Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq19 232 6e-56 seq11 140 3e-28 seq8 134 1e-26 seq17 125 7e-24 seq1 102 8e-17 >seq19 Length=580969 Score = 232 bits (256), Expect = 6e-56 Identities = 949/1457 (65%), Gaps = 58/1457 (4%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 || || ||||| ||||| ||||| | |||||||||| | || | ||| |||||| | || Sbjct 519559 TTCACCACCTGGAACTCACCGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGC 519618 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || ||||||| ||| ||||| ||| ||||| |||||||||||| || | | Sbjct 519619 TCGAAGCACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGC 519678 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || |||||||| |||||||| ||| | |||| ||| |||| ||||| Sbjct 519679 AGAAGCGAGTTGCGCAGACCGTGCTTGGCGATCTTGGCCTTGAGCTCGGCCCAGTCCCAG 519738 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTC----GCTGGCGGG 145293 || | || | ||| |||||||||||||||||| |||| || |||| | Sbjct 519739 AGGTCCGAGGGGGTGACG-CCCACATGTCGTACTGCAGCTCACCCTGCGAAGCGGGCGAG 519797 Query 145294 GCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTG----GCGAGCTCGCAAC-TCGCC 145348 | || | ||| ||| |||| || || || |||||||| |||| Sbjct 519798 CCGGCGT----AGGTCTCGTAGGTGCC----GTGCTGCTGAGCCAGCTCGCACGATCGC- 519848 Query 145349 TCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCG 145408 || |||||| || || || |||||| || ||| |||||| | || || Sbjct 519849 TCGAGAGCGGCGTGGTAGATGGTCTCGAAGATATGCACGTTGAGACGACGAGCCTCGGGA 519908 Query 145409 CTCTCGTACGGCAT-GCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCC 145467 ||| | ||| | || || | | || || ||||| || ||||| | || | || Sbjct 519909 GACTCAAA-GGCGTAGCCCATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATACC 519967 Query 145468 GATGGGCCGATGTTTCATGTTGCTCATCCTCG--CCGACTCGATAGGATATCGATTACGG 145525 |||||| || || ||||||| ||| || || ||||| || || || | Sbjct 519968 GATGGGACGGTGGCGCATGTTGG--ATCGACGGGCCTCCTCGACGGGGTAGTAGTTGATG 520025 Query 145526 TCGATAATTTTATTCAAGTT-TCGCACTACTACCTTTGTAATGTGCCGCA-ACTTTTCAA 145583 ||||| || || || | ||| | ||| | |||| | | | ||| || ||| || Sbjct 520026 TCGATGATCTTGTTAAGGTTCTTGCAG-ATGGCCTTGGCGACCTCGTGCAGACGTTTGAA 520084 Query 145584 AGTCAAACCGAGCCTCGTCAACGA---CCACACAGCTATTGACGGCGATCGACGCCAAAT 145640 ||| || | || | | ||| | | || | || ||||||||| ||||| | Sbjct 520085 -GTCGTAC---GTCTTGGCGACGGGGTCGATGAAGGTGGGGAGGGCGATCGAGGCCAAGT 520140 Query 145641 TACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTAC 145700 | || || ||| ||| |||| | ||||||| | | ||||||| |||||| ||| | Sbjct 520141 TGCAGACAGCCACCTCGTCGGGGGCGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGC 520200 Query 145701 ATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCA 145760 | |||||||| || || || | ||| || || || | ||| || ||||||||||| | Sbjct 520201 ACTTGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGA 520260 Query 145761 TGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCA-AG-TCCTGCGC 145818 || | || ||| ||||| ||||| ||| | ||| || || || | ||| || Sbjct 520261 TGAAGGGGTTGCCGGTCTCGGTCTGCGACTCGAGGATGG--CGTACCAGAGCTTCTGGGC 520318 Query 145819 ACGCACC-TGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACG 145877 || ||| ||| | |||||||| | ||||| | |||||| ||||||| Sbjct 520319 CTTGACGGTGCGCTTGGCA-CGGCCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCAAACT 520377 Query 145878 CGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGC 145937 || |||||||| || | |||||||| |||| |||||| ||||| |||||||| ||| Sbjct 520378 CGTCGCCGTAGCAGTCAGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGC 520437 Query 145938 CGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGC 145997 |||| | ||| | || ||| || | ||| |||||||| || ||||| | | || | Sbjct 520438 CGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTC 520497 Query 145998 GCGCTTTGCAA-TCCTCAGCACCCATGTT-TCGCTTCAAATTAAGCACACT-ATAGATGT 146054 | || ||| ||||| || ||| | || | | || | ||| | ||| || Sbjct 520498 GGGCAC-GCACCTCCTCCTTGCCGTGGTTCTTGCGG-AGGTCGAGGA-ACTCAAAGACGT 520554 Query 146055 CCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTTG---CCACCCTGGT 146111 ||| |||||| || |||| || | ||| | ||| || || ||| |||||||||| Sbjct 520555 CCGAGTGCCATGGCTCAACGTAAATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGT 520614 Query 146112 CCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGC 146171 | |||| || | ||||||| |||||||| | ||||||| ||| ||| || || | Sbjct 520615 CGACGTAGCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGCACGATACCGTTGCTGACAC 520674 Query 146172 CGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGAC 146231 |||| ||| | || || ||| | ||| | ||| || | || | ||||| || Sbjct 520675 CGTTGGTACCGGCAATGTAGGAACCGGTGCCGCGGATGCAGTGGATGTTGAGGCCGATAC 520734 Query 146232 CGCCGCCGTACTTGGATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGCCGTCAATG 146290 | ||| || |||||| || ||| || ||| |||||| ||||||||||| || || Sbjct 520735 CACCGGCGGTCTTGGAGATCATGGCACACGTC-TTGAGCGTGTCGTAGATGCCATCGATC 520793 Query 146291 CTATCG--CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCG 146348 ||| |||| ||| || || |||||||| | | ||| | ||| || || | Sbjct 520794 GAGTCGTCCTTC--ATGGTGACGAGGAAGCACGACGAGAGCTGAGGGTGCGGGGTACCTG 520851 Query 146349 CCGAGAACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCGATACGTTT 146408 | ||| | || ||| ||||| ||||| ||| | ||| | || || | Sbjct 520852 CGTTGAAGAGGGTGGGGGAGGCGTGTGTAAAGTACTTTTGCGACATGAGGTTGTAGGTCT 520911 Query 146409 CGATAGCG-TCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGT 146467 | || ||| ||| | ||||| | ||| || || || | ||||| |||||||||||||| Sbjct 520912 CAATGGCGCTCTCG-ATGTCCTGGCCGTGGATACCGACGGCGACACGCATGAGCATGTGC 520970 Query 146468 TGGGGCCGCTCCGCCAC 146484 ||||| ||||| || || Sbjct 520971 TGGGGACGCTCTGCGAC 520987 >seq11 Length=790822 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | |||||||||||| || |||||||||||| Sbjct 631736 CCACCACGGAGACGGAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGAA 631677 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| || |||| | ||||||||| || || ||| Sbjct 631676 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCAGGTGGG 631617 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | ||| |||| ||||| | Sbjct 631616 ATACCCTCCTTGTCTTGAATCTTGGCCTTGACGTTGTCGATAGTGTCGGAAGACTCCACC 631557 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGAC 131237 |||| ||| | || |||||||| ||||| || || || ||||||||||| Sbjct 631556 TCGAGGGTGATCGTCTTACCGGTCAGAGTCTTGACAAAGATCTGCATGAC 631507 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| ||| || || | || | ||| |||||| ||||||||||| || Sbjct 632192 CCGCCACGCAGACGGAGGACGAGGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCCGAA 632133 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| |||||||| || || |||| || ||||||||||| |||||| Sbjct 632132 AGAGTGCGACCATCCTCCAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCGGGAGGG 632073 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | |||||| | |||||||| Sbjct 632072 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATAGTATCCGAGGACTCGACA 632013 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| ||| || || || || || || || || || ||||| Sbjct 632012 TCGAGCGTAATGGTCTTGCCCGTGAGCGTCTTGACAAAGATTTGCAT 631966 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || |||||||| || || || | || | || |||||| ||||||||||| ||| Sbjct 631964 CCTCCGCGCAATCGAAGGACAAGGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGGAG 631905 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| |||||||| || ||| | || | ||||||||||| || ||| Sbjct 631904 AGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCAGGCGGG 631845 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || || | | || | || || | ||||||| Sbjct 631844 ATACCCTCCTTGTCCTGGATCTTGGCTTTCACATTGTCGATCGTGTCCGAAGACTCGACC 631785 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || || || || || |||||||||||||| Sbjct 631784 TCCAGTGTGATCGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 631738 >seq8 Length=837966 Score = 134 bits (148), Expect = 1e-26 Identities = 335/500 (67%), Gaps = 9/500 (2%) Strand=Plus/Plus Query 46100 AGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGTA 46159 ||||| ||||||||||| || ||||||| | || ||| ||||||||||||||| Sbjct 244723 AGAAAGCCGACTGGGCGCTGCGATGGATCAGCGACAAGCGCGCCACTTTCGCCGAGCGTC 244782 Query 46160 TGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTT 46219 | || |||||||| || || ||| |||| || || ||| || ||| ||||||| | Sbjct 244783 TCGTCGCCTTTGCCGCCGTTGAAGGCATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCT 244842 Query 46220 ACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGC 46278 |||| || | || | |||||||||| || || || ||||||||| || |||||| Sbjct 244843 GGCTCAAGAAGCGCGGTC-TCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCGCGC 244901 Query 46279 GACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACAAG 46338 ||||| || ||||| || |||||||| || ||| || || | | | || || | Sbjct 244902 GACGAAGGTCTGCACACCGACTTTGCCTGCCTCCTCT---TCAGCCACCT-CAAGAAGCG 244957 Query 46339 CTTGCGCCC-GACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTT 46397 | | ||| ||||||||||| | || ||| | || || | ||| ||| |||||| Sbjct 244958 CGCACACCCGGACACCGTGCTCAAAATCATCACCCAAGCCGTCGACATCGAGGTGGAGTT 245017 Query 46398 TTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCAC-AGTCAATGTGCGACT 46456 || || | || | ||| | ||| || || ||| || | || | ||| | | | Sbjct 245018 CTTGACTACTGCCATCCCCTGTCGCCTCCTCGGTATG-TCGAGCGAGGCCATGCACAAGT 245076 Query 46457 ACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCACG 46516 ||||| ||| || || || || ||||||| ||| | ||| || | || Sbjct 245077 ACATCAAGTACGTCGCCGATCGCTTGCTCGTTTCGCTCGGAAATCCGGTTCACTACGGCG 245136 Query 46517 CGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTCG 46576 | || || || || || ||| | |||||||| |||| || || || || ||||||| Sbjct 245137 AGAGCTGCCCGTTCGATTTCATGCAGAACATCTCATTGGAAGGTAAGACCAACTTTTTCG 245196 Query 46577 AAAAGCGCGTCGGCGAGTAT 46596 | ||| |||| |||||| Sbjct 245197 AGAAGAAGGTCGCAGAGTAT 245216 >seq17 Length=605135 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||||| || || || | ||||||||||| || |||||||| ||| Sbjct 221945 CCTCCACGGAGACGCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAA 222004 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| |||||||| ||||| |||| | |||||||| || || ||| Sbjct 222005 AGAGTGCGGCCGTCCTCGAGCTGCTTTCCTGCAAAGATAAGTCGCTGCTGATCGGGTGGG 222064 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | || | || || | |||||||| Sbjct 222065 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACC 222124 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || ||||| ||||| || || || |||||||| Sbjct 222125 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTAACAAAGATCTGCAT 222171 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| || || | |||||||||||| || |||||||| || Sbjct 300015 CCACCACGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 300074 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||| | |||||| |||||||| || ||| |||| | ||||||||||| || ||| Sbjct 300075 AGGGTGTGGCCGTCCTCAAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 300134 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | ||||||| Sbjct 300135 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCGACC 300194 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| ||||| || || || || ||||| |||||||| Sbjct 300195 TCGAGAGTGATGGTCTTACCCGTGAGGGTCTTAACGAAGATCTGCAT 300241 >seq1 Length=2009762 Score = 102 bits (112), Expect = 8e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | || | ||||||||||| || |||||||| || Sbjct 1808607 CCACCACGCAGACGGAGGACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 1808548 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| ||| |||| | ||||||||||| || ||| Sbjct 1808547 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 1808488 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | | | || || | |||||| | Sbjct 1808487 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTTGATGGTGTCCGAGGACTCCACC 1808428 Query 131188 TCGACGGTAACGGTTTTACCGGTT 131211 |||| ||||| ||| ||||| ||| Sbjct 1808427 TCGAGGGTAATGGTCTTACCTGTT 1808404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012640695680