Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq19 232 6e-56
seq11 140 3e-28
seq8 134 1e-26
seq17 125 7e-24
seq1 102 8e-17
>seq19
Length=580969
Score = 232 bits (256), Expect = 6e-56
Identities = 949/1457 (65%), Gaps = 58/1457 (4%)
Strand=Plus/Plus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
|| || ||||| ||||| ||||| | |||||||||| | || | ||| |||||| | ||
Sbjct 519559 TTCACCACCTGGAACTCACCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGC 519618
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || ||||||| ||| ||||| ||| ||||| |||||||||||| || | |
Sbjct 519619 TCGAAGCACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGC 519678
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| | || |||||||| |||||||| ||| | |||| ||| |||| |||||
Sbjct 519679 AGAAGCGAGTTGCGCAGACCGTGCTTGGCGATCTTGGCCTTGAGCTCGGCCCAGTCCCAG 519738
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTC----GCTGGCGGG 145293
|| | || | ||| |||||||||||||||||| |||| || |||| |
Sbjct 519739 AGGTCCGAGGGGGTGACG-CCCACATGTCGTACTGCAGCTCACCCTGCGAAGCGGGCGAG 519797
Query 145294 GCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTG----GCGAGCTCGCAAC-TCGCC 145348
| || | ||| ||| |||| || || || |||||||| ||||
Sbjct 519798 CCGGCGT----AGGTCTCGTAGGTGCC----GTGCTGCTGAGCCAGCTCGCACGATCGC- 519848
Query 145349 TCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCG 145408
|| |||||| || || || |||||| || ||| |||||| | || ||
Sbjct 519849 TCGAGAGCGGCGTGGTAGATGGTCTCGAAGATATGCACGTTGAGACGACGAGCCTCGGGA 519908
Query 145409 CTCTCGTACGGCAT-GCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCC 145467
||| | ||| | || || | | || || ||||| || ||||| | || | ||
Sbjct 519909 GACTCAAA-GGCGTAGCCCATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATACC 519967
Query 145468 GATGGGCCGATGTTTCATGTTGCTCATCCTCG--CCGACTCGATAGGATATCGATTACGG 145525
|||||| || || ||||||| ||| || || ||||| || || || |
Sbjct 519968 GATGGGACGGTGGCGCATGTTGG--ATCGACGGGCCTCCTCGACGGGGTAGTAGTTGATG 520025
Query 145526 TCGATAATTTTATTCAAGTT-TCGCACTACTACCTTTGTAATGTGCCGCA-ACTTTTCAA 145583
||||| || || || | ||| | ||| | |||| | | | ||| || ||| ||
Sbjct 520026 TCGATGATCTTGTTAAGGTTCTTGCAG-ATGGCCTTGGCGACCTCGTGCAGACGTTTGAA 520084
Query 145584 AGTCAAACCGAGCCTCGTCAACGA---CCACACAGCTATTGACGGCGATCGACGCCAAAT 145640
||| || | || | | ||| | | || | || ||||||||| ||||| |
Sbjct 520085 -GTCGTAC---GTCTTGGCGACGGGGTCGATGAAGGTGGGGAGGGCGATCGAGGCCAAGT 520140
Query 145641 TACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTAC 145700
| || || ||| ||| |||| | ||||||| | | ||||||| |||||| ||| |
Sbjct 520141 TGCAGACAGCCACCTCGTCGGGGGCGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGC 520200
Query 145701 ATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCA 145760
| |||||||| || || || | ||| || || || | ||| || ||||||||||| |
Sbjct 520201 ACTTGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGA 520260
Query 145761 TGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCA-AG-TCCTGCGC 145818
|| | || ||| ||||| ||||| ||| | ||| || || || | ||| ||
Sbjct 520261 TGAAGGGGTTGCCGGTCTCGGTCTGCGACTCGAGGATGG--CGTACCAGAGCTTCTGGGC 520318
Query 145819 ACGCACC-TGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACG 145877
|| ||| ||| | |||||||| | ||||| | |||||| |||||||
Sbjct 520319 CTTGACGGTGCGCTTGGCA-CGGCCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCAAACT 520377
Query 145878 CGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGC 145937
|| |||||||| || | |||||||| |||| |||||| ||||| |||||||| |||
Sbjct 520378 CGTCGCCGTAGCAGTCAGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGC 520437
Query 145938 CGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGC 145997
|||| | ||| | || ||| || | ||| |||||||| || ||||| | | || |
Sbjct 520438 CGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTC 520497
Query 145998 GCGCTTTGCAA-TCCTCAGCACCCATGTT-TCGCTTCAAATTAAGCACACT-ATAGATGT 146054
| || ||| ||||| || ||| | || | | || | ||| | ||| ||
Sbjct 520498 GGGCAC-GCACCTCCTCCTTGCCGTGGTTCTTGCGG-AGGTCGAGGA-ACTCAAAGACGT 520554
Query 146055 CCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTTG---CCACCCTGGT 146111
||| |||||| || |||| || | ||| | ||| || || ||| ||||||||||
Sbjct 520555 CCGAGTGCCATGGCTCAACGTAAATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGT 520614
Query 146112 CCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGC 146171
| |||| || | ||||||| |||||||| | ||||||| ||| ||| || || |
Sbjct 520615 CGACGTAGCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGCACGATACCGTTGCTGACAC 520674
Query 146172 CGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGAC 146231
|||| ||| | || || ||| | ||| | ||| || | || | ||||| ||
Sbjct 520675 CGTTGGTACCGGCAATGTAGGAACCGGTGCCGCGGATGCAGTGGATGTTGAGGCCGATAC 520734
Query 146232 CGCCGCCGTACTTGGATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGCCGTCAATG 146290
| ||| || |||||| || ||| || ||| |||||| ||||||||||| || ||
Sbjct 520735 CACCGGCGGTCTTGGAGATCATGGCACACGTC-TTGAGCGTGTCGTAGATGCCATCGATC 520793
Query 146291 CTATCG--CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCG 146348
||| |||| ||| || || |||||||| | | ||| | ||| || || |
Sbjct 520794 GAGTCGTCCTTC--ATGGTGACGAGGAAGCACGACGAGAGCTGAGGGTGCGGGGTACCTG 520851
Query 146349 CCGAGAACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCGATACGTTT 146408
| ||| | || ||| ||||| ||||| ||| | ||| | || || |
Sbjct 520852 CGTTGAAGAGGGTGGGGGAGGCGTGTGTAAAGTACTTTTGCGACATGAGGTTGTAGGTCT 520911
Query 146409 CGATAGCG-TCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGT 146467
| || ||| ||| | ||||| | ||| || || || | ||||| ||||||||||||||
Sbjct 520912 CAATGGCGCTCTCG-ATGTCCTGGCCGTGGATACCGACGGCGACACGCATGAGCATGTGC 520970
Query 146468 TGGGGCCGCTCCGCCAC 146484
||||| ||||| || ||
Sbjct 520971 TGGGGACGCTCTGCGAC 520987
>seq11
Length=790822
Score = 140 bits (154), Expect = 3e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | || | |||||||||||| || ||||||||||||
Sbjct 631736 CCACCACGGAGACGGAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGAA 631677
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| ||||||||||| || |||| | ||||||||| || || |||
Sbjct 631676 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCAGGTGGG 631617
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||||| | || | ||| |||| ||||| |
Sbjct 631616 ATACCCTCCTTGTCTTGAATCTTGGCCTTGACGTTGTCGATAGTGTCGGAAGACTCCACC 631557
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGAC 131237
|||| ||| | || |||||||| ||||| || || || |||||||||||
Sbjct 631556 TCGAGGGTGATCGTCTTACCGGTCAGAGTCTTGACAAAGATCTGCATGAC 631507
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || |||| ||| || || | || | ||| |||||| ||||||||||| ||
Sbjct 632192 CCGCCACGCAGACGGAGGACGAGGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCCGAA 632133
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| |||||||| || || |||| || ||||||||||| ||||||
Sbjct 632132 AGAGTGCGACCATCCTCCAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCGGGAGGG 632073
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | |||||| | ||||||||
Sbjct 632072 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATAGTATCCGAGGACTCGACA 632013
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| |||| ||| || || || || || || || || || |||||
Sbjct 632012 TCGAGCGTAATGGTCTTGCCCGTGAGCGTCTTGACAAAGATTTGCAT 631966
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| |||||||| || || || | || | || |||||| ||||||||||| |||
Sbjct 631964 CCTCCGCGCAATCGAAGGACAAGGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGGAG 631905
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || |||||| |||||||| || ||| | || | ||||||||||| || |||
Sbjct 631904 AGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCAGGCGGG 631845
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || || | | || | || || | |||||||
Sbjct 631844 ATACCCTCCTTGTCCTGGATCTTGGCTTTCACATTGTCGATCGTGTCCGAAGACTCGACC 631785
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | || || || || || || || ||||||||||||||
Sbjct 631784 TCCAGTGTGATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 631738
>seq8
Length=837966
Score = 134 bits (148), Expect = 1e-26
Identities = 335/500 (67%), Gaps = 9/500 (2%)
Strand=Plus/Plus
Query 46100 AGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGTA 46159
||||| ||||||||||| || ||||||| | || ||| |||||||||||||||
Sbjct 244723 AGAAAGCCGACTGGGCGCTGCGATGGATCAGCGACAAGCGCGCCACTTTCGCCGAGCGTC 244782
Query 46160 TGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTT 46219
| || |||||||| || || ||| |||| || || ||| || ||| ||||||| |
Sbjct 244783 TCGTCGCCTTTGCCGCCGTTGAAGGCATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCT 244842
Query 46220 ACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGC 46278
|||| || | || | |||||||||| || || || ||||||||| || ||||||
Sbjct 244843 GGCTCAAGAAGCGCGGTC-TCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCGCGC 244901
Query 46279 GACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACAAG 46338
||||| || ||||| || |||||||| || ||| || || | | | || || |
Sbjct 244902 GACGAAGGTCTGCACACCGACTTTGCCTGCCTCCTCT---TCAGCCACCT-CAAGAAGCG 244957
Query 46339 CTTGCGCCC-GACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTT 46397
| | ||| ||||||||||| | || ||| | || || | ||| ||| ||||||
Sbjct 244958 CGCACACCCGGACACCGTGCTCAAAATCATCACCCAAGCCGTCGACATCGAGGTGGAGTT 245017
Query 46398 TTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCAC-AGTCAATGTGCGACT 46456
|| || | || | ||| | ||| || || ||| || | || | ||| | | |
Sbjct 245018 CTTGACTACTGCCATCCCCTGTCGCCTCCTCGGTATG-TCGAGCGAGGCCATGCACAAGT 245076
Query 46457 ACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCACG 46516
||||| ||| || || || || ||||||| ||| | ||| || | ||
Sbjct 245077 ACATCAAGTACGTCGCCGATCGCTTGCTCGTTTCGCTCGGAAATCCGGTTCACTACGGCG 245136
Query 46517 CGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTCG 46576
| || || || || || ||| | |||||||| |||| || || || || |||||||
Sbjct 245137 AGAGCTGCCCGTTCGATTTCATGCAGAACATCTCATTGGAAGGTAAGACCAACTTTTTCG 245196
Query 46577 AAAAGCGCGTCGGCGAGTAT 46596
| ||| |||| ||||||
Sbjct 245197 AGAAGAAGGTCGCAGAGTAT 245216
>seq17
Length=605135
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || || | ||||| || || || | ||||||||||| || |||||||| |||
Sbjct 221945 CCTCCACGGAGACGCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAA 222004
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| |||||| |||||||| ||||| |||| | |||||||| || || |||
Sbjct 222005 AGAGTGCGGCCGTCCTCGAGCTGCTTTCCTGCAAAGATAAGTCGCTGCTGATCGGGTGGG 222064
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| ||| || ||||| | || | || || | ||||||||
Sbjct 222065 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACC 222124
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | ||| || ||||| ||||| || || || ||||||||
Sbjct 222125 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTAACAAAGATCTGCAT 222171
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| || ||||| || || | |||||||||||| || |||||||| ||
Sbjct 300015 CCACCACGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 300074
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||| | |||||| |||||||| || ||| |||| | ||||||||||| || |||
Sbjct 300075 AGGGTGTGGCCGTCCTCAAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 300134
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || || | |||||||
Sbjct 300135 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCGACC 300194
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | ||| ||||| || || || || ||||| ||||||||
Sbjct 300195 TCGAGAGTGATGGTCTTACCCGTGAGGGTCTTAACGAAGATCTGCAT 300241
>seq1
Length=2009762
Score = 102 bits (112), Expect = 8e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||| || || | || | ||||||||||| || |||||||| ||
Sbjct 1808607 CCACCACGCAGACGGAGGACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 1808548
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| |||||| ||||||||||| ||| |||| | ||||||||||| || |||
Sbjct 1808547 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 1808488
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||||| | | | || || | |||||| |
Sbjct 1808487 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTTGATGGTGTCCGAGGACTCCACC 1808428
Query 131188 TCGACGGTAACGGTTTTACCGGTT 131211
|||| ||||| ||| ||||| |||
Sbjct 1808427 TCGAGGGTAATGGTCTTACCTGTT 1808404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012640695680
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