Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq6 152 8e-33 >seq6 Length=1032954 Score = 152 bits (168), Expect = 8e-33 Identities = 182/246 (74%), Gaps = 1/246 (0%) Strand=Plus/Minus Query 16447 CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCG 16506 ||||||| | ||||| |||||||| || ||||||||||| |||||||| ||||| || || Sbjct 705949 CAGATCT-TGCGAGACAACATCCAGGGTATCACCAAGCCCGCTATCCGACGTCTCGCGCG 705891 Query 16507 TCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAA 16566 ||||||||| ||||||||| ||||||| | |||| || |||| |||| ||| | || Sbjct 705890 TCGTGGTGGTGTCAAGCGTATCTCTGGTCTCATCTACGACGAGACCCGTGGTGTGCTCAA 705831 Query 16567 GATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAA 16626 | |||||||| || | || |||| || | || ||| || |||||||| || || || Sbjct 705830 GCTCTTCCTCGAGTCGGTCATCCGCGACTCAGTCACCTACACTGAGCACGCCAAGCGCAA 705771 Query 16627 GACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGG 16686 ||| || || || | || | ||||| || | || || || ||||| | | || || Sbjct 705770 GACCGTTACTTCGCTCGACGTTGTCTACGCTCTCAAGCGCCAGGGCCGCACCCTCTACGG 705711 Query 16687 TTTTGG 16692 ||| || Sbjct 705710 TTTCGG 705705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075175313711