Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq19 367 1e-96
seq9 107 2e-18
seq13 100 3e-16
>seq19
Length=568126
Score = 367 bits (406), Expect = 1e-96
Identities = 544/763 (71%), Gaps = 6/763 (1%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252
||||||| |||||| | ||||||||||| | ||| | | | | | |||||| |||
Sbjct 48352 TCATGCGTGTCGCCGTCGGTATCCACGGCCAGGACATCGAGAGCGCCATTGAGACCTACA 48411
Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312
|| | ||| |||||||||||||| |||||| | || ||||| |||||||| |||||
Sbjct 48412 ACCTCATGTCGCAAAAGTACTTTACACACGCCTCCCCCACCCTCTTCAACGCAGGTACCC 48471
Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372
||||||||| | ||| |||||||| || | |||||||| ||||||||||| ||||
Sbjct 48472 CGCACCCTCAGCTCTCGTCGTGCTTCCTCGTCACCATGAAGGACGACTCGATCGATGGCA 48531
Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432
||||||| ||||||||| ||||||| ||||||||| | ||||||||||| ||
Sbjct 48532 TCTACGACACGCTCAAGACGTGTGCCATGATCTCCAAGACCGCCGGTGGTATCGGCCTCA 48591
Query 53433 ACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492
|| | | |||| | | ||| | || || || ||||| ||| | | |
Sbjct 48592 ACATCCACTGCATCCGCGGCACCGGTTCCTACATTGCCGGTACCAACGGTGTCAGCAACG 48651
Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552
| |||||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||
Sbjct 48652 GTATCGTGCCCATGCTCCGCGTCTTCAACAACACCGCCCGCTACGTCGACCAGGGTGGCA 48711
Query 53553 GGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT 53612
||||| || | || ||||| ||| | ||||| |||||| | ||| | | ||||
Sbjct 48712 ACAAGCGTCCCGGTGCCTTTGCCATTTACGTTGAGCCATGGCACTCGGACGTCTTTGAGT 48771
Query 53613 TTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TACA 53671
| ||||| || || ||| || || | || ||| |||| ||| || || || |||
Sbjct 48772 TCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTGCGTGCCCGAGAGCTCTTCTAC- 48830
Query 53672 GCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTG 53731
|| || ||| | || || ||||||||| | | ||| ||| || ||| || |||| ||
Sbjct 48831 GCACTCTGGGTGCCCGATCTCTTCATGAAGAGGGTCGAGCAGAACGGCGACTGGTCGCTC 48890
Query 53732 ATGTGCCCGAACGAGTGCCCCGGCCTC-CAGGGTGTCTACGGTGAGGAGTTTAACGAGAT 53790
|||||||| |||||||||||||||||| | | || |||||| || |||||| | |
Sbjct 48891 ATGTGCCCCAACGAGTGCCCCGGCCTCGCTGACTG-CTACGGCGACGAGTTTGAGCGCCT 48949
Query 53791 GTATCGGACG-TACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTAT 53849
|| || || |||| | ||||||| |||| | |||||||| | || | |
Sbjct 48950 CTA-CGAGCGCTACGAGGCCGAGGGCCGTGCCAAGCGCACCGTCAAGGCCCAGAAGCTCT 49008
Query 53850 GGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATT 53909
|| | || |||||| || ||| ||||| || | || | ||| ||||||||||
Sbjct 49009 GGTACGCCATCCTCGAGTCGCAGACCGAGACCGGCAACCCCTTCATCCTCTACAAGGATG 49068
Query 53910 CGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAA 53952
| | ||| |||||||||||||||||| ||||| ||||||
Sbjct 49069 CCGCTAACCGCAAGAGCAACCAGAAGAACCTCGGCACCATCAA 49111
Score = 150 bits (166), Expect = 2e-31
Identities = 530/812 (65%), Gaps = 38/812 (5%)
Strand=Plus/Plus
Query 55138 GAACCTGAACCGGGTCATCGACAAGAATTACTACCCGACTGAAGCGGCGCGCAAGTCCAA 55197
|||||| ||| | ||||||||| || |||||||| || | ||| || |||||
Sbjct 49268 GAACCTTAACAAGATCATCGACATCAACTACTACCCCGTCGAGGAGGCCCGTCGATCCAA 49327
Query 55198 CCTCCGGCACCGGCCCATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATGCT 55257
| | || ||||| ||||||| |||||||| ||||| | |||||| ||||||||| |
Sbjct 49328 CATGCGCCACCGTCCCATCGGTATCGGTGTCCAGGGTCTTGCCGACGCCTTCATGATCAT 49387
Query 55258 CGGATTGCCCTTCGACTCGGAACCTGCTCGAGAAATTAACCAGGACATCTTC-AGTCGCA 55316
|| | |||| || || ||||| | ||| | | |||||| || | ||
Sbjct 49388 GGGCTACGCCTTTGAGTCTCCCGAGGCTCGTCGTCTCAACGTGCATATCTTCGAGAC-CA 49446
Query 55317 TCTACTTTGCAGCGCTCGAGGAGTCGTGTCATCTGGCTATG-AGCGAGGGGACCTACGAG 55375
||||| || || |||||| ||||| | |||||| | ||| | || |||||||||
Sbjct 49447 TCTACCACGCCGCTCTCGAGCGATCGTGCGAGCTGGCTCAGCAGC-ACGGCACCTACGAG 49505
Query 55376 ACGTTCCGTGATTCGCCAGCTGACAAGGGACTTCTCCAGTTCGATCTATGGGGCAAG--- 55432
|| | | | ||||| ||| |||| || |||| ||| | ||||||
Sbjct 49506 ACCTACGCCGGCTCGCCCGCTTCGCAGGGTGAGCTGCAGTACGACATGTGGGGCGTCACC 49565
Query 55433 ---TCTGACCCCATG---TTTGACAAGTTGAAGCATGACATTCACTTGTGGGGCCTACGC 55486
|| |||| | | | | | || | ||| | || | | || || |||
Sbjct 49566 CCCTCGGACCTCTGGGACTGGGCCGAGCTCAAGGCCAAGATCGCCAAGCACGGTCTGCGC 49625
Query 55487 AACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAAC 55546
||||| || || | || || ||||| ||||| ||||| ||||||| | ||| ||||
Sbjct 49626 AACTCGCTTCTGCTCGCTCCCATGCCCACCGCCTCGACCAGTCAGATCCTCGGCTTCAAC 49685
Query 55547 GAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTT 55606
||| |||||||| |||||| ||||||||||| ||| || || || ||||||||
Sbjct 49686 GAGTGCTTCGAGCCTTACACGTCCAACATCTACTCGCGTCGTGTGCTCGCCGGTGAGTTC 49745
Query 55607 GTCATGATCAACAA---GCACCTCGTCAAGGACCTGCAGAAGA-TCAACAAGTGGAACCC 55662
|| | ||| | ||| | || | | || || || |||||||
Sbjct 49746 CAGGTGGTGAACCCTTGGTTGCTCCGCGAGCTCGTCGAGCAGGGTCT----GTGGAACGA 49801
Query 55663 GCAGATCAAGA--CGGAT-ATTGTGCGGAACGGGGGGTCCGTCCAGAATCTG---GAGAT 55716
||| |||| || || || | | |||| || ||| ||||||| || | ||
Sbjct 49802 CACGATGAAGAACCGCATCATCGCTC---ACGGCGGTTCCATCCAGAACGTGCCCGGCAT 49858
Query 55717 TCCTCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGAT 55776
|| || ||||| || | ||| ||| || |||||||| |||||| | ||
Sbjct 49859 CCCCGACCGCATCAAGAAGCTCTACAAGACCGTCTGGGAGATCAGCCAGAAGGCCATCAT 49918
Query 55777 TGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACAT---CTT 55833
|||||| || || |||||||| | |||| |||||| ||||| || ||||| | |
Sbjct 49919 CGACATGGCCGCCGACCGTGGTGCTTTCATCTGCCAGTCGCAGTCGCTCAACATTCACCT 49978
Query 55834 CATGGAGAAT-CCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGG 55892
| || | | |||| |||||| | | | |||||||||||| ||||| ||||||||||
Sbjct 49979 CTCGGCGCCTACCTT---TGGCCA-GCTCACCTCGATGCACTTCTACGGCTGGAAGAAGG 50034
Query 55893 GACTCAAGACGGGTATGTACTATCTGCGGACC 55924
| |||||||| |||| ||||| ||||| |||
Sbjct 50035 GTCTCAAGACCGGTACCTACTACCTGCGTACC 50066
>seq9
Length=823499
Score = 107 bits (118), Expect = 2e-18
Identities = 328/498 (66%), Gaps = 22/498 (4%)
Strand=Plus/Plus
Query 74805 AGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAG 74864
|| || ||||| || || |||||||| | ||| ||||||| |||||| || ||||
Sbjct 593939 AGACCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAG 593998
Query 74865 AAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC 74924
||||||||||| || ||||||||||| || || | ||||| ||| || |||
Sbjct 593999 AAGATGCCTTCAACGGCGGCAAAGGCGACGAGACGCTCGGCGAA-AGTGGCGCGCTTGTC 594057
Query 74925 ----ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGC 74980
||||| | | ||||| || ||||| | ||||| | |||| || |||| ||
Sbjct 594058 GCTGATCCATCGCAGCGCCCAGTCGGCTTTCTGCTTGACGACGGGGATGGTCTCGACGGC 594117
Query 74981 TTGGAAGAG--GCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAG 75038
| ||||| ||| || || ||||| || | | |||| || | || |||
Sbjct 594118 GTCAAAGAGGAGCTCGC--GCTGCTCGGGCTCGCGAATGTAGGTGTCGATGAGGAGCGAG 594175
Query 75039 TACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCT 75098
|| |||||||| || || ||| | | |||| | ||||||| | || |||||
Sbjct 594176 TAGGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGAGCCTCG 594235
Query 75099 GCAATCTGTACATC--CTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCG 75156
|| || || || ||||| || | ||| ||||| ||||||| ||||| |
Sbjct 594236 GCGGCTTGCACCTCGGAGCTGAAACGCTC--GACGAGGTTCTCGTTGACGATACCGTCGG 594293
Query 75157 AGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAG---TT 75213
| |||||||| || || || || |||||||||||| || | ||| |||| |
Sbjct 594294 AAGCGGCGAAGAAGGCGAGGACGTGCGAGATAAAGTGGCGTTCGTTGTCGTTGAGCTTGT 594353
Query 75214 TGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA--ACTCCC 75271
||||||| || | || ||| | | || ||||| ||| | |||||||| | ||
Sbjct 594354 TGTCCCAGTCGTGGAGATCCTTGGAAAGGTCGATCTCTTCGGCGGTCCAGAAGGAAGCC- 594412
Query 75272 AATC-GCCTTTTTGTACA 75288
|| |||||||||||||
Sbjct 594413 --TCGGCCTTTTTGTACA 594428
>seq13
Length=657001
Score = 100 bits (110), Expect = 3e-16
Identities = 85/105 (81%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 119083 GTTGGCTAGCTTGGCACCGTATCCGTTCCGACCACCGGTCACGCGCTGCTCCTCGTCGTT 119142
|||||| |||||||||||||| ||||||| ||||||||| || ||| | |||||
Sbjct 371760 GTTGGCGAGCTTGGCACCGTAACCGTTCCTACCACCGGTGACCTTGGCCTCGTTGTCGTC 371701
Query 119143 GTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGATGAGCTCGGGGAT 119187
||||||||| ||| | ||||| ||||||||||||||||||||
Sbjct 371700 GTAGTTGGACGAGGTGAGGAGGTGACCAAAGATGAGCTCGGGGAT 371656
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215528026200
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