Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq18 178 3e-39 seq11 161 2e-34 seq1 150 4e-31 >seq18 Length=577775 Score = 178 bits (196), Expect = 3e-39 Identities = 172/221 (78%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | ||||| ||||| ||||| || || || |||||||| || || | ||| || Sbjct 203617 CGAAGACGGAGGACGAGGTGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTG 203676 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | || || || |||||||| ||||| |||||||| || || || || || || | ||| Sbjct 203677 CGGCCGTCCTCGAGCTGCTTTCCTGCAAAGATAAGTCGCTGCTGATCGGGTGGGATGCCT 203736 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 |||||||| |||||||| || ||||| ||||||||||||||| || |||||||| Sbjct 203737 TCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACCTCGAGG 203796 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || ||||||||||| ||||| | |||||| Sbjct 203797 GTGATGGTCTTGCCGGTGAGAGTCTTAACAAAGATCTGCAT 203837 Score = 165 bits (182), Expect = 2e-35 Identities = 159/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| || || ||||| || ||||| || || || | |||||| | || ||||| ||||| Sbjct 203406 GTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGAAAGGGTACGGCCGTCTTCAAGCTG 203465 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 |||||| || || ||||| || || || || || || | ||||||||||| |||||||| Sbjct 203466 CTTGCCGGCAAAAATAAGCCGCTGCTGATCGGGTGGGATGCCTTCCTTGTCTTGGATCTT 203525 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || ||||| ||||||||||||||| || |||||||||||||| ||||| || || Sbjct 203526 GGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACCTCGAGAGTGATGGTCTTGCCGGT 203585 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 |||||||| ||||| | |||||| Sbjct 203586 CAGAGTCTTGACAAAGATCTGCAT 203609 Score = 163 bits (180), Expect = 7e-35 Identities = 165/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| || |||||||| || |||| |||||| || || Sbjct 283458 AGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGTGGCCGTCC 283517 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| ||||| || ||||| || || | || ||||||||| Sbjct 283518 TCAAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 283577 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||||||||| || || |||||||||||||| ||| Sbjct 283578 TGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCGACCTCGAGAGTGATGGTC 283637 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || |||||||| ||||| || || | |||||| || Sbjct 283638 TTACCCGTGAGGGTCTTAACGAAGATCTGCATCTT 283672 >seq11 Length=758843 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || ||||| || |||||||| ||||| | |||||| | || || Sbjct 158485 AGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCC 158544 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| || || || || ||||| || | || |||||||| Sbjct 158545 TCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCAGGTGGGATACCCTCCTTGTCT 158604 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||| ||||| || || |||||||| ||||||||| Sbjct 158605 TGAATCTTGGCCTTGACGTTGTCGATAGTGTCGGAAGACTCCACCTCGAGGGTGATCGTC 158664 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || |||||||| ||||| | |||||| Sbjct 158665 TTACCGGTCAGAGTCTTGACAAAGATCTGCAT 158696 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| | ||| ||| || || ||||| || || | || || | || || Sbjct 158257 AGGACAAGGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCC 158316 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || ||||| || || || || |||||||| || | || ||||||||| Sbjct 158317 TCGAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCC 158376 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||| || ||||| ||||| || || ||||| || ||||||||| Sbjct 158377 TGGATCTTGGCTTTCACATTGTCGATCGTGTCCGAAGACTCGACCTCCAGTGTGATCGTC 158436 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| ||||| || || | |||||| Sbjct 158437 TTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 158468 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| | ||| ||| || || ||||| || |||| ||| || | ||||| Sbjct 158029 AGGACGAGGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCATCC 158088 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || || ||||| | ||| || ||||| ||||| | || ||||||||| Sbjct 158089 TCCAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC 158148 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| || || || || ||| || || ||||| || || ||| Sbjct 158149 TGGATCTTGGCCTTGACGTTGTCAATAGTATCCGAGGACTCGACATCGAGCGTAATGGTC 158208 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| ||||| ||||| | ||||| Sbjct 158209 TTGCCCGTGAGCGTCTTGACAAAGATTTGCAT 158240 >seq1 Length=2015588 Score = 150 bits (166), Expect = 4e-31 Identities = 146/188 (78%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| ||||| ||||| || |||||||| || |||| ||| || | || || Sbjct 1818663 AGGACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCGTCC 1818604 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| ||||| || |||||||| || | || ||||||||| Sbjct 1818603 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 1818544 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || | ||||||||| ||| || |||||||| || || ||| Sbjct 1818543 TGAATCTTGGCCTTGACATTGTTGATGGTGTCCGAGGACTCCACCTCGAGGGTAATGGTC 1818484 Query 211083 TTTCCCGT 211090 || || || Sbjct 1818483 TTACCTGT 1818476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159150975237185