Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05-
20] 27 sequences; 20,067,589 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq8 210 2e-49
>seq8
Length=837966
Score = 210 bits (232), Expect = 2e-49
Identities = 384/559 (69%), Gaps = 5/559 (1%)
Strand=Plus/Minus
Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150
||| ||||||||||| || | ||||||||| || || || | ||| ||| ||| || |
Sbjct 244931 GCAGGCAAAGTCGGTGTGCAGACCTTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAG 244872
Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210
||| || | || || || ||||||||||| || || || || || || || || ||
Sbjct 244871 ACCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAA 244812
Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270
|| ||||| ||||| ||||| || || | ||| ||||| ||| | ||| || |||
Sbjct 244811 GATGCCTTCAACGGCGGCAAAGGCGACGAGACGCTCGGCGAAAGTGGCGCGCTTGTCGCT 244752
Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTT 93330
||||||| | ||||| |||||||| | ||| | || | || |||| ||||
Sbjct 244751 GATCCATCGCAGCGCCCAGTCGGCTTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTC 244692
Query 93331 AAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACAT 93390
||| ||| || |||| || | || || ||||| || ||||| | || || || |
Sbjct 244691 AAAGAGGAGCTCGCGCTGCTCGGGCTCGCGAATGTAGGTGTCGATGAGGAGCGAGTAGGT 244632
Query 93391 TTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGAT 93450
|| || |||| |||||||| || ||||| |||||||| || | ||| || | |
Sbjct 244631 CTCCGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGAGCCTCGGCGGC 244572
Query 93451 CTGCACTTCTTGAG-AAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTG 93509
||||| || ||| || | ||| ||||| || || ||||| ||||| ||||| || |
Sbjct 244571 TTGCACCTC-GGAGCTGAAACGCTCGACGAGGTTCTCGTTGACGATACCGTCGGAAGCGG 244513
Query 93510 CaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGC---TTATCCC 93566
| || || || | | ||| ||||| || || | || || ||| || ||||
Sbjct 244512 CGAAGAAGGCGAGGACGTGCGAGATAAAGTGGCGTTCGTTGTCGTTGAGCTTGTTGTCCC 244453
Query 93567 AATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTT 93626
| ||| ||||| || ||||| |||| |||||| | ||||| || || || || || |
Sbjct 244452 AGTCGTGGAGATCCTTGGAAAGGTCGATCTCTTCGGCGGTCCAGAAGGAAGCCTCGGCCT 244393
Query 93627 TTTTGTACATATCCCATAT 93645
|||||||||| | ||| ||
Sbjct 244392 TTTTGTACATTTGCCAGAT 244374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860612059480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |