Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq11 138 8e-28 seq18 116 3e-21 seq1 98.7 7e-16 >seq11 Length=758843 Score = 138 bits (152), Expect = 8e-28 Identities = 162/218 (74%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || || |||||| |||||||||||||||| || ||| |||| || Sbjct 158488 ACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCA 158547 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||||||||| | |||||||||||| | || | ||| ||||| || Sbjct 158548 AGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCAGGTGGGATACCCTCCTTGTCTTGA 158607 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | || ||||||| || |||||||| | || |||||||| Sbjct 158608 ATCTTGGCCTTGACGTTGTCGATAGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTA 158667 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATGA--TGTGA 44344 || || || ||||| || ||||| ||||||| ||||| Sbjct 158668 CCGGTCAGAGTCTTGACAAAGATCTGCATGACCTGTGA 158705 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| | ||||||||||| || |||||||| || | || ||| | || ||| Sbjct 158032 ACGAGGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCATCCTCC 158091 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || ||||||||||| |||||||| || | ||| | ||| ||||| ||| Sbjct 158092 AGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGG 158151 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | || || || | ||| || || || | |||||| ||||| Sbjct 158152 ATCTTGGCCTTGACGTTGTCAATAGTATCCGAGGACTCGACATCGAGCGTAATGGTCTTG 158211 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| ||||| || ||||||||||| Sbjct 158212 CCCGTGAGCGTCTTGACAAAGATTTGCAT 158240 Score = 122 bits (134), Expect = 6e-23 Identities = 156/212 (74%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| | |||||||||||| || |||||||| |||| ||| || |||| || Sbjct 158260 ACAAGGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCG 158319 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || || || | |||||||| || | || | ||| ||||| ||| Sbjct 158320 AGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGG 158379 Query 44249 ATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| |||| || ||| | || ||||| | || || ||||||| || |||||| Sbjct 158380 ATCTT-GGCTTTCACATTGT--CGATCGTGTCCGAAGACTCGACCTCCAGTGTGATCGTC 158436 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| ||||| ||||| ||||| || ||||| Sbjct 158437 TTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 158468 >seq18 Length=577775 Score = 116 bits (128), Expect = 3e-21 Identities = 154/212 (73%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||| || || |||||| ||||||||||| || | || | | |||| || Sbjct 283460 CACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGTGGCCGTCCTC 283519 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || || ||||||| |||||||| || | || | || ||||| ||| Sbjct 283520 AAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTG 283579 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||| || ||| | |||||||| | || || ||||| | || || ||| Sbjct 283580 GATCTTGGCCTTGACATTGT--CGATGGTGTCCGAAGACTCGACCTCGAGAGTGATGGTC 283637 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||||||||||||| |||||||| ||||| Sbjct 283638 TTACCCGTGAGGGTCTTAACGAAGATCTGCAT 283669 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || || ||||| ||||||||||| |||| || ||| |||| || Sbjct 203629 ACGAGGTGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCG 203688 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||| | ||||||||||| | || | |||||||| || Sbjct 203689 AGCTGCTTTCCTGCAAAGATAAGTCGCTGCTGATCGGGTGGGATGCCTTCCTTGTCTTGG 203748 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||| | ||| || ||||| | || || ||||| Sbjct 203749 ATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTG 203808 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||| || ||||| ||||| Sbjct 203809 CCGGTGAGAGTCTTAACAAAGATCTGCAT 203837 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 ||| |||| ||| ||||| |||||| ||||| ||||| |||| || || |||| Sbjct 203397 CAAAACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGAAAGGGTACGGCCGTC 203456 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 || |||||||| |||||||| || | ||||||||||| | || | |||||||| || Sbjct 203457 TTCAAGCTGCTTGCCGGCAAAAATAAGCCGCTGCTGATCGGGTGGGATGCCTTCCTTGTC 203516 Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 ||||| ||| | | | |||||||| | ||| || ||||| | || || || Sbjct 203517 TTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACCTCGAGAGTGATGGT 203576 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || || ||||| || ||||| ||||| Sbjct 203577 CTTGCCGGTCAGAGTCTTGACAAAGATCTGCAT 203609 >seq1 Length=2015588 Score = 98.7 bits (108), Expect = 7e-16 Identities = 135/187 (72%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || || |||||| ||||||||||| || | || ||| |||| || Sbjct 1818660 ACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCGTCCTCG 1818601 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||||| |||||||| || | || | || ||||| ||| Sbjct 1818600 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGA 1818541 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || |||| |||||||| | ||| |||||||| | ||||| |||| Sbjct 1818540 ATCTTGGCCTTGACATTGTT--GATGGTGTCCGAGGACTCCACCTCGAGGGTAATGGTCT 1818483 Query 44307 TTCCCGT 44313 | || || Sbjct 1818482 TACCTGT 1818476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990097270573