Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq8 138 2e-27
>seq8
Length=837966
Score = 138 bits (152), Expect = 2e-27
Identities = 376/571 (66%), Gaps = 16/571 (3%)
Strand=Plus/Minus
Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019
|| || || ||| ||||||||| ||||| | || || |||||||| || |||||
Sbjct 244930 CAGGCAAAGTCGGTGTGCAGACCTTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGA 244871
Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079
|||||||| || || ||||| || ||||| || ||||| || || || || || ||||||
Sbjct 244870 CCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAG 244811
Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGC---TGTCATGT 50136
|| ||||| || ||||||||||| || || | ||| | || |||||| ||||
Sbjct 244810 ATGCCTTCAACGGCGGCAAAGGCGACGAGACGCTCGGCGAAAGTGGCGCGCTTGTCGCTG 244751
Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196
||||| | ||||| ||||| |||| || || || || || || | ||| | |
Sbjct 244750 ATCCATCGCAGCGCCCAGTCGGCTTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTCA 244691
Query 50197 AAGAGATAGtttttttCATTACT----ATCTTTAACATAAGTATCGATCAAAAGACTATA 50252
||||| || | | | || || || || || ||||| | || ||
Sbjct 244690 AAGAG-GAG---CTCGCGCTGCTCGGGCTCGCGAATGTAGGTGTCGATGAGGAGCGAGTA 244635
Query 50253 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 50312
| ||||| || ||||| || || ||||| || |||||||| || | ||||||||
Sbjct 244634 GGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGAGCCTCGGC 244575
Query 50313 AATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGC 50372
||||| || | | || || || | | || || || || || ||||| ||
Sbjct 244574 GGCTTGCACCTCGGAGCTGAAACGCTCGACGAGGTTCTCGTTGACGATACCGTCGGAAGC 244515
Query 50373 TGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATT--- 50429
|| || || || | || || ||||| || ||||||| | || || ||
Sbjct 244514 GGCGAAGAAGGCGAGGACGTGCGAGATAAAGTGGCGTTCGTTGTCGTTGAGCTTGTTGTC 244455
Query 50430 CCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGC 50489
||| || | || ||| || || | || | ||||| | ||||| || || ||||| ||
Sbjct 244454 CCAGTCGTGGAGATCCTTGGAAAGGTCGATCTCTTCGGCGGTCCAGAAGGAAGCCTCGGC 244395
Query 50490 CTTTTTATACATATTCCAGA--TGTCATGAT 50518
|||||| ||||| | ||||| ||| |||||
Sbjct 244394 CTTTTTGTACATTTGCCAGATCTGTGATGAT 244364
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268557584280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |