Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq19 181 2e-40
>seq19
Length=580969
Score = 181 bits (200), Expect = 2e-40
Identities = 781/1205 (65%), Gaps = 41/1205 (3%)
Strand=Plus/Minus
Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877
||| | ||||| | ||||| ||||| ||| || || |||||| || | ||||||
Sbjct 521047 TACAACTTCTTCGGCTTCAAGACGCTCGAGCGCTCCTACCTCCTCCGCATCAACGGCAAG 520988
Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937
||| || || ||||||||| | ||||| || || ||||| || ||| | |||
Sbjct 520987 GTCGCAGAGCGTCCCCAGCACATGCTCATGCGTGTCGCCGTCGGTATCCACGGCCAGGAC 520928
Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997
|| ||||||| | ||||| |||| | ||| || | | ||||| ||| |
Sbjct 520927 ATCGAGAGCGCCATTGAGACCTACAACCTCATGTCGCAAAAGTACTTTACACACGCCTCC 520868
Query 248998 CCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCC 249057
|| || ||||||||||| |||||| || |||||| |||||||| || | ||
Sbjct 520867 CCCACCCTCTTCAACGCAGGTACCCCGCACCCTCAGCTCTCGTCGTGCTTCCTCGTCACC 520808
Query 249058 ATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAAGATT 249114
||| | |||||||| |||| ||||| || |||||||| | ||||| || | |||
Sbjct 520807 ATGAAGGACGACTCGATCGATGGCATCTACGACACGCTCA---AGACGTGTGCCATGATC 520751
Query 249115 TCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTAC 249174
|| || ||| || || ||||| ||| | || | |||||| | | ||||| |||
Sbjct 520750 TCCAAGACCGCCGGTGGTATCGGCCTCAACATCCACTGCATCCGCGGCACCGGTTCCTAC 520691
Query 249175 ATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCC 249234
|| ||||| || || ||||| | |||||||| ||| | || || ||| | |
Sbjct 520690 ATTGCCGGTACCAACGGTGTCAGCAACGGTATCGTGCCCATGCTCCGCGTCTTCAACAAC 520631
Query 249235 ACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTTG 249291
|||||| | | | || |||||| || | || || | || ||||| || |
Sbjct 520630 ACCGCCCGCTACGTCGACCAGGGTGGCAACAAGCGTCCCGGTGCCTTTGCCATTTACGTT 520571
Query 249292 GAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAG 249351
|| |||||| | || | || |||||||| ||| | |||||| ||||||| |||
Sbjct 520570 GAGCCATGGCACTCGGACGTCTTTGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAG 520511
Query 249352 CTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGC 249411
|| | || || || |||||||||| || ||||| |||| | |||||| |
Sbjct 520510 GAGGTGCGTGCCCGAGAGCTCTTCTACGCACTCTGGGTGCCCGATCTCTTCATGAAGAGG 520451
Query 249412 GTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGA-CGCCCCGGACCTCATCGA 249470
||| || ||||||| ||| |||| | | || ||| ||||||| |||| ||
Sbjct 520450 GTCGAGCAGAACGGCGACTGGTCGCTCATGTGCCCCAACGAGTGCCCCGG-CCTCGCTGA 520392
Query 249471 TCTAC-ACGGCGCCGACTTCGACCAAGCCTATA--AGAAATACGAATCCAACGGCATCGG 249527
|| | |||||| ||| || || | |||| || || ||||| || | ||| |
Sbjct 520391 -CTGCTACGGCGACGAGTTTGAGC--GCCTCTACGAGCGCTACGAGGCCGAGGGCCGTGC 520335
Query 249528 CAAG---ACAATCAAGGCTCGGACCCT-TTTTGCGAAGGTGGTGGAGTCCCAGATAGAGA 249583
|||| || ||||||| | || || | | || | | ||||| |||| ||||
Sbjct 520334 CAAGCGCACCGTCAAGGCCCAGAAGCTCTGGTACG-CCATCCTCGAGTCGCAGACCGAGA 520276
Query 249584 CAGGGGGGCCGTATTAT-TTGTTCAAAGACGCGTGCAACGCCAAGAGTAACCAACGGCAT 249642
| || || | | || | | ||| || || ||| |||||| ||||| | |
Sbjct 520275 CCGGCAACCCCT-TCATCCTCTACAAGGATGCCGCTAACCGCAAGAGCAACCAGAAGAAC 520217
Query 249643 CTTGGTACCATCCGCTCGTCAAATCTCTGTGCA--GAGGTGATTCAATACTCGTCCAAGG 249700
|| || |||||| | || || || |||||| ||| | || | ||| || |
Sbjct 520216 CTCGGCACCATCAAGTGCTCCAA-CT-TGTGCACCGAGATTATCGAGTACAGCGCCCCCG 520159
Query 249701 AGGAGATTGCCGTCTGCAACCTGGCAAGCATCAATCTCGTGAGGCACGT-GAGGGCG--G 249757
| ||| | || ||||||||| |||| ||| ||| | | | || || |
Sbjct 520158 ACGAGGTGGCTGTCTGCAACTTGGCCTCGATCGCCCTCCCCACCTTCATCGACCCCGTCG 520099
Query 249758 ACAGGACGTTCGACTTCGAGCGTCTTCACCGGACGGCGAAACAGGCGAT---CAAAAACC 249814
|| ||||| ||||||| | ||||| ||| || | || | |||| || ||| ||||
Sbjct 520098 CCAAGACGTACGACTTCAAACGTCTGCAC--GAGGTCGCCA-AGGCCATCTGCAAGAACC 520042
Query 249815 TCAACAAGGTGATTGATGTCAATTTTTACCCCCTTGAGGAATGCAGGTTG-TCCAACATG 249873
| |||||| | || || |||| | |||||| | |||| | || || | |||||||||
Sbjct 520041 TTAACAAGATCATCGACATCAACTACTACCCCGTCGAGG-AGGCCCGTCGATCCAACATG 519983
Query 249874 AAGCACCGTCCATGTGGGCTGGGCGTTCAGGCACTGCACGACGTCTACATGGTGATGGGA 249933
|||||||| || | || || |||| || ||||| || |||| | |||||
Sbjct 519982 CGCCACCGTCCCATCGGTATCGGTGTCCAGGGTCTTGCCGACGCCTTCATGATCATGGGC 519923
Query 249934 TTCCCCTTCGAGTCAGAGGAGGCAGCGACG-CTAAATAAACAGATTTTCGAGACCATCTA 249992
| | |||| ||||| ||||| || || || || || || ||||||||||||||
Sbjct 519922 TACGCCTTTGAGTCTCCCGAGGC-TCGTCGTCTCAACGTGCATATCTTCGAGACCATCTA 519864
Query 249993 TCACG 249997
||||
Sbjct 519863 CCACG 519859
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073766028543936
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