Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq19 253 5e-62
>seq19
Length=580969
Score = 253 bits (280), Expect = 5e-62
Identities = 1152/1799 (64%), Gaps = 53/1799 (3%)
Strand=Plus/Minus
Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450
||||| | |||||| | ||| |||||||| || ||||| || | | | ||
Sbjct 521038 TTCGGCTTCAAGACGCTCGAGCGCTCCTACCTCCTCCGCATCAACGGCAAGGTCGCAGAG 520979
Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510
|| || ||||| ||| | |||||||| || | |||||||| ||| ||| | || |
Sbjct 520978 CGTCCCCAGCACATGCTCATGCGTGTCGCCGTCGGTATCCACGGCCAGGACATCGAGAGC 520919
Query 363511 GCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCACGCCAACAA 363568
|| ||||| || || || || | || || ||| || || |||||| | || ||
Sbjct 520918 GCCATTGAGACCTACAACCTCAT--GTCGCAAAAGTACTTTACACACGCCTCCCCCACCC 520861
Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628
| | ||| || || || | | || ||| | || || ||||| || | | |||||||
Sbjct 520860 TCTTCAACGCAGGTACCCCGCACCCTCAGCTCTCGTCGTGCTTCCTCGTCACCATGAAGG 520801
Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688
|||| || ||||| || |||| ||||| || |||| ||||| | || ||||||| |
Sbjct 520800 ACGACTCGATCGATGGCATCTACGACACGCTCAAGACGTGTGCCATGATCTCCAAGACCG 520741
Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG-CACAGAACAGTT---ACATTCGC 363744
| || || || || | |||||| | || | ||| | ||| ||||| |
Sbjct 520740 CCGGTGGTATCGGCCTCAACATCCACTGCATCCGCGGCACCG----GTTCCTACATTGCC 520685
Query 363745 GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCG 363804
|| || || | || || | || |||||||| || || || |||| || ||
Sbjct 520684 GGTACCAACGGTGTCAGCAACGGTATCGTGCCCATGCTCCGCGTCTTCAACAACACCGCC 520625
Query 363805 AGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCT 363864
| ||||||||||||||||| ||||| || || ||||| || || | |||||
Sbjct 520624 CGCTACGTCGACCAGGGTGGCAACAAGCGTCCCGGTGCCTTTGCCATTTACGTTGAGCCA 520565
Query 363865 CATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTG 363924
|| | || | |||||||| || || ||||| || ||| || || ||||| ||
Sbjct 520564 TGGCACTCGGACGTCTTTGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTG 520505
Query 363925 CGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAG 363984
||||| || || || ||||| ||||| ||||| | || | || |||||| | || |||
Sbjct 520504 CGTGCCCGAGAGCTCTTCTACGCACTCTGGGTGCCCGATCTCTTCATGAAGAGGGTCGAG 520445
Query 363985 GCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATG 364043
||| | | ||||| ||| | ||||| |||| || || || || | || |
Sbjct 520444 -CAGAACGGCGACTGGTCGCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCTGACTGCTA 520386
Query 364044 GGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAG-- 364101
|| ||||| | || || ||||| || || | ||||| || |||
Sbjct 520385 CGGCGACGAGTTTGAGCGCCTCTACGAGCGCTACGAGGCCGAGGGCCGTGCC---AAGCG 520329
Query 364102 -ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAAC 364160
|| | || |||||||| |||| |||||| | || ||||||| ||||| || |
Sbjct 520328 CACCGTCAAGGCCCAGAAGCTCTGGTACGCCATCCTCGAGTCGCAGACCGAGACCGGCAA 520269
Query 364161 ACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTAC 364220
|||| || | ||||| ||| | ||||||||| ||||||| || |||| || ||
Sbjct 520268 CCCCTTCATCCTCTACAAGGATGCCGCTAACCGCAAGAGCAACCAGAAGAACCTCGGCAC 520209
Query 364221 AATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGC 364280
|| || |||| | || ||||||||||| || |||| ||| ||||||||| ||
Sbjct 520208 CATCAAGTGCTCCAACTTGTGCACCGAGATTATCGAGTACAGCGCCCCCGACGAGGTGGC 520149
Query 364281 CGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGT------ACTTT 364334
|| || ||| | || |||||||| || || | || | | | || |
Sbjct 520148 TGTCTGCAACTTGGCCTCGATCGCCCTCCCCACCTTCATCGACCCCGTCGCCAAGACGTA 520089
Query 364335 TGACCACCAGCATCTTTATGACGTAACCTAT--CATGCTACTTGCAATCTCGACAAGGTT 364392
||| | | | ||| | || || || | ||| || | | || || ||||| |
Sbjct 520088 CGACTTCAAACGTCTGCACGAGGTCGCCAAGGCCAT-CTGCAAG-AACCTTAACAAGATC 520031
Query 364393 ATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCG 364452
||||||| || || || || | || ||| || || || ||||| || || ||
Sbjct 520030 ATCGACATCAACTACTACCCCGTCGAGGAGGCCCGTCGATCCAACATGCGCCACCGTCCC 519971
Query 364453 ATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGAT 364512
|| ||| | ||||| ||||| || || |||| || ||||| | || |||||
Sbjct 519970 ATCGGTATCGGTGTCCAGGGTCTTGCCGACGCCTTCATGATCATGGGCTACGCCTTTGAG 519911
Query 364513 TCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAAT- 364571
|| || || |||||| ||| || | | ||||| || || || || ||||| |
Sbjct 519910 TCTCCCGAGGCTCGTCGTCTCAACGTGCATATCTTCGAGACCATCTACCACGCCGCTCTC 519851
Query 364572 GACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCC 364631
|| | | |||| || |||| | | || | ||| || || | || || ||
Sbjct 519850 GAGCGAT-CGTGCGAGCTGGCTCAGCAGCACGGCACCTACGAGACCTACGCCGGCTCGCC 519792
Query 364632 TCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAA 364691
||||||||| | | |||| || | ||| ||||| || || | || ||| |
Sbjct 519791 CGCTTCGCAGGGTGAGCTGCAGTACGACATGTGGGC-GTCACCCCCTCGGACCTCTGGGA 519733
Query 364692 CTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGC 364751
||||| ||| |||| | ||||| ||| |||||||| || | ||
Sbjct 519732 CTGGGCCGAGCTCAAGGCCAAGATCGCCAAGCACGGTCTGCGCAACTCGCTTCTGCTCGC 519673
Query 364752 GCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTT 364811
||||||||||| || || || ||||||||||| ||||||||||||||| || |
Sbjct 519672 TCCCATGCCCACCGCCTCGACCAGTCAGATCCTCGGCTTCAACGAGTGCTTCGAGCC--T 519615
Query 364812 TACAAG--CAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAG 364869
|||| | ||| | || || || || || || |||| || || | ||| || ||
Sbjct 519614 TACACGTCCAACATCTACTCGCGTCGTGTGCTCGCCGGTGAGTTCCAGGTGGTGAACCCT 519555
Query 364870 TACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATC 364929
| | || || || ||| | || |||||| |||| ||||||||| |||
Sbjct 519554 TGGTTGCTCCGCGAGCTCGTCGAGCAGGGTCTGTGGAACGACACGATGAAGAACCGCATC 519495
Query 364930 ATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGA--AGATC-TGAAGCCT 364986
||||| ||||| | |||||| | || || | || || ||| |||||
Sbjct 519494 ATCGCTCACGGCGGTTCCATCCAGAACGTGCCCGGCATCCCCGACCGCATCAAGAAGC-- 519437
Query 364987 ATTTACAAAACCGTATGGGAAAT-TTCCATGCGAA--CTCTCATTGATATGGCGGCCGAT 365043
| ||||| ||||| ||||| || ||| ||| | |||| || ||||| |||||
Sbjct 519436 -TCTACAAGACCGTCTGGGAGATCAGCCA---GAAGGCCATCATCGACATGGCCGCCGAC 519381
Query 365044 CGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTC--AGCCAACCT 365101
|| |||||||| ||||| ||| |||||| | ||| ||||| ||| ||| ||||
Sbjct 519380 CGTGGTGCTTTCATCTGCCAGTCGCAGTCGCTCAAC--ATTCACCTCTCGGCGCCTACCT 519323
Query 365102 CCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGGTGCC 365160
| | |||| || || ||||| |||||||| ||||| ||||| ||||| ||| ||
Sbjct 519322 TTGGCCAGCTCACCTCGATGCACTTCTACGGCTGGAAGAAGGGTCTCAAGACCGGTACC 519264
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353149121114
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |