Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1 152 6e-32 >seq1 Length=2009762 Score = 152 bits (168), Expect = 6e-32 Identities = 453/699 (65%), Gaps = 40/699 (6%) Strand=Plus/Minus Query 145604 TGAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGGGAAAGGGCCGGGGGC 145663 ||||||| || || |||| | |||| || ||||| |||| |||||| | || Sbjct 1711192 TGAAGTCGTCAATATCCTTGATATCCCTCCTAATGTTGAGCTTGGGGAAGGGCAGAGGAT 1711133 Query 145664 TCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCA 145723 || || ||| | ||||| || || ||||| | |||||||||||| || |||| Sbjct 1711132 CTCTCTCCAACTGCACCTTCAACGGTTCTACGTGATCCTTGTAGACGTGCGCATCGCCCA 1711073 Query 145724 GGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCA 145783 | || | | || || || ||| | || | | ||||| ||||||||||| || Sbjct 1711072 TGGCGAGCACCAATTCTTTAGGTTCGCAATCGGTCACCTTGGCGATCATGTAGGTCAACA 1711013 Query 145784 GGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACA 145843 | | |||||| || |||||||| || || |||| || | || | || |||||||||| Sbjct 1711012 GAGCGTAGCTAGCAATGTTGAACGGAACGCCCAAACCGAGATCGCATGAACGCTGGTACA 1710953 Query 145844 GCTGGCAGGAGAGCT---------CCCCGCC---------------------CGCCACGT 145873 || || ||||| | || |||| || ||| Sbjct 1710952 TTTGACACGAGAGGTGCTTTTTGCCCTCGCCGCGGGCGTAGGCGTCGAGGTTCGAGACGA 1710893 Query 145874 AGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTC 145932 ||||||| ||| | | |||||| |||||||| ||||| |||||| |||||| Sbjct 1710892 AGAACTGCGCAAAC-ATGTGGCACGGCGGCAGCGCCATCAGTTCGAGGTCCTTGGGGTTC 1710834 Query 145933 CAGGCGGTGAGGACGAGCCTCCTGCTCTCGG---GGTTCCTCTTGATCTCCCCTATCAGG 145989 |||||| |||| | || | | | |||| |||| ||||||||| | |||| Sbjct 1710833 CAGGCGCTGAGCAGGATGCGACGG---TCGGTAGGGTTGTTCTTGATCTTGTCGATCACT 1710777 Query 145990 TCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCC 146049 | ||| || || ||||| || || ||| | || | | | || |||| | || Sbjct 1710776 TGAGCGAGTTGATCGACGCCTTGACCGGTGTAGTTGGTATCGCAATCTGTGTACTCTGCG 1710717 Query 146050 CCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC-CCTGTGCCC 146108 || ||||| | ||| ||||| ||||||||||| |||| ||| || ||| | ||| Sbjct 1710716 CCAAAGTGTCGCCATTGGAAACCGTAGACGGGGCCCAAGTCGCC-TTCTCTGCGGTGAGA 1710658 Query 146109 CAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCT 146168 ||||||| | | ||||||| || || || |||||| |||||||||| | |||||| | Sbjct 1710657 CAGCCCGCGCGAGTCGAGGAATTCACGCGATCCGTTGCCGTCCCAGATGTGTACGCCCTT 1710598 Query 146169 CGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGAC 146228 | | |||| || || || || || | |||||||| ||||| ||||| || Sbjct 1710597 ATCTGTGAGCAGTTTCGAATCGGTCTTGCCAGCAACAAACCAGAGGAGCTCCTCGAGCAC 1710538 Query 146229 CCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAA 146267 || | | ||||| | ||||||||| ||||| || || Sbjct 1710537 GCCACGGAAAAAGACACGCTTGGTGGTGAGCAGAGGCAA 1710499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076600849080