Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq8 96.9 3e-15
>seq8
Length=837966
Score = 96.9 bits (106), Expect = 3e-15
Identities = 130/179 (73%), Gaps = 4/179 (2%)
Strand=Plus/Minus
Query 120325 GCTCGATGATGTTAGTGTTCACGATGACGTCGGCGGCAGCGAAAAACGCGAGAACGTGCT 120384
|||||| || ||| ||| ||||| |||||| || ||||| || ||||| ||||||
Sbjct 244551 GCTCGACGAGGTTCTCGTTGACGATACCGTCGGAAGCGGCGAAGAAGGCGAGGACGTGCG 244492
Query 120385 TAAGAAAAAAT--CGTTCTTTATCGTTCAGTTTTTTGTTCCAATCGTCAAAGTCCTTGGA 120442
||| ||| | ||||| || ||||| || || |||| ||| |||| | ||||||||
Sbjct 244491 --AGATAAAGTGGCGTTCGTTGTCGTTGAGCTTGTTGTCCCAGTCGTGGAGATCCTTGGA 244434
Query 120443 CATGTCGATCTCTTCGACTTTCCAGTGACAATCGACCGCTTTCTTGTACGATTGCCAGA 120501
| ||||||||||||| | ||||| || | | || || |||||| ||||||||
Sbjct 244433 AAGGTCGATCTCTTCGGCGGTCCAGAAGGAAGCCTCGGCCTTTTTGTACATTTGCCAGA 244375
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478662238451440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |