Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq11 190 4e-43
seq18 188 1e-42
seq1 143 6e-29
seq4 87.8 4e-12
>seq11
Length=758843
Score = 190 bits (210), Expect = 4e-43
Identities = 179/228 (79%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || ||||| || | || || || ||||||||||| || |
Sbjct 158469 ACCACCACGGAGACGGAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGA 158528
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||| ||||| || || || ||||||||||| | ||| || || ||| ||
Sbjct 158529 AAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCAGGTGG 158588
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||||||||||||||| ||||| || || ||| | ||||||||||| |||| || ||
Sbjct 158589 GATACCCTCCTTGTCTTGAATCTTGGCCTTGACGTTGTCGATAGTGTCGGAAGACTCCAC 158648
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| |||||||||||||| |||| |||||| || || ||||||||
Sbjct 158649 CTCGAGGGTGATCGTCTTACCGGTCAGAGTCTTGACAAAGATCTGCAT 158696
Score = 178 bits (196), Expect = 3e-39
Identities = 176/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| |||||||| || || || || || || ||||| || || || ||||||||||| |
Sbjct 158013 ACCGCCACGCAGACGGAGGACGAGGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCCGA 158072
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| ||||| |||||||| || || || || ||||||||||| || || ||||| ||
Sbjct 158073 AAGAGTGCGACCATCCTCCAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCGGGAGG 158132
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||||||||| |||||||| || || ||| | || ||||| ||||| | |||||
Sbjct 158133 GATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATAGTATCCGAGGACTCGAC 158192
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| || || ||||| ||||| | ||||| || || || |||||
Sbjct 158193 ATCGAGCGTAATGGTCTTGCCCGTGAGCGTCTTGACAAAGATTTGCAT 158240
Score = 178 bits (196), Expect = 3e-39
Identities = 176/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| || |||| ||||| || || || |||||||| || || || ||||||||||| |
Sbjct 158241 ACCTCCGCGCAATCGAAGGACAAGGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGGA 158300
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||| ||||| || || || || || || || | || || |||||| |||
Sbjct 158301 GAGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCAGGCGG 158360
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||||||||| |||||||| ||||| || | ||||| |||||||||| |||||
Sbjct 158361 GATACCCTCCTTGTCCTGGATCTTGGCTTTCACATTGTCGATCGTGTCCGAAGACTCGAC 158420
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||||||||| || || | ||||| ||||| ||||||||
Sbjct 158421 CTCCAGTGTGATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 158468
>seq18
Length=577775
Score = 188 bits (208), Expect = 1e-42
Identities = 182/234 (78%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||||||| || |||| || | || || || |||||||||||||| |
Sbjct 283442 ACCACCACGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 283501
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| ||| |||| ||||| || || || || || ||||||| || || ||||| ||
Sbjct 283502 AAGGGTGTGGCCGTCCTCAAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCGGGGGG 283561
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| || || || | ||||| |||||||||| |||||
Sbjct 283562 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCGAC 283621
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTCAT 283105
||||||||||| ||||||||||| | ||||||||||| |||||||| || ||
Sbjct 283622 CTCGAGAGTGATGGTCTTACCCGTGAGGGTCTTAACGAAGATCTGCATCTTGAT 283675
Score = 154 bits (170), Expect = 3e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| || || || || || || || || | || ||| || |||||||||||||| |
Sbjct 203610 ACCCCCGCGAAGACGGAGGACGAGGTGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGA 203669
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||| ||||| || || || || |||||||| | || || || || ||
Sbjct 203670 AAGAGTGCGGCCGTCCTCGAGCTGCTTTCCTGCAAAGATAAGTCGCTGCTGATCGGGTGG 203729
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| || ||||||||||||||||| || || ||| | ||||| ||||| || | |||||
Sbjct 203730 GATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGAC 203789
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || || | ||||||||| || ||||||||
Sbjct 203790 CTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTAACAAAGATCTGCAT 203837
Score = 145 bits (160), Expect = 2e-29
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| ||||| || || | |||| || | ||| || || ||||| |||||||| |
Sbjct 203382 ACCTCCACGGAGACGCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGA 203441
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || ||||| || || || || || |||||||| || | || || || || ||
Sbjct 203442 AAGGGTACGGCCGTCTTCAAGCTGCTTGCCGGCAAAAATAAGCCGCTGCTGATCGGGTGG 203501
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| || ||||||||||||||||| || || ||| | ||||| ||||| || | |||||
Sbjct 203502 GATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGAC 203561
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||||||||| ||||| || |||| |||||| || || ||||||||
Sbjct 203562 CTCGAGAGTGATGGTCTTGCCGGTCAGAGTCTTGACAAAGATCTGCAT 203609
>seq1
Length=2015588
Score = 143 bits (158), Expect = 6e-29
Identities = 154/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||||||||| || || || || || | || || || |||||||||||||| |
Sbjct 1818679 ACCACCACGCAGACGGAGGACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 1818620
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|||||||||||| ||||| || || || ||||| ||||||| || || |||||| ||
Sbjct 1818619 AAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGG 1818560
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| || ||||| || || || | | ||| |||||||| | || ||
Sbjct 1818559 GATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTTGATGGTGTCCGAGGACTCCAC 1818500
Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075
||||| || || |||||||| ||
Sbjct 1818499 CTCGAGGGTAATGGTCTTACCTGT 1818476
>seq4
Length=1061034
Score = 87.8 bits (96), Expect = 4e-12
Identities = 68/81 (84%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 167288 GACGCCATAGCTCAGTTGGTTAGAGCGTTCGACTGTTAATCGAGAGGTCGTCGGTTCGAA 167347
||| |||||||||||||||||||||||| ||||||||| ||||||| ||||||||
Sbjct 405304 GACTCCATAGCTCAGTTGGTTAGAGCGTAGCACTGTTAATGCTGAGGTCGGCGGTTCGAG 405363
Query 167348 CCCGACTGGTGTCGTTTGCCC 167368
|||| |||| |||| || |||
Sbjct 405364 CCCGCCTGGGGTCGCTTTCCC 405384
Score = 86.0 bits (94), Expect = 1e-11
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 167285 ACAGACGCCATAGCTCAGTTGGTTAGAGCGTTCGACTGTTAATCGAGAGGTCGTCGGTTC 167344
|| ||| |||||||||||||||||||||||| ||||||||| ||||||| ||||||
Sbjct 153022 ACTGACTCCATAGCTCAGTTGGTTAGAGCGTAGCACTGTTAATGCTGAGGTCGGCGGTTC 152963
Query 167345 GAACCCGACTGGTGTCG 167361
|| |||| |||| ||||
Sbjct 152962 GAGCCCGCCTGGGGTCG 152946
Score = 84.2 bits (92), Expect = 5e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 167117 GACGCCATAGCTCAGTTGGTTAGAGCGTTCGACTGTTAATCGAGAGGTCGTCGGTTCGAA 167176
||| |||||||||||||||||||||||| ||||||||| ||||||| ||||||||
Sbjct 153019 GACTCCATAGCTCAGTTGGTTAGAGCGTAGCACTGTTAATGCTGAGGTCGGCGGTTCGAG 152960
Query 167177 CCCGACTGGTGTCG 167190
|||| |||| ||||
Sbjct 152959 CCCGCCTGGGGTCG 152946
Score = 84.2 bits (92), Expect = 5e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 167117 GACGCCATAGCTCAGTTGGTTAGAGCGTTCGACTGTTAATCGAGAGGTCGTCGGTTCGAA 167176
||| |||||||||||||||||||||||| ||||||||| ||||||| ||||||||
Sbjct 368543 GACTCCATAGCTCAGTTGGTTAGAGCGTAGCACTGTTAATGCTGAGGTCGGCGGTTCGAG 368602
Query 167177 CCCGACTGGTGTCG 167190
|||| |||| ||||
Sbjct 368603 CCCGCCTGGGGTCG 368616
Score = 84.2 bits (92), Expect = 5e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 167288 GACGCCATAGCTCAGTTGGTTAGAGCGTTCGACTGTTAATCGAGAGGTCGTCGGTTCGAA 167347
||| |||||||||||||||||||||||| ||||||||| ||||||| ||||||||
Sbjct 368543 GACTCCATAGCTCAGTTGGTTAGAGCGTAGCACTGTTAATGCTGAGGTCGGCGGTTCGAG 368602
Query 167348 CCCGACTGGTGTCG 167361
|||| |||| ||||
Sbjct 368603 CCCGCCTGGGGTCG 368616
Score = 84.2 bits (92), Expect = 5e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 167117 GACGCCATAGCTCAGTTGGTTAGAGCGTTCGACTGTTAATCGAGAGGTCGTCGGTTCGAA 167176
||| |||||||||||||||||||||||| ||||||||| ||||||| ||||||||
Sbjct 405304 GACTCCATAGCTCAGTTGGTTAGAGCGTAGCACTGTTAATGCTGAGGTCGGCGGTTCGAG 405363
Query 167177 CCCGACTGGTGTCG 167190
|||| |||| ||||
Sbjct 405364 CCCGCCTGGGGTCG 405377
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738274617126
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