities = 328/498 (66%), Gaps = 22/498 (4%) Strand=Plus/Plus Query 74805 AGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAG 74864 || || ||||| || || |||||||| | ||| ||||||| |||||| || |||| Sbjct 593939 AGACCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAG 593998 Query 74865 AAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC 74924 ||||||||||| || ||||||||||| || || | ||||| ||| || ||| Sbjct 593999 AAGATGCCTTCAACGGCGGCAAAGGCGACGAGACGCTCGGCGAA-AGTGGCGCGCTTGTC 594057 Query 74925 ----ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGC 74980 ||||| | | ||||| || ||||| | ||||| | |||| || |||| || Sbjct 594058 GCTGATCCATCGCAGCGCCCAGTCGGCTTTCTGCTTGACGACGGGGATGGTCTCGACGGC 594117 Query 74981 TTGGAAGAG--GCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAG 75038 | ||||| ||| || || ||||| || | | |||| || | || ||| Sbjct 594118 GTCAAAGAGGAGCTCGC--GCTGCTCGGGCTCGCGAATGTAGGTGTCGATGAGGAGCGAG 594175 Query 75039 TACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCT 75098 || |||||||| || || ||| | | |||| | ||||||| | || ||||| Sbjct 594176 TAGGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGAGCCTCG 594235 Query 75099 GCAATCTGTACATC--CTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCG 75156 || || || || ||||| || | ||| ||||| ||||||| ||||| | Sbjct 594236 GCGGCTTGCACCTCGGAGCTGAAACGCTC--GACGAGGTTCTCGTTGACGATACCGTCGG 594293 Query 75157 AGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAG---TT 75213 | |||||||| || || || || |||||||||||| || | ||| |||| | Sbjct 594294 AAGCGGCGAAGAAGGCGAGGACGTGCGAGATAAAGTGGCGTTCGTTGTCGTTGAGCTTGT 594353 Query 75214 TGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA--ACTCCC 75271 ||||||| || | || ||| | | || ||||| ||| | |||||||| | || Sbjct 594354 TGTCCCAGTCGTGGAGATCCTTGGAAAGGTCGATCTCTTCGGCGGTCCAGAAGGAAGCC- 594412 Query 75272 AATC-GCCTTTTTGTACA 75288 || ||||||||||||| Sbjct 594413 --TCGGCCTTTTTGTACA 594428 >seq13 Length=657001 Score = 100 bits (110), Expect = 3e-16 Identities = 85/105 (81%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 119083 GTTGGCTAGCTTGGCACCGTATCCGTTCCGACCACCGGTCACGCGCTGCTCCTCGTCGTT 119142 |||||| |||||||||||||| ||||||| ||||||||| || ||| | ||||| Sbjct 371760 GTTGGCGAGCTTGGCACCGTAACCGTTCCTACCACCGGTGACCTTGGCCTCGTTGTCGTC 371701 Query 119143 GTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGATGAGCTCGGGGAT 119187 ||||||||| ||| | ||||| |||||||||||||||||||| Sbjct 371700 GTAGTTGGACGAGGTGAGGAGGTGACCAAAGATGAGCTCGGGGAT 371656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215528026200