Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq1 152 6e-32
>seq1
Length=2009762
Score = 152 bits (168), Expect = 6e-32
Identities = 453/699 (65%), Gaps = 40/699 (6%)
Strand=Plus/Minus
Query 145604 TGAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGGGAAAGGGCCGGGGGC 145663
||||||| || || |||| | |||| || ||||| |||| |||||| | ||
Sbjct 1711192 TGAAGTCGTCAATATCCTTGATATCCCTCCTAATGTTGAGCTTGGGGAAGGGCAGAGGAT 1711133
Query 145664 TCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCA 145723
|| || ||| | ||||| || || ||||| | |||||||||||| || ||||
Sbjct 1711132 CTCTCTCCAACTGCACCTTCAACGGTTCTACGTGATCCTTGTAGACGTGCGCATCGCCCA 1711073
Query 145724 GGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCA 145783
| || | | || || || ||| | || | | ||||| ||||||||||| ||
Sbjct 1711072 TGGCGAGCACCAATTCTTTAGGTTCGCAATCGGTCACCTTGGCGATCATGTAGGTCAACA 1711013
Query 145784 GGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACA 145843
| | |||||| || |||||||| || || |||| || | || | || ||||||||||
Sbjct 1711012 GAGCGTAGCTAGCAATGTTGAACGGAACGCCCAAACCGAGATCGCATGAACGCTGGTACA 1710953
Query 145844 GCTGGCAGGAGAGCT---------CCCCGCC---------------------CGCCACGT 145873
|| || ||||| | || |||| || |||
Sbjct 1710952 TTTGACACGAGAGGTGCTTTTTGCCCTCGCCGCGGGCGTAGGCGTCGAGGTTCGAGACGA 1710893
Query 145874 AGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTC 145932
||||||| ||| | | |||||| |||||||| ||||| |||||| ||||||
Sbjct 1710892 AGAACTGCGCAAAC-ATGTGGCACGGCGGCAGCGCCATCAGTTCGAGGTCCTTGGGGTTC 1710834
Query 145933 CAGGCGGTGAGGACGAGCCTCCTGCTCTCGG---GGTTCCTCTTGATCTCCCCTATCAGG 145989
|||||| |||| | || | | | |||| |||| ||||||||| | ||||
Sbjct 1710833 CAGGCGCTGAGCAGGATGCGACGG---TCGGTAGGGTTGTTCTTGATCTTGTCGATCACT 1710777
Query 145990 TCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCC 146049
| ||| || || ||||| || || ||| | || | | | || |||| | ||
Sbjct 1710776 TGAGCGAGTTGATCGACGCCTTGACCGGTGTAGTTGGTATCGCAATCTGTGTACTCTGCG 1710717
Query 146050 CCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC-CCTGTGCCC 146108
|| ||||| | ||| ||||| ||||||||||| |||| ||| || ||| | |||
Sbjct 1710716 CCAAAGTGTCGCCATTGGAAACCGTAGACGGGGCCCAAGTCGCC-TTCTCTGCGGTGAGA 1710658
Query 146109 CAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCT 146168
||||||| | | ||||||| || || || |||||| |||||||||| | |||||| |
Sbjct 1710657 CAGCCCGCGCGAGTCGAGGAATTCACGCGATCCGTTGCCGTCCCAGATGTGTACGCCCTT 1710598
Query 146169 CGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGAC 146228
| | |||| || || || || || | |||||||| ||||| ||||| ||
Sbjct 1710597 ATCTGTGAGCAGTTTCGAATCGGTCTTGCCAGCAACAAACCAGAGGAGCTCCTCGAGCAC 1710538
Query 146229 CCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAA 146267
|| | | ||||| | ||||||||| ||||| || ||
Sbjct 1710537 GCCACGGAAAAAGACACGCTTGGTGGTGAGCAGAGGCAA 1710499
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590076600849080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |