Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11-
06] 69 sequences; 19,776,778 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq11 138 8e-28
seq18 116 3e-21
seq1 98.7 7e-16
>seq11
Length=758843
Score = 138 bits (152), Expect = 8e-28
Identities = 162/218 (74%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||||||| || || |||||| |||||||||||||||| || ||| |||| ||
Sbjct 158488 ACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCA 158547
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||||||||| | |||||||||||| | || | ||| ||||| ||
Sbjct 158548 AGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCAGGTGGGATACCCTCCTTGTCTTGA 158607
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | || ||||||| || |||||||| | || ||||||||
Sbjct 158608 ATCTTGGCCTTGACGTTGTCGATAGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTA 158667
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATGA--TGTGA 44344
|| || || ||||| || ||||| ||||||| |||||
Sbjct 158668 CCGGTCAGAGTCTTGACAAAGATCTGCATGACCTGTGA 158705
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| | ||||||||||| || |||||||| || | || ||| | || |||
Sbjct 158032 ACGAGGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCATCCTCC 158091
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || ||||||||||| |||||||| || | ||| | ||| ||||| |||
Sbjct 158092 AGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGG 158151
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | || || || | ||| || || || | |||||| |||||
Sbjct 158152 ATCTTGGCCTTGACGTTGTCAATAGTATCCGAGGACTCGACATCGAGCGTAATGGTCTTG 158211
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||| ||||| || |||||||||||
Sbjct 158212 CCCGTGAGCGTCTTGACAAAGATTTGCAT 158240
Score = 122 bits (134), Expect = 6e-23
Identities = 156/212 (74%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| | |||||||||||| || |||||||| |||| ||| || |||| ||
Sbjct 158260 ACAAGGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCG 158319
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || || || | |||||||| || | || | ||| ||||| |||
Sbjct 158320 AGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGG 158379
Query 44249 ATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
||||| |||| || ||| | || ||||| | || || ||||||| || ||||||
Sbjct 158380 ATCTT-GGCTTTCACATTGT--CGATCGTGTCCGAAGACTCGACCTCCAGTGTGATCGTC 158436
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| ||||| ||||| ||||| || |||||
Sbjct 158437 TTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 158468
>seq18
Length=577775
Score = 116 bits (128), Expect = 3e-21
Identities = 154/212 (73%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| ||| || || |||||| ||||||||||| || | || | | |||| ||
Sbjct 283460 CACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGTGGCCGTCCTC 283519
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| || || ||||||| |||||||| || | || | || ||||| |||
Sbjct 283520 AAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTG 283579
Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
||||| ||| || ||| | |||||||| | || || ||||| | || || |||
Sbjct 283580 GATCTTGGCCTTGACATTGT--CGATGGTGTCCGAAGACTCGACCTCGAGAGTGATGGTC 283637
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| |||||||||||||| |||||||| |||||
Sbjct 283638 TTACCCGTGAGGGTCTTAACGAAGATCTGCAT 283669
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || || ||||| ||||||||||| |||| || ||| |||| ||
Sbjct 203629 ACGAGGTGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCG 203688
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || |||||||| | ||||||||||| | || | |||||||| ||
Sbjct 203689 AGCTGCTTTCCTGCAAAGATAAGTCGCTGCTGATCGGGTGGGATGCCTTCCTTGTCTTGG 203748
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||||||| | ||| || ||||| | || || |||||
Sbjct 203749 ATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTG 203808
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| ||||| || ||||| |||||
Sbjct 203809 CCGGTGAGAGTCTTAACAAAGATCTGCAT 203837
Score = 109 bits (120), Expect = 4e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184
||| |||| ||| ||||| |||||| ||||| ||||| |||| || || ||||
Sbjct 203397 CAAAACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGAAAGGGTACGGCCGTC 203456
Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244
|| |||||||| |||||||| || | ||||||||||| | || | |||||||| ||
Sbjct 203457 TTCAAGCTGCTTGCCGGCAAAAATAAGCCGCTGCTGATCGGGTGGGATGCCTTCCTTGTC 203516
Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304
||||| ||| | | | |||||||| | ||| || ||||| | || || ||
Sbjct 203517 TTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACCTCGAGAGTGATGGT 203576
Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| || || || ||||| || ||||| |||||
Sbjct 203577 CTTGCCGGTCAGAGTCTTGACAAAGATCTGCAT 203609
>seq1
Length=2015588
Score = 98.7 bits (108), Expect = 7e-16
Identities = 135/187 (72%), Gaps = 4/187 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || || |||||| ||||||||||| || | || ||| |||| ||
Sbjct 1818660 ACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCGTCCTCG 1818601
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||| ||||||| |||||||| || | || | || ||||| |||
Sbjct 1818600 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGA 1818541
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || |||| |||||||| | ||| |||||||| | ||||| ||||
Sbjct 1818540 ATCTTGGCCTTGACATTGTT--GATGGTGTCCGAGGACTCCACCTCGAGGGTAATGGTCT 1818483
Query 44307 TTCCCGT 44313
| || ||
Sbjct 1818482 TACCTGT 1818476
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990097270573
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |