Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq19 253 5e-62 >seq19 Length=580969 Score = 253 bits (280), Expect = 5e-62 Identities = 1152/1799 (64%), Gaps = 53/1799 (3%) Strand=Plus/Minus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450 ||||| | |||||| | ||| |||||||| || ||||| || | | | || Sbjct 521038 TTCGGCTTCAAGACGCTCGAGCGCTCCTACCTCCTCCGCATCAACGGCAAGGTCGCAGAG 520979 Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510 || || ||||| ||| | |||||||| || | |||||||| ||| ||| | || | Sbjct 520978 CGTCCCCAGCACATGCTCATGCGTGTCGCCGTCGGTATCCACGGCCAGGACATCGAGAGC 520919 Query 363511 GCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCACGCCAACAA 363568 || ||||| || || || || | || || ||| || || |||||| | || || Sbjct 520918 GCCATTGAGACCTACAACCTCAT--GTCGCAAAAGTACTTTACACACGCCTCCCCCACCC 520861 Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 | | ||| || || || | | || ||| | || || ||||| || | | ||||||| Sbjct 520860 TCTTCAACGCAGGTACCCCGCACCCTCAGCTCTCGTCGTGCTTCCTCGTCACCATGAAGG 520801 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 |||| || ||||| || |||| ||||| || |||| ||||| | || ||||||| | Sbjct 520800 ACGACTCGATCGATGGCATCTACGACACGCTCAAGACGTGTGCCATGATCTCCAAGACCG 520741 Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG-CACAGAACAGTT---ACATTCGC 363744 | || || || || | |||||| | || | ||| | ||| ||||| | Sbjct 520740 CCGGTGGTATCGGCCTCAACATCCACTGCATCCGCGGCACCG----GTTCCTACATTGCC 520685 Query 363745 GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCG 363804 || || || | || || | || |||||||| || || || |||| || || Sbjct 520684 GGTACCAACGGTGTCAGCAACGGTATCGTGCCCATGCTCCGCGTCTTCAACAACACCGCC 520625 Query 363805 AGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCT 363864 | ||||||||||||||||| ||||| || || ||||| || || | ||||| Sbjct 520624 CGCTACGTCGACCAGGGTGGCAACAAGCGTCCCGGTGCCTTTGCCATTTACGTTGAGCCA 520565 Query 363865 CATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTG 363924 || | || | |||||||| || || ||||| || ||| || || ||||| || Sbjct 520564 TGGCACTCGGACGTCTTTGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTG 520505 Query 363925 CGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAG 363984 ||||| || || || ||||| ||||| ||||| | || | || |||||| | || ||| Sbjct 520504 CGTGCCCGAGAGCTCTTCTACGCACTCTGGGTGCCCGATCTCTTCATGAAGAGGGTCGAG 520445 Query 363985 GCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATG 364043 ||| | | ||||| ||| | ||||| |||| || || || || | || | Sbjct 520444 -CAGAACGGCGACTGGTCGCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCTGACTGCTA 520386 Query 364044 GGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAG-- 364101 || ||||| | || || ||||| || || | ||||| || ||| Sbjct 520385 CGGCGACGAGTTTGAGCGCCTCTACGAGCGCTACGAGGCCGAGGGCCGTGCC---AAGCG 520329 Query 364102 -ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAAC 364160 || | || |||||||| |||| |||||| | || ||||||| ||||| || | Sbjct 520328 CACCGTCAAGGCCCAGAAGCTCTGGTACGCCATCCTCGAGTCGCAGACCGAGACCGGCAA 520269 Query 364161 ACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTAC 364220 |||| || | ||||| ||| | ||||||||| ||||||| || |||| || || Sbjct 520268 CCCCTTCATCCTCTACAAGGATGCCGCTAACCGCAAGAGCAACCAGAAGAACCTCGGCAC 520209 Query 364221 AATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGC 364280 || || |||| | || ||||||||||| || |||| ||| ||||||||| || Sbjct 520208 CATCAAGTGCTCCAACTTGTGCACCGAGATTATCGAGTACAGCGCCCCCGACGAGGTGGC 520149 Query 364281 CGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGT------ACTTT 364334 || || ||| | || |||||||| || || | || | | | || | Sbjct 520148 TGTCTGCAACTTGGCCTCGATCGCCCTCCCCACCTTCATCGACCCCGTCGCCAAGACGTA 520089 Query 364335 TGACCACCAGCATCTTTATGACGTAACCTAT--CATGCTACTTGCAATCTCGACAAGGTT 364392 ||| | | | ||| | || || || | ||| || | | || || ||||| | Sbjct 520088 CGACTTCAAACGTCTGCACGAGGTCGCCAAGGCCAT-CTGCAAG-AACCTTAACAAGATC 520031 Query 364393 ATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCG 364452 ||||||| || || || || | || ||| || || || ||||| || || || Sbjct 520030 ATCGACATCAACTACTACCCCGTCGAGGAGGCCCGTCGATCCAACATGCGCCACCGTCCC 519971 Query 364453 ATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGAT 364512 || ||| | ||||| ||||| || || |||| || ||||| | || ||||| Sbjct 519970 ATCGGTATCGGTGTCCAGGGTCTTGCCGACGCCTTCATGATCATGGGCTACGCCTTTGAG 519911 Query 364513 TCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAAT- 364571 || || || |||||| ||| || | | ||||| || || || || ||||| | Sbjct 519910 TCTCCCGAGGCTCGTCGTCTCAACGTGCATATCTTCGAGACCATCTACCACGCCGCTCTC 519851 Query 364572 GACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCC 364631 || | | |||| || |||| | | || | ||| || || | || || || Sbjct 519850 GAGCGAT-CGTGCGAGCTGGCTCAGCAGCACGGCACCTACGAGACCTACGCCGGCTCGCC 519792 Query 364632 TCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAA 364691 ||||||||| | | |||| || | ||| ||||| || || | || ||| | Sbjct 519791 CGCTTCGCAGGGTGAGCTGCAGTACGACATGTGGGC-GTCACCCCCTCGGACCTCTGGGA 519733 Query 364692 CTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGC 364751 ||||| ||| |||| | ||||| ||| |||||||| || | || Sbjct 519732 CTGGGCCGAGCTCAAGGCCAAGATCGCCAAGCACGGTCTGCGCAACTCGCTTCTGCTCGC 519673 Query 364752 GCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTT 364811 ||||||||||| || || || ||||||||||| ||||||||||||||| || | Sbjct 519672 TCCCATGCCCACCGCCTCGACCAGTCAGATCCTCGGCTTCAACGAGTGCTTCGAGCC--T 519615 Query 364812 TACAAG--CAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAG 364869 |||| | ||| | || || || || || || |||| || || | ||| || || Sbjct 519614 TACACGTCCAACATCTACTCGCGTCGTGTGCTCGCCGGTGAGTTCCAGGTGGTGAACCCT 519555 Query 364870 TACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATC 364929 | | || || || ||| | || |||||| |||| ||||||||| ||| Sbjct 519554 TGGTTGCTCCGCGAGCTCGTCGAGCAGGGTCTGTGGAACGACACGATGAAGAACCGCATC 519495 Query 364930 ATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGA--AGATC-TGAAGCCT 364986 ||||| ||||| | |||||| | || || | || || ||| ||||| Sbjct 519494 ATCGCTCACGGCGGTTCCATCCAGAACGTGCCCGGCATCCCCGACCGCATCAAGAAGC-- 519437 Query 364987 ATTTACAAAACCGTATGGGAAAT-TTCCATGCGAA--CTCTCATTGATATGGCGGCCGAT 365043 | ||||| ||||| ||||| || ||| ||| | |||| || ||||| ||||| Sbjct 519436 -TCTACAAGACCGTCTGGGAGATCAGCCA---GAAGGCCATCATCGACATGGCCGCCGAC 519381 Query 365044 CGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTC--AGCCAACCT 365101 || |||||||| ||||| ||| |||||| | ||| ||||| ||| ||| |||| Sbjct 519380 CGTGGTGCTTTCATCTGCCAGTCGCAGTCGCTCAAC--ATTCACCTCTCGGCGCCTACCT 519323 Query 365102 CCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGGTGCC 365160 | | |||| || || ||||| |||||||| ||||| ||||| ||||| ||| || Sbjct 519322 TTGGCCAGCTCACCTCGATGCACTTCTACGGCTGGAAGAAGGGTCTCAAGACCGGTACC 519264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353149121114